RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 USP24Q9UPU5 2620 aa10.95□□□□□ -0.66
SYDE2-202ENST00000341460 CFAP54Q96N23 3096 aa10.95□□□□□ -0.66
SYDE2-202ENST00000341460 BRCA2P51587 3418 aa10.94□□□□□ -0.66
SYDE2-202ENST00000341460 RPL37P61927 97 aaKnown RBP10.9□□□□□ -0.66
SYDE2-202ENST00000341460 LAMA2P24043 3122 aaKnown RBP10.89□□□□□ -0.67
SYDE2-202ENST00000341460 Q5W150 140 aa10.89□□□□□ -0.67
SYDE2-202ENST00000341460 LINC00472Q9H8W2 130 aa10.86□□□□□ -0.67
SYDE2-202ENST00000341460 MGAM2Q2M2H8 2515 aa10.85□□□□□ -0.67
SYDE2-202ENST00000341460 TNP2Q05952 138 aa10.83□□□□□ -0.68
SYDE2-202ENST00000341460 SPATA8Q6RVD6 105 aa10.82□□□□□ -0.68
SYDE2-202ENST00000341460 Q8NDZ9 215 aa10.82□□□□□ -0.68
SYDE2-202ENST00000341460 ZCCHC13Q8WW36 166 aaKnown RBP10.81□□□□□ -0.68
SYDE2-202ENST00000341460 FLNAP21333 2647 aaKnown RBP10.81□□□□□ -0.68
SYDE2-202ENST00000341460 KRTAP25-1Q3LHN0 102 aa10.8□□□□□ -0.68
SYDE2-202ENST00000341460 Q6ZSA8 131 aa10.8□□□□□ -0.68
SYDE2-202ENST00000341460 SPRR1AP35321 89 aa10.78□□□□□ -0.68
SYDE2-202ENST00000341460 H1FX-AS1Q4G0G2 97 aa10.78□□□□□ -0.68
SYDE2-202ENST00000341460 CENPEQ02224 2701 aa10.77□□□□□ -0.69
SYDE2-202ENST00000341460 TRANK1O15050 2925 aa10.77□□□□□ -0.69
SYDE2-202ENST00000341460 UNC80Q8N2C7 3258 aa10.75□□□□□ -0.69
SYDE2-202ENST00000341460 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.75□□□□□ -0.69
SYDE2-202ENST00000341460 MGAQ8IWI9 3026 aa10.74□□□□□ -0.69
SYDE2-202ENST00000341460 ITPR3Q14573 2671 aa10.74□□□□□ -0.69
SYDE2-202ENST00000341460 NDUFAF8A1L188 74 aa10.72□□□□□ -0.69
SYDE2-202ENST00000341460 PRUNE2Q8WUY3 3088 aa10.71□□□□□ -0.7
SYDE2-202ENST00000341460 S4R3F8 94 aa10.7□□□□□ -0.7
SYDE2-202ENST00000341460 SPRR1BP22528 89 aa10.7□□□□□ -0.7
SYDE2-202ENST00000341460 ADM2Q7Z4H4 148 aa10.69□□□□□ -0.7
SYDE2-202ENST00000341460 Q6ZR54 194 aa10.69□□□□□ -0.7
SYDE2-202ENST00000341460 ATRQ13535 2644 aa10.68□□□□□ -0.7
SYDE2-202ENST00000341460 WDFY4Q6ZS81 3184 aa10.67□□□□□ -0.7
SYDE2-202ENST00000341460 XIRP2A4UGR9 3374 aa10.65□□□□□ -0.7
SYDE2-202ENST00000341460 PLAC8Q9NZF1 115 aa10.64□□□□□ -0.71
SYDE2-202ENST00000341460 KRTAP26-1Q6PEX3 210 aa10.64□□□□□ -0.71
SYDE2-202ENST00000341460 KRTAP29-1A8MX34 341 aaPredicted RBP10.63□□□□□ -0.71
SYDE2-202ENST00000341460 HELZ2Q9BYK8 2649 aaKnown RBP10.62□□□□□ -0.71
SYDE2-202ENST00000341460 TRIOO75962 3097 aa10.6□□□□□ -0.71
SYDE2-202ENST00000341460 R4GN34 69 aa10.6□□□□□ -0.71
SYDE2-202ENST00000341460 CFAP46Q8IYW2 2715 aa10.6□□□□□ -0.71
SYDE2-202ENST00000341460 A8MU10 97 aa10.58□□□□□ -0.72
SYDE2-202ENST00000341460 M0R2T5 61 aa10.57□□□□□ -0.72
SYDE2-202ENST00000341460 MAST4O15021 2626 aa10.55□□□□□ -0.72
SYDE2-202ENST00000341460 CDH23Q9H251 3354 aa10.54□□□□□ -0.72
SYDE2-202ENST00000341460 A0A087X002 238 aa10.53□□□□□ -0.72
SYDE2-202ENST00000341460 AKAP13Q12802 2813 aa10.52□□□□□ -0.72
SYDE2-202ENST00000341460 LCE6AA0A183 80 aa10.51□□□□□ -0.73
SYDE2-202ENST00000341460 VPS13AQ96RL7 3174 aa10.5□□□□□ -0.73
SYDE2-202ENST00000341460 CHD6Q8TD26 2715 aa10.5□□□□□ -0.73
SYDE2-202ENST00000341460 ZNF292O60281 2723 aa10.49□□□□□ -0.73
SYDE2-202ENST00000341460 FLG2Q5D862 2391 aaPredicted RBP10.46□□□□□ -0.74
SYDE2-202ENST00000341460 PANO1I0J062 215 aa10.44□□□□□ -0.74
SYDE2-202ENST00000341460 MAP1AP78559 2803 aaPredicted RBP10.42□□□□□ -0.74
SYDE2-202ENST00000341460 PLAC4Q8WY50 150 aa10.41□□□□□ -0.74
SYDE2-202ENST00000341460 M0QZ58 72 aa10.41□□□□□ -0.74
SYDE2-202ENST00000341460 CELSR3Q9NYQ7 3312 aa10.4□□□□□ -0.74
SYDE2-202ENST00000341460 SEC61BP60468 96 aaKnown RBP10.4□□□□□ -0.74
SYDE2-202ENST00000341460 FRYQ5TBA9 3013 aa10.38□□□□□ -0.75
SYDE2-202ENST00000341460 KRTAP1-5Q9BYS1 174 aa10.38□□□□□ -0.75
SYDE2-202ENST00000341460 DSPP15924 2871 aaKnown RBP10.36□□□□□ -0.75
SYDE2-202ENST00000341460 A8MUU9 505 aa10.33□□□□□ -0.76
SYDE2-202ENST00000341460 FREM2Q5SZK8 3169 aa10.33□□□□□ -0.76
SYDE2-202ENST00000341460 GCN1Q92616 2671 aaKnown RBP10.31□□□□□ -0.76
SYDE2-202ENST00000341460 DNAH14Q0VDD8 3507 aa10.31□□□□□ -0.76
SYDE2-202ENST00000341460 KRTAP4-16G5E9R7 235 aaPredicted RBP10.31□□□□□ -0.76
SYDE2-202ENST00000341460 TEX15Q9BXT5 2789 aa10.31□□□□□ -0.76
SYDE2-202ENST00000341460 VCANP13611 3396 aa10.29□□□□□ -0.76
SYDE2-202ENST00000341460 Q5VSD8 79 aa10.29□□□□□ -0.76
SYDE2-202ENST00000341460 SZT2Q5T011 3432 aa10.27□□□□□ -0.77
SYDE2-202ENST00000341460 KRTAP10-1P60331 282 aa10.26□□□□□ -0.77
SYDE2-202ENST00000341460 C20orf166-AS1Q96NR2 134 aa10.26□□□□□ -0.77
SYDE2-202ENST00000341460 LAMA1P25391 3075 aa10.26□□□□□ -0.77
SYDE2-202ENST00000341460 STAB1Q9NY15 2570 aa10.26□□□□□ -0.77
SYDE2-202ENST00000341460 TEP1Q99973 2627 aaKnown RBP10.25□□□□□ -0.77
SYDE2-202ENST00000341460 KRTAP11-1Q8IUC1 163 aa10.23□□□□□ -0.77
SYDE2-202ENST00000341460 KRTAP10-2P60368 255 aa10.22□□□□□ -0.77
SYDE2-202ENST00000341460 DMBT1Q9UGM3 2413 aaPredicted RBP10.22□□□□□ -0.77
SYDE2-202ENST00000341460 UNC79Q9P2D8 2635 aa10.21□□□□□ -0.77
SYDE2-202ENST00000341460 NBEAL2Q6ZNJ1 2754 aa10.2□□□□□ -0.78
SYDE2-202ENST00000341460 NOTCH2NLQ7Z3S9 236 aa10.18□□□□□ -0.78
SYDE2-202ENST00000341460 NBEAQ8NFP9 2946 aa10.15□□□□□ -0.78
SYDE2-202ENST00000341460 KALRNO60229 2985 aa10.13□□□□□ -0.79
SYDE2-202ENST00000341460 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
SYDE2-202ENST00000341460 NBEAL1Q6ZS30 2694 aa10.11□□□□□ -0.79
SYDE2-202ENST00000341460 COL6A5A8TX70 2615 aa10.1□□□□□ -0.79
SYDE2-202ENST00000341460 IGSF10Q6WRI0 2623 aa10.1□□□□□ -0.79
SYDE2-202ENST00000341460 SETXQ7Z333 2677 aaKnown RBP10.07□□□□□ -0.8
SYDE2-202ENST00000341460 UBR5O95071 2799 aaPredicted RBP10.05□□□□□ -0.8
SYDE2-202ENST00000341460 BOD1L1Q8NFC6 3051 aa10.03□□□□□ -0.8
SYDE2-202ENST00000341460 ATMQ13315 3056 aa10.02□□□□□ -0.8
SYDE2-202ENST00000341460 ADGRG4Q8IZF6 3080 aa10□□□□□ -0.81
SYDE2-202ENST00000341460 C10orf95Q9H7T3 257 aa9.99□□□□□ -0.81
SYDE2-202ENST00000341460 COL6A3P12111 3177 aa9.98□□□□□ -0.81
SYDE2-202ENST00000341460 FRYLO94915 3013 aa9.98□□□□□ -0.81
SYDE2-202ENST00000341460 TACC2O95359 2948 aa9.94□□□□□ -0.82
SYDE2-202ENST00000341460 LRBAP50851 2863 aa9.93□□□□□ -0.82
SYDE2-202ENST00000341460 DMXL2Q8TDJ6 3036 aa9.92□□□□□ -0.82
SYDE2-202ENST00000341460 COL12A1Q99715 3063 aa9.91□□□□□ -0.82
SYDE2-202ENST00000341460 ITPR1Q14643 2758 aa9.9□□□□□ -0.82
SYDE2-202ENST00000341460 FLNCQ14315 2725 aa9.88□□□□□ -0.83
SYDE2-202ENST00000341460 RPS29P62273 56 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms