RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TNRC18O15417 2968 aaPredicted RBP4.6□□□□□ -1.67
VCAN-202ENST00000342785 IGLV5-37A0A075B6J1 123 aa4.6□□□□□ -1.67
VCAN-202ENST00000342785 CNBPP62633 177 aaKnown RBP4.6□□□□□ -1.67
VCAN-202ENST00000342785 SPTBN5Q9NRC6 3674 aaKnown RBP4.6□□□□□ -1.67
VCAN-202ENST00000342785 HRNRQ86YZ3 2850 aaPredicted RBP4.59□□□□□ -1.67
VCAN-202ENST00000342785 FBN2P35556 2912 aa4.59□□□□□ -1.68
VCAN-202ENST00000342785 SPAG11AQ6PDA7 123 aa4.59□□□□□ -1.68
VCAN-202ENST00000342785 APLNQ9ULZ1 77 aa4.58□□□□□ -1.68
VCAN-202ENST00000342785 A0A087WTM6 91 aa4.58□□□□□ -1.68
VCAN-202ENST00000342785 K7ERS5 55 aa4.58□□□□□ -1.68
VCAN-202ENST00000342785 A8MUN3 132 aa4.58□□□□□ -1.68
VCAN-202ENST00000342785 MRPL34Q9BQ48 92 aaKnown RBP4.58□□□□□ -1.68
VCAN-202ENST00000342785 OCR1Q9BZK8 76 aa4.58□□□□□ -1.68
VCAN-202ENST00000342785 LINC00336Q6ZUF6 198 aa4.57□□□□□ -1.68
VCAN-202ENST00000342785 C8orf17Q9NRJ1 99 aa4.57□□□□□ -1.68
VCAN-202ENST00000342785 ANAPC11Q9NYG5 84 aa4.57□□□□□ -1.68
VCAN-202ENST00000342785 ZNF861PO60384 105 aa4.57□□□□□ -1.68
VCAN-202ENST00000342785 DSCR10P59022 87 aa4.56□□□□□ -1.68
VCAN-202ENST00000342785 CYSTM1Q9H1C7 97 aa4.56□□□□□ -1.68
VCAN-202ENST00000342785 MYO15AQ9UKN7 3530 aa4.56□□□□□ -1.68
VCAN-202ENST00000342785 ACYP2P14621 99 aa4.56□□□□□ -1.68
VCAN-202ENST00000342785 SPRR4Q96PI1 79 aa4.56□□□□□ -1.68
VCAN-202ENST00000342785 LOC101927531A0A1B0GV80 90 aa4.55□□□□□ -1.68
VCAN-202ENST00000342785 LINC00313P59037 77 aa4.55□□□□□ -1.68
VCAN-202ENST00000342785 CRYBG3Q68DQ2 2970 aa4.55□□□□□ -1.68
VCAN-202ENST00000342785 SPRR1AP35321 89 aa4.54□□□□□ -1.68
VCAN-202ENST00000342785 KRTAP26-1Q6PEX3 210 aa4.54□□□□□ -1.68
VCAN-202ENST00000342785 PSORS1C2Q9UIG4 136 aa4.54□□□□□ -1.68
VCAN-202ENST00000342785 TENM4Q6N022 2769 aa4.54□□□□□ -1.68
VCAN-202ENST00000342785 A0A1B0GVX0 72 aa4.54□□□□□ -1.68
VCAN-202ENST00000342785 COA5Q86WW8 74 aa4.54□□□□□ -1.68
VCAN-202ENST00000342785 FAM229AH3BQW9 127 aa4.54□□□□□ -1.68
VCAN-202ENST00000342785 SSBP3-AS1Q7Z2R9 100 aa4.54□□□□□ -1.68
VCAN-202ENST00000342785 A0A1B0GU69 56 aa4.52□□□□□ -1.69
VCAN-202ENST00000342785 MXRA5Q9NR99 2828 aa4.52□□□□□ -1.69
VCAN-202ENST00000342785 C8orf87E5RJ46 101 aa4.52□□□□□ -1.69
VCAN-202ENST00000342785 TYMSOSQ8TAI1 123 aa4.52□□□□□ -1.69
VCAN-202ENST00000342785 WWC2-AS2Q96NR7 200 aa4.52□□□□□ -1.69
VCAN-202ENST00000342785 PLA2G1BP04054 148 aaKnown RBP4.51□□□□□ -1.69
VCAN-202ENST00000342785 C7orf65Q6ZTY9 151 aa4.51□□□□□ -1.69
VCAN-202ENST00000342785 USP34Q70CQ2 3546 aa4.51□□□□□ -1.69
VCAN-202ENST00000342785 IGLV7-43P04211 117 aa4.5□□□□□ -1.69
VCAN-202ENST00000342785 KRTAP1-5Q9BYS1 174 aa4.49□□□□□ -1.69
VCAN-202ENST00000342785 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.49□□□□□ -1.69
VCAN-202ENST00000342785 CYP4F30PQ9H0H9 118 aa4.48□□□□□ -1.69
VCAN-202ENST00000342785 Q96NJ1 140 aa4.48□□□□□ -1.69
VCAN-202ENST00000342785 SPANXA2-OT1Q8N9U9 137 aa4.47□□□□□ -1.69
VCAN-202ENST00000342785 ATP11AUNQ6ZP68 121 aa4.46□□□□□ -1.7
VCAN-202ENST00000342785 SPRR1BP22528 89 aa4.45□□□□□ -1.7
VCAN-202ENST00000342785 TNP2Q05952 138 aa4.45□□□□□ -1.7
VCAN-202ENST00000342785 IGLV8-61A0A075B6I0 122 aa4.45□□□□□ -1.7
VCAN-202ENST00000342785 FP248Q71RG6 208 aaPredicted RBP4.44□□□□□ -1.7
VCAN-202ENST00000342785 Q5XG85 94 aa4.44□□□□□ -1.7
VCAN-202ENST00000342785 KRTAP4-16G5E9R7 235 aaPredicted RBP4.44□□□□□ -1.7
VCAN-202ENST00000342785 OXTP01178 125 aa4.43□□□□□ -1.7
VCAN-202ENST00000342785 PRR26Q8N8Z3 221 aa4.43□□□□□ -1.7
VCAN-202ENST00000342785 MMP24-AS1A0A0U1RRL7 71 aa4.43□□□□□ -1.7
VCAN-202ENST00000342785 LINC00472Q9H8W2 130 aa4.43□□□□□ -1.7
VCAN-202ENST00000342785 DCHS1Q96JQ0 3298 aa4.42□□□□□ -1.7
VCAN-202ENST00000342785 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
VCAN-202ENST00000342785 SMR3BP02814 79 aaPredicted RBP4.41□□□□□ -1.7
VCAN-202ENST00000342785 LINC00304Q8N9R0 145 aa4.41□□□□□ -1.7
VCAN-202ENST00000342785 UQCR11O14957 56 aa4.4□□□□□ -1.7
VCAN-202ENST00000342785 Q1T7F1 81 aa4.4□□□□□ -1.7
VCAN-202ENST00000342785 IGLV7-46A0A075B6I9 117 aa4.4□□□□□ -1.71
VCAN-202ENST00000342785 FAM229BQ4G0N7 80 aa4.4□□□□□ -1.71
VCAN-202ENST00000342785 RELNP78509 3460 aa4.4□□□□□ -1.71
VCAN-202ENST00000342785 PLAC8Q9NZF1 115 aa4.39□□□□□ -1.71
VCAN-202ENST00000342785 TENM3Q9P273 2699 aa4.39□□□□□ -1.71
VCAN-202ENST00000342785 CD164Q04900 197 aa4.38□□□□□ -1.71
VCAN-202ENST00000342785 FLG2Q5D862 2391 aaPredicted RBP4.37□□□□□ -1.71
VCAN-202ENST00000342785 MUC3AQ02505 3323 aa4.37□□□□□ -1.71
VCAN-202ENST00000342785 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
VCAN-202ENST00000342785 PANO1I0J062 215 aa4.37□□□□□ -1.71
VCAN-202ENST00000342785 C9orf92A6NGG3 77 aa4.36□□□□□ -1.71
VCAN-202ENST00000342785 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
VCAN-202ENST00000342785 KRTAP7-1Q8IUC3 87 aa4.35□□□□□ -1.71
VCAN-202ENST00000342785 HRES1P13985 223 aa4.35□□□□□ -1.71
VCAN-202ENST00000342785 Q8N1X5 172 aa4.34□□□□□ -1.71
VCAN-202ENST00000342785 TENM1Q9UKZ4 2725 aa4.34□□□□□ -1.71
VCAN-202ENST00000342785 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.72
VCAN-202ENST00000342785 WDFY3Q8IZQ1 3526 aa4.34□□□□□ -1.72
VCAN-202ENST00000342785 KRTAP29-1A8MX34 341 aaPredicted RBP4.33□□□□□ -1.72
VCAN-202ENST00000342785 CELSR1Q9NYQ6 3014 aa4.33□□□□□ -1.72
VCAN-202ENST00000342785 KRTAP11-1Q8IUC1 163 aa4.31□□□□□ -1.72
VCAN-202ENST00000342785 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
VCAN-202ENST00000342785 PDZD2O15018 2839 aa4.31□□□□□ -1.72
VCAN-202ENST00000342785 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
VCAN-202ENST00000342785 LAMA5O15230 3695 aa4.31□□□□□ -1.72
VCAN-202ENST00000342785 LINC01558Q9Y6Z2 57 aa4.31□□□□□ -1.72
VCAN-202ENST00000342785 VWFP04275 2813 aa4.3□□□□□ -1.72
VCAN-202ENST00000342785 ASPMQ8IZT6 3477 aa4.3□□□□□ -1.72
VCAN-202ENST00000342785 Q75L30 129 aa4.3□□□□□ -1.72
VCAN-202ENST00000342785 Q5VV11 94 aa4.29□□□□□ -1.72
VCAN-202ENST00000342785 LINC00483Q53H64 154 aa4.28□□□□□ -1.72
VCAN-202ENST00000342785 Q5W150 140 aa4.28□□□□□ -1.72
VCAN-202ENST00000342785 Q6ZR54 194 aa4.28□□□□□ -1.72
VCAN-202ENST00000342785 FBN1P35555 2871 aaKnown RBP4.27□□□□□ -1.73
VCAN-202ENST00000342785 KRTAP10-2P60368 255 aa4.27□□□□□ -1.73
VCAN-202ENST00000342785 Q6ZRN7 208 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms