RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 SPRR4Q96PI1 79 aa9.94□□□□□ -0.82
CARMIL3-201ENST00000342740 ZANQ9Y493 2812 aa9.94□□□□□ -0.82
CARMIL3-201ENST00000342740 HIVEP1P15822 2718 aa9.94□□□□□ -0.82
CARMIL3-201ENST00000342740 SMR3BP02814 79 aaPredicted RBP9.94□□□□□ -0.82
CARMIL3-201ENST00000342740 ACYP2P14621 99 aa9.94□□□□□ -0.82
CARMIL3-201ENST00000342740 IGLV5-48A0A075B6I7 105 aa9.93□□□□□ -0.82
CARMIL3-201ENST00000342740 LINC01600Q96MT4 127 aa9.93□□□□□ -0.82
CARMIL3-201ENST00000342740 OBSCN-AS1Q96MR7 158 aa9.93□□□□□ -0.82
CARMIL3-201ENST00000342740 C8orf17Q9NRJ1 99 aa9.92□□□□□ -0.82
CARMIL3-201ENST00000342740 APCP25054 2843 aa9.91□□□□□ -0.82
CARMIL3-201ENST00000342740 TNP2Q05952 138 aa9.91□□□□□ -0.82
CARMIL3-201ENST00000342740 PMAIP1Q13794 54 aa9.9□□□□□ -0.82
CARMIL3-201ENST00000342740 LOC400499M0QZD8 3231 aa9.9□□□□□ -0.82
CARMIL3-201ENST00000342740 ASH1LQ9NR48 2969 aaKnown RBP9.9□□□□□ -0.82
CARMIL3-201ENST00000342740 LOC101927531A0A1B0GV80 90 aa9.89□□□□□ -0.83
CARMIL3-201ENST00000342740 Q8NDZ9 215 aa9.89□□□□□ -0.83
CARMIL3-201ENST00000342740 A0A1B0GVX0 72 aa9.89□□□□□ -0.83
CARMIL3-201ENST00000342740 STAB2Q8WWQ8 2551 aa9.88□□□□□ -0.83
CARMIL3-201ENST00000342740 C1orf195Q5TG92 126 aa9.87□□□□□ -0.83
CARMIL3-201ENST00000342740 LINC00304Q8N9R0 145 aa9.87□□□□□ -0.83
CARMIL3-201ENST00000342740 DSCR10P59022 87 aa9.87□□□□□ -0.83
CARMIL3-201ENST00000342740 SPAG11AQ6PDA7 123 aa9.87□□□□□ -0.83
CARMIL3-201ENST00000342740 KLKP1Q107X0 134 aa9.86□□□□□ -0.83
CARMIL3-201ENST00000342740 LINC00336Q6ZUF6 198 aa9.86□□□□□ -0.83
CARMIL3-201ENST00000342740 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.86□□□□□ -0.83
CARMIL3-201ENST00000342740 USP34Q70CQ2 3546 aa9.85□□□□□ -0.83
CARMIL3-201ENST00000342740 A0A1B0GU69 56 aa9.83□□□□□ -0.84
CARMIL3-201ENST00000342740 CELSR2Q9HCU4 2923 aa9.83□□□□□ -0.84
CARMIL3-201ENST00000342740 NIPBLQ6KC79 2804 aaeCLIP9.82□□□□□ -0.84
CARMIL3-201ENST00000342740 C4orf26Q17RF5 130 aa9.81□□□□□ -0.84
CARMIL3-201ENST00000342740 ATP11AUNQ6ZP68 121 aa9.8□□□□□ -0.84
CARMIL3-201ENST00000342740 KRTAP1-5Q9BYS1 174 aa9.79□□□□□ -0.84
CARMIL3-201ENST00000342740 KRTAP26-1Q6PEX3 210 aa9.78□□□□□ -0.84
CARMIL3-201ENST00000342740 H7BZZ5 65 aa9.76□□□□□ -0.85
CARMIL3-201ENST00000342740 SPRR1AP35321 89 aa9.76□□□□□ -0.85
CARMIL3-201ENST00000342740 KMT2BQ9UMN6 2715 aaPredicted RBP9.75□□□□□ -0.85
CARMIL3-201ENST00000342740 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
CARMIL3-201ENST00000342740 COA5Q86WW8 74 aa9.73□□□□□ -0.85
CARMIL3-201ENST00000342740 MYO15AQ9UKN7 3530 aa9.72□□□□□ -0.85
CARMIL3-201ENST00000342740 PRO0628Q9UI54 55 aa9.71□□□□□ -0.85
CARMIL3-201ENST00000342740 NF1P21359 2839 aa9.7□□□□□ -0.86
CARMIL3-201ENST00000342740 HRNRQ86YZ3 2850 aaPredicted RBP9.7□□□□□ -0.86
CARMIL3-201ENST00000342740 J3QL48 77 aa9.7□□□□□ -0.86
CARMIL3-201ENST00000342740 DCHS2Q6V1P9 2916 aa9.7□□□□□ -0.86
CARMIL3-201ENST00000342740 TENM4Q6N022 2769 aa9.69□□□□□ -0.86
CARMIL3-201ENST00000342740 PLAC8Q9NZF1 115 aa9.68□□□□□ -0.86
CARMIL3-201ENST00000342740 IGLV8-61A0A075B6I0 122 aa9.66□□□□□ -0.86
CARMIL3-201ENST00000342740 OCR1Q9BZK8 76 aa9.66□□□□□ -0.86
CARMIL3-201ENST00000342740 A8MUN3 132 aa9.65□□□□□ -0.86
CARMIL3-201ENST00000342740 CRYBG3Q68DQ2 2970 aa9.65□□□□□ -0.87
CARMIL3-201ENST00000342740 CD164Q04900 197 aa9.63□□□□□ -0.87
CARMIL3-201ENST00000342740 FBN2P35556 2912 aa9.62□□□□□ -0.87
CARMIL3-201ENST00000342740 PRR26Q8N8Z3 221 aa9.6□□□□□ -0.87
CARMIL3-201ENST00000342740 SPRR1BP22528 89 aa9.59□□□□□ -0.87
CARMIL3-201ENST00000342740 FAM229BQ4G0N7 80 aa9.56□□□□□ -0.88
CARMIL3-201ENST00000342740 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
CARMIL3-201ENST00000342740 CYP4F30PQ9H0H9 118 aa9.53□□□□□ -0.88
CARMIL3-201ENST00000342740 UQCR11O14957 56 aa9.49□□□□□ -0.89
CARMIL3-201ENST00000342740 MMP24-AS1A0A0U1RRL7 71 aa9.49□□□□□ -0.89
CARMIL3-201ENST00000342740 LINC00472Q9H8W2 130 aa9.49□□□□□ -0.89
CARMIL3-201ENST00000342740 PANO1I0J062 215 aa9.48□□□□□ -0.89
CARMIL3-201ENST00000342740 KRTAP10-2P60368 255 aa9.48□□□□□ -0.89
CARMIL3-201ENST00000342740 Q8N1X5 172 aa9.48□□□□□ -0.89
CARMIL3-201ENST00000342740 KRTAP4-16G5E9R7 235 aaPredicted RBP9.47□□□□□ -0.89
CARMIL3-201ENST00000342740 KRTAP10-1P60331 282 aa9.46□□□□□ -0.9
CARMIL3-201ENST00000342740 Q6ZR54 194 aa9.45□□□□□ -0.9
CARMIL3-201ENST00000342740 COX6B2Q6YFQ2 88 aa9.44□□□□□ -0.9
CARMIL3-201ENST00000342740 MXRA5Q9NR99 2828 aa9.44□□□□□ -0.9
CARMIL3-201ENST00000342740 RELNP78509 3460 aa9.42□□□□□ -0.9
CARMIL3-201ENST00000342740 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
CARMIL3-201ENST00000342740 LCE6AA0A183 80 aa9.4□□□□□ -0.9
CARMIL3-201ENST00000342740 DCHS1Q96JQ0 3298 aa9.39□□□□□ -0.91
CARMIL3-201ENST00000342740 IGLV7-46A0A075B6I9 117 aa9.39□□□□□ -0.91
CARMIL3-201ENST00000342740 MIR22HGQ0VDD5 57 aa9.37□□□□□ -0.91
CARMIL3-201ENST00000342740 CYSTM1Q9H1C7 97 aa9.37□□□□□ -0.91
CARMIL3-201ENST00000342740 FLG2Q5D862 2391 aaPredicted RBP9.37□□□□□ -0.91
CARMIL3-201ENST00000342740 MUC3AQ02505 3323 aa9.37□□□□□ -0.91
CARMIL3-201ENST00000342740 HRES1P13985 223 aa9.36□□□□□ -0.91
CARMIL3-201ENST00000342740 RBM12B-AS1Q9P1G2 102 aa9.36□□□□□ -0.91
CARMIL3-201ENST00000342740 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
CARMIL3-201ENST00000342740 LINC00483Q53H64 154 aa9.33□□□□□ -0.92
CARMIL3-201ENST00000342740 WDFY3Q8IZQ1 3526 aa9.32□□□□□ -0.92
CARMIL3-201ENST00000342740 Q6ZRN7 208 aaPredicted RBP9.32□□□□□ -0.92
CARMIL3-201ENST00000342740 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
CARMIL3-201ENST00000342740 LAMA5O15230 3695 aa9.29□□□□□ -0.92
CARMIL3-201ENST00000342740 KRTAP11-1Q8IUC1 163 aa9.28□□□□□ -0.92
CARMIL3-201ENST00000342740 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
CARMIL3-201ENST00000342740 Q6ZSA8 131 aa9.27□□□□□ -0.92
CARMIL3-201ENST00000342740 Q1T7F1 81 aa9.25□□□□□ -0.93
CARMIL3-201ENST00000342740 Q5W150 140 aa9.25□□□□□ -0.93
CARMIL3-201ENST00000342740 Q5VSD8 79 aa9.23□□□□□ -0.93
CARMIL3-201ENST00000342740 ASPMQ8IZT6 3477 aa9.21□□□□□ -0.93
CARMIL3-201ENST00000342740 A0A087X002 238 aa9.21□□□□□ -0.93
CARMIL3-201ENST00000342740 CDC42SE1Q9NRR8 79 aa9.17□□□□□ -0.94
CARMIL3-201ENST00000342740 SPINK7P58062 85 aa9.17□□□□□ -0.94
CARMIL3-201ENST00000342740 CELSR1Q9NYQ6 3014 aa9.16□□□□□ -0.94
CARMIL3-201ENST00000342740 A0A0D9SG42 100 aa9.16□□□□□ -0.94
CARMIL3-201ENST00000342740 KRTAP29-1A8MX34 341 aaPredicted RBP9.16□□□□□ -0.94
CARMIL3-201ENST00000342740 LINC01554Q52M75 96 aa9.15□□□□□ -0.95
CARMIL3-201ENST00000342740 TENM3Q9P273 2699 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms