RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 Q8NAQ8 132 aa11.74□□□□□ -0.53
SMPD1-201ENST00000342245 A8MWP4 228 aa11.73□□□□□ -0.53
SMPD1-201ENST00000342245 MTORP42345 2549 aa11.73□□□□□ -0.53
SMPD1-201ENST00000342245 H3BNG1 76 aa11.7□□□□□ -0.54
SMPD1-201ENST00000342245 SPAG11AQ6PDA7 123 aa11.7□□□□□ -0.54
SMPD1-201ENST00000342245 RPL37AP61513 92 aaKnown RBP11.7□□□□□ -0.54
SMPD1-201ENST00000342245 SMR3AQ99954 134 aa11.69□□□□□ -0.54
SMPD1-201ENST00000342245 KRTAP10-3P60369 221 aa11.68□□□□□ -0.54
SMPD1-201ENST00000342245 SPINK7P58062 85 aa11.67□□□□□ -0.54
SMPD1-201ENST00000342245 ASB16-AS1Q495Z4 193 aa11.67□□□□□ -0.54
SMPD1-201ENST00000342245 TP53AIP1Q9HCN2 124 aa11.67□□□□□ -0.54
SMPD1-201ENST00000342245 LINC00313P59037 77 aa11.66□□□□□ -0.54
SMPD1-201ENST00000342245 REG3GQ6UW15 175 aa11.66□□□□□ -0.54
SMPD1-201ENST00000342245 ITPR2Q14571 2701 aa11.63□□□□□ -0.55
SMPD1-201ENST00000342245 A0A087X002 238 aa11.62□□□□□ -0.55
SMPD1-201ENST00000342245 FN1P02751 2386 aaKnown RBP11.62□□□□□ -0.55
SMPD1-201ENST00000342245 LINC00472Q9H8W2 130 aa11.62□□□□□ -0.55
SMPD1-201ENST00000342245 FAM168BA1KXE4 195 aa11.61□□□□□ -0.55
SMPD1-201ENST00000342245 LINC01556Q5JQF7 62 aa11.6□□□□□ -0.55
SMPD1-201ENST00000342245 LINC01554Q52M75 96 aa11.6□□□□□ -0.55
SMPD1-201ENST00000342245 A0A0G2JQZ4 141 aa11.59□□□□□ -0.55
SMPD1-201ENST00000342245 A0A1W2PNN7 141 aa11.59□□□□□ -0.55
SMPD1-201ENST00000342245 PLA2G1BP04054 148 aaKnown RBP11.59□□□□□ -0.55
SMPD1-201ENST00000342245 H3BS24 57 aa11.59□□□□□ -0.55
SMPD1-201ENST00000342245 MMP24-AS1A0A0U1RRL7 71 aa11.58□□□□□ -0.56
SMPD1-201ENST00000342245 PCOTHQ58A44 107 aa11.57□□□□□ -0.56
SMPD1-201ENST00000342245 J3QKU1 62 aa11.56□□□□□ -0.56
SMPD1-201ENST00000342245 Q6ZR54 194 aa11.56□□□□□ -0.56
SMPD1-201ENST00000342245 KRTAP7-1Q8IUC3 87 aa11.55□□□□□ -0.56
SMPD1-201ENST00000342245 HRES1P13985 223 aa11.54□□□□□ -0.56
SMPD1-201ENST00000342245 DEFB131BA0A096LNP1 70 aa11.54□□□□□ -0.56
SMPD1-201ENST00000342245 HIVEP2P31629 2446 aa11.53□□□□□ -0.56
SMPD1-201ENST00000342245 H0Y9J4 135 aa11.52□□□□□ -0.56
SMPD1-201ENST00000342245 FASNP49327 2511 aaKnown RBP11.52□□□□□ -0.57
SMPD1-201ENST00000342245 UNC79Q9P2D8 2635 aa11.52□□□□□ -0.57
SMPD1-201ENST00000342245 NBEAL2Q6ZNJ1 2754 aa11.52□□□□□ -0.57
SMPD1-201ENST00000342245 PRAC1Q96KF2 57 aa11.51□□□□□ -0.57
SMPD1-201ENST00000342245 GCN1Q92616 2671 aaKnown RBP11.5□□□□□ -0.57
SMPD1-201ENST00000342245 HELZ2Q9BYK8 2649 aaKnown RBP11.49□□□□□ -0.57
SMPD1-201ENST00000342245 IGKV2-24A0A0C4DH68 120 aa11.49□□□□□ -0.57
SMPD1-201ENST00000342245 SPRR1BP22528 89 aa11.48□□□□□ -0.57
SMPD1-201ENST00000342245 VWFP04275 2813 aa11.47□□□□□ -0.57
SMPD1-201ENST00000342245 INAFM1C9JVW0 142 aa11.44□□□□□ -0.58
SMPD1-201ENST00000342245 DNAH10OSP0CZ25 163 aa11.43□□□□□ -0.58
SMPD1-201ENST00000342245 PRLHP81277 87 aa11.42□□□□□ -0.58
SMPD1-201ENST00000342245 RTL8CO15255 209 aa11.39□□□□□ -0.59
SMPD1-201ENST00000342245 ADM2Q7Z4H4 148 aa11.38□□□□□ -0.59
SMPD1-201ENST00000342245 HECTD1Q9ULT8 2610 aa11.38□□□□□ -0.59
SMPD1-201ENST00000342245 C8orf17Q9NRJ1 99 aa11.37□□□□□ -0.59
SMPD1-201ENST00000342245 KMT2BQ9UMN6 2715 aaPredicted RBP11.36□□□□□ -0.59
SMPD1-201ENST00000342245 NOTCH2Q04721 2471 aa11.36□□□□□ -0.59
SMPD1-201ENST00000342245 MDFIQ99750 246 aa11.35□□□□□ -0.59
SMPD1-201ENST00000342245 OTOGQ6ZRI0 2925 aa11.35□□□□□ -0.59
SMPD1-201ENST00000342245 TENM1Q9UKZ4 2725 aa11.35□□□□□ -0.59
SMPD1-201ENST00000342245 ACYP2P14621 99 aa11.33□□□□□ -0.6
SMPD1-201ENST00000342245 SPATA8Q6RVD6 105 aa11.33□□□□□ -0.6
SMPD1-201ENST00000342245 TRRAPQ9Y4A5 3859 aa11.32□□□□□ -0.6
SMPD1-201ENST00000342245 PRR26Q8N8Z3 221 aa11.3□□□□□ -0.6
SMPD1-201ENST00000342245 MRPL34Q9BQ48 92 aaKnown RBP11.29□□□□□ -0.6
SMPD1-201ENST00000342245 Q96NJ1 140 aa11.28□□□□□ -0.6
SMPD1-201ENST00000342245 A0A1B0GVX0 72 aa11.26□□□□□ -0.61
SMPD1-201ENST00000342245 RETNLBQ9BQ08 111 aa11.26□□□□□ -0.61
SMPD1-201ENST00000342245 NSD1Q96L73 2696 aaPredicted RBP11.26□□□□□ -0.61
SMPD1-201ENST00000342245 CASC10Q5T4H9 136 aa11.25□□□□□ -0.61
SMPD1-201ENST00000342245 A0A1B0GU69 56 aa11.25□□□□□ -0.61
SMPD1-201ENST00000342245 ATRQ13535 2644 aa11.23□□□□□ -0.61
SMPD1-201ENST00000342245 CDK2AP2O75956 126 aa11.23□□□□□ -0.61
SMPD1-201ENST00000342245 A0A096LNI7 61 aa11.2□□□□□ -0.62
SMPD1-201ENST00000342245 IGHV6-1A0A0B4J1U7 121 aa11.19□□□□□ -0.62
SMPD1-201ENST00000342245 HIVEP1P15822 2718 aa11.19□□□□□ -0.62
SMPD1-201ENST00000342245 UQCR11O14957 56 aa11.19□□□□□ -0.62
SMPD1-201ENST00000342245 MIR22HGQ0VDD5 57 aa11.19□□□□□ -0.62
SMPD1-201ENST00000342245 TEP1Q99973 2627 aaKnown RBP11.18□□□□□ -0.62
SMPD1-201ENST00000342245 OXLD1Q5BKU9 147 aa11.17□□□□□ -0.62
SMPD1-201ENST00000342245 DMAC1Q96GE9 116 aa11.16□□□□□ -0.62
SMPD1-201ENST00000342245 KRTAP10-11P60412 298 aa11.14□□□□□ -0.63
SMPD1-201ENST00000342245 CSAG1Q6PB30 78 aa11.14□□□□□ -0.63
SMPD1-201ENST00000342245 ALMS1Q8TCU4 4167 aa11.13□□□□□ -0.63
SMPD1-201ENST00000342245 TENM2Q9NT68 2774 aa11.1□□□□□ -0.63
SMPD1-201ENST00000342245 KRTAP13-3Q3SY46 172 aa11.1□□□□□ -0.63
SMPD1-201ENST00000342245 KRTAP11-1Q8IUC1 163 aa11.05□□□□□ -0.64
SMPD1-201ENST00000342245 KRTAP13-1Q8IUC0 172 aa11.03□□□□□ -0.64
SMPD1-201ENST00000342245 PKD1L1Q8TDX9 2849 aa11.03□□□□□ -0.64
SMPD1-201ENST00000342245 ANK2Q01484 3957 aa11.03□□□□□ -0.64
SMPD1-201ENST00000342245 IGLV9-49A0A0B4J1Y8 123 aa11.02□□□□□ -0.65
SMPD1-201ENST00000342245 Q5W150 140 aa11.02□□□□□ -0.65
SMPD1-201ENST00000342245 F8P00451 2351 aa11.01□□□□□ -0.65
SMPD1-201ENST00000342245 K7EIL1 84 aa11□□□□□ -0.65
SMPD1-201ENST00000342245 LINC00483Q53H64 154 aa11□□□□□ -0.65
SMPD1-201ENST00000342245 C14orf177Q52M58 125 aa10.99□□□□□ -0.65
SMPD1-201ENST00000342245 DNAH1Q9P2D7 4330 aa10.99□□□□□ -0.65
SMPD1-201ENST00000342245 CMYA5Q8N3K9 4069 aa10.98□□□□□ -0.65
SMPD1-201ENST00000342245 TENM3Q9P273 2699 aa10.97□□□□□ -0.65
SMPD1-201ENST00000342245 KRTAP24-1Q3LI83 254 aa10.97□□□□□ -0.65
SMPD1-201ENST00000342245 ZNF861PO60384 105 aa10.97□□□□□ -0.65
SMPD1-201ENST00000342245 ZNF706Q9Y5V0 76 aaPredicted RBP10.97□□□□□ -0.65
SMPD1-201ENST00000342245 NOTCH2NLQ7Z3S9 236 aa10.96□□□□□ -0.65
SMPD1-201ENST00000342245 CHTF8P0CG12 524 aa10.95□□□□□ -0.66
SMPD1-201ENST00000342245 C1orf134Q5TEV5 83 aa10.93□□□□□ -0.66
SMPD1-201ENST00000342245 FBN1P35555 2871 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms