RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 KRTAP4-6Q9BYQ5 205 aa8.63□□□□□ -1.03
VAPA-201ENST00000340541 hADV29S1A0JD25 119 aa8.62□□□□□ -1.03
VAPA-201ENST00000340541 KRTAP13-3Q3SY46 172 aa8.62□□□□□ -1.03
VAPA-201ENST00000340541 PRO1933Q9H354 126 aa8.62□□□□□ -1.03
VAPA-201ENST00000340541 H7C2G1 150 aa8.61□□□□□ -1.03
VAPA-201ENST00000340541 BVES-AS1Q5T3Y7 98 aa8.61□□□□□ -1.03
VAPA-201ENST00000340541 HRCT1Q6UXD1 115 aa8.61□□□□□ -1.03
VAPA-201ENST00000340541 Q6ZQY7 126 aa8.61□□□□□ -1.03
VAPA-201ENST00000340541 RAB37Q96AX2 223 aa8.61□□□□□ -1.03
VAPA-201ENST00000340541 A0A0G2JQZ4 141 aa8.6□□□□□ -1.03
VAPA-201ENST00000340541 FXYD2P54710 66 aa8.6□□□□□ -1.03
VAPA-201ENST00000340541 CD164Q04900 197 aa8.6□□□□□ -1.03
VAPA-201ENST00000340541 MUC17Q685J3 4493 aa8.6□□□□□ -1.03
VAPA-201ENST00000340541 LOC105371267A0A1B0GV96 52 aa8.59□□□□□ -1.03
VAPA-201ENST00000340541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.57□□□□□ -1.04
VAPA-201ENST00000340541 LIMD2Q9BT23 127 aa8.57□□□□□ -1.04
VAPA-201ENST00000340541 PRO1854Q9UHT4 67 aa8.56□□□□□ -1.04
VAPA-201ENST00000340541 TMEM238LA0A1B0GVL6 79 aa8.55□□□□□ -1.04
VAPA-201ENST00000340541 A6NJY4 79 aa8.55□□□□□ -1.04
VAPA-201ENST00000340541 HSD52Q0P140 79 aa8.55□□□□□ -1.04
VAPA-201ENST00000340541 FAM218AQ96MZ4 157 aa8.55□□□□□ -1.04
VAPA-201ENST00000340541 FAT4Q6V0I7 4981 aa8.55□□□□□ -1.04
VAPA-201ENST00000340541 Q5XG85 94 aa8.54□□□□□ -1.04
VAPA-201ENST00000340541 IGLV8-61A0A075B6I0 122 aa8.53□□□□□ -1.04
VAPA-201ENST00000340541 H0YGX0 51 aa8.53□□□□□ -1.04
VAPA-201ENST00000340541 UQCR10Q9UDW1 63 aa8.53□□□□□ -1.04
VAPA-201ENST00000340541 PPDPFLQ8WWR9 84 aa8.52□□□□□ -1.05
VAPA-201ENST00000340541 F8WEM9 126 aa8.51□□□□□ -1.05
VAPA-201ENST00000340541 K7ERJ3 54 aa8.5□□□□□ -1.05
VAPA-201ENST00000340541 OCIAD2Q56VL3 154 aa8.5□□□□□ -1.05
VAPA-201ENST00000340541 TRIAP1O43715 76 aa8.49□□□□□ -1.05
VAPA-201ENST00000340541 ASB16-AS1Q495Z4 193 aa8.49□□□□□ -1.05
VAPA-201ENST00000340541 Q6JHZ5 121 aa8.49□□□□□ -1.05
VAPA-201ENST00000340541 IGFL1Q6UW32 110 aa8.49□□□□□ -1.05
VAPA-201ENST00000340541 C1orf195Q5TG92 126 aa8.47□□□□□ -1.05
VAPA-201ENST00000340541 CLEC2BQ92478 149 aa8.47□□□□□ -1.05
VAPA-201ENST00000340541 SNHG12Q9BXW3 62 aa8.47□□□□□ -1.05
VAPA-201ENST00000340541 A0A1B0GX51 115 aa8.46□□□□□ -1.06
VAPA-201ENST00000340541 XP32Q5T750 250 aa8.46□□□□□ -1.06
VAPA-201ENST00000340541 KRTAP9-6A0A140TA67 174 aa8.45□□□□□ -1.06
VAPA-201ENST00000340541 SMIM6P0DI80 62 aa8.45□□□□□ -1.06
VAPA-201ENST00000340541 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
VAPA-201ENST00000340541 H3BUT2 72 aa8.44□□□□□ -1.06
VAPA-201ENST00000340541 SNCGO76070 127 aa8.44□□□□□ -1.06
VAPA-201ENST00000340541 TRBV7-7A0A0K0K1E9 115 aa8.43□□□□□ -1.06
VAPA-201ENST00000340541 NDUFV3P56181 108 aaKnown RBP8.42□□□□□ -1.06
VAPA-201ENST00000340541 TCL1BO95988 128 aa8.41□□□□□ -1.06
VAPA-201ENST00000340541 PSMB2P49721 201 aa8.4□□□□□ -1.06
VAPA-201ENST00000340541 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
VAPA-201ENST00000340541 KRTAP4-1Q9BYQ7 146 aa8.39□□□□□ -1.07
VAPA-201ENST00000340541 FABP2P12104 132 aa8.37□□□□□ -1.07
VAPA-201ENST00000340541 Q6Q795 121 aa8.37□□□□□ -1.07
VAPA-201ENST00000340541 GHRHP01286 108 aa8.36□□□□□ -1.07
VAPA-201ENST00000340541 COX6CP09669 75 aa8.36□□□□□ -1.07
VAPA-201ENST00000340541 H3BMG7 143 aa8.35□□□□□ -1.07
VAPA-201ENST00000340541 ORMDL1Q9P0S3 153 aa8.34□□□□□ -1.07
VAPA-201ENST00000340541 DNAL4O96015 105 aa8.33□□□□□ -1.08
VAPA-201ENST00000340541 TEN1Q86WV5 123 aa8.32□□□□□ -1.08
VAPA-201ENST00000340541 A0A1W2PNM2 257 aa8.3□□□□□ -1.08
VAPA-201ENST00000340541 H3BQ85 93 aa8.3□□□□□ -1.08
VAPA-201ENST00000340541 M0R143 59 aa8.3□□□□□ -1.08
VAPA-201ENST00000340541 LST1O00453 97 aa8.3□□□□□ -1.08
VAPA-201ENST00000340541 TRACP01848 142 aa8.3□□□□□ -1.08
VAPA-201ENST00000340541 TMEM256-PLSCR3K7ERE1 68 aa8.29□□□□□ -1.08
VAPA-201ENST00000340541 SCGB1C2P0DMR2 95 aa8.28□□□□□ -1.08
VAPA-201ENST00000340541 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
VAPA-201ENST00000340541 A0A087WSZ3 146 aa8.27□□□□□ -1.09
VAPA-201ENST00000340541 SS18L2Q9UHA2 77 aa8.27□□□□□ -1.09
VAPA-201ENST00000340541 TSTD3H0UI37 97 aa8.26□□□□□ -1.09
VAPA-201ENST00000340541 UBE2V1Q13404 147 aa8.26□□□□□ -1.09
VAPA-201ENST00000340541 A0A1B0GV72 72 aa8.25□□□□□ -1.09
VAPA-201ENST00000340541 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
VAPA-201ENST00000340541 ANKRD29Q8N6D5 301 aa8.25□□□□□ -1.09
VAPA-201ENST00000340541 Q96NJ1 140 aa8.25□□□□□ -1.09
VAPA-201ENST00000340541 NAA38Q9BRA0 125 aaKnown RBP8.24□□□□□ -1.09
VAPA-201ENST00000340541 TRBV7-4A0A0J9YYF1 115 aa8.22□□□□□ -1.09
VAPA-201ENST00000340541 OBSCN-AS1Q96MR7 158 aa8.2□□□□□ -1.1
VAPA-201ENST00000340541 BAALC-AS2P0C853 105 aa8.19□□□□□ -1.1
VAPA-201ENST00000340541 CCKP06307 115 aa8.18□□□□□ -1.1
VAPA-201ENST00000340541 KRTAP19-2Q3LHN2 52 aa8.18□□□□□ -1.1
VAPA-201ENST00000340541 ATXN8Q156A1 80 aa8.17□□□□□ -1.1
VAPA-201ENST00000340541 CRCT1Q9UGL9 99 aa8.17□□□□□ -1.1
VAPA-201ENST00000340541 RBM3P98179 157 aaKnown RBP8.16□□□□□ -1.1
VAPA-201ENST00000340541 BATFQ16520 125 aa8.15□□□□□ -1.1
VAPA-201ENST00000340541 Q75L30 129 aa8.14□□□□□ -1.11
VAPA-201ENST00000340541 MT1HP80294 61 aa8.13□□□□□ -1.11
VAPA-201ENST00000340541 LINC00472Q9H8W2 130 aa8.13□□□□□ -1.11
VAPA-201ENST00000340541 PCP4L1A6NKN8 68 aa8.12□□□□□ -1.11
VAPA-201ENST00000340541 DSCR8Q96T75 97 aa8.12□□□□□ -1.11
VAPA-201ENST00000340541 SIGMAR1Q99720 223 aa8.11□□□□□ -1.11
VAPA-201ENST00000340541 IGKV4-1P06312 121 aa8.1□□□□□ -1.11
VAPA-201ENST00000340541 C20orf166-AS1Q96NR2 134 aa8.1□□□□□ -1.11
VAPA-201ENST00000340541 VPS25Q9BRG1 176 aa8.1□□□□□ -1.11
VAPA-201ENST00000340541 TRBV20-1A0A075B6N2 111 aa8.09□□□□□ -1.11
VAPA-201ENST00000340541 A8MUU9 505 aa8.09□□□□□ -1.11
VAPA-201ENST00000340541 C9JAW5 83 aa8.09□□□□□ -1.11
VAPA-201ENST00000340541 TAX1BP3O14907 124 aa8.09□□□□□ -1.11
VAPA-201ENST00000340541 DSCR10P59022 87 aa8.09□□□□□ -1.11
VAPA-201ENST00000340541 DEFB116Q30KQ4 102 aa8.09□□□□□ -1.11
VAPA-201ENST00000340541 LYRM7Q5U5X0 104 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms