RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 A0A1B0GV72 72 aa7.85□□□□□ -1.15
SIRPB3P-201ENST00000340424 FAM240AA0A1B0GVK7 77 aa7.85□□□□□ -1.15
SIRPB3P-201ENST00000340424 NCR3O14931 201 aa7.85□□□□□ -1.15
SIRPB3P-201ENST00000340424 SPRR1AP35321 89 aa7.85□□□□□ -1.15
SIRPB3P-201ENST00000340424 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
SIRPB3P-201ENST00000340424 KRTAP4-12Q9BQ66 201 aa7.85□□□□□ -1.15
SIRPB3P-201ENST00000340424 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
SIRPB3P-201ENST00000340424 NDUFC2O95298 119 aa7.84□□□□□ -1.15
SIRPB3P-201ENST00000340424 HIGD2AQ9BW72 106 aa7.84□□□□□ -1.15
SIRPB3P-201ENST00000340424 ETDCA0A1B0GVM5 59 aa7.83□□□□□ -1.16
SIRPB3P-201ENST00000340424 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
SIRPB3P-201ENST00000340424 DAND5Q8N907 189 aa7.83□□□□□ -1.16
SIRPB3P-201ENST00000340424 ANAPC11Q9NYG5 84 aa7.83□□□□□ -1.16
SIRPB3P-201ENST00000340424 TRBV10-3A0A0K0K1G6 114 aa7.82□□□□□ -1.16
SIRPB3P-201ENST00000340424 H7C2G1 150 aa7.82□□□□□ -1.16
SIRPB3P-201ENST00000340424 Q6Q795 121 aa7.82□□□□□ -1.16
SIRPB3P-201ENST00000340424 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
SIRPB3P-201ENST00000340424 KRTAP4-16G5E9R7 235 aaPredicted RBP7.81□□□□□ -1.16
SIRPB3P-201ENST00000340424 TRACP01848 142 aa7.81□□□□□ -1.16
SIRPB3P-201ENST00000340424 MT-ATP8P03928 68 aa7.81□□□□□ -1.16
SIRPB3P-201ENST00000340424 SOSTDC1Q6X4U4 206 aa7.81□□□□□ -1.16
SIRPB3P-201ENST00000340424 PRR4Q16378 134 aa7.8□□□□□ -1.16
SIRPB3P-201ENST00000340424 LINC00304Q8N9R0 145 aa7.8□□□□□ -1.16
SIRPB3P-201ENST00000340424 SPRR4Q96PI1 79 aa7.8□□□□□ -1.16
SIRPB3P-201ENST00000340424 KRTAP9-2Q9BYQ4 174 aa7.8□□□□□ -1.16
SIRPB3P-201ENST00000340424 S100A7L2Q5SY68 101 aa7.79□□□□□ -1.16
SIRPB3P-201ENST00000340424 IGLV6-57P01721 117 aa7.78□□□□□ -1.16
SIRPB3P-201ENST00000340424 TRAV13-2A0A0B4J235 113 aa7.77□□□□□ -1.17
SIRPB3P-201ENST00000340424 B5MCH6 92 aa7.77□□□□□ -1.17
SIRPB3P-201ENST00000340424 SPAG11AQ6PDA7 123 aa7.77□□□□□ -1.17
SIRPB3P-201ENST00000340424 CLEC2BQ92478 149 aa7.77□□□□□ -1.17
SIRPB3P-201ENST00000340424 TEX49A0A1B0GTD5 131 aa7.76□□□□□ -1.17
SIRPB3P-201ENST00000340424 ACYP1P07311 99 aa7.76□□□□□ -1.17
SIRPB3P-201ENST00000340424 SMCR5Q8TEV8 140 aa7.76□□□□□ -1.17
SIRPB3P-201ENST00000340424 TRAV23DV6A0A075B6W5 121 aa7.75□□□□□ -1.17
SIRPB3P-201ENST00000340424 NPC2P61916 151 aa7.75□□□□□ -1.17
SIRPB3P-201ENST00000340424 Q6ZRX8 168 aa7.75□□□□□ -1.17
SIRPB3P-201ENST00000340424 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
SIRPB3P-201ENST00000340424 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
SIRPB3P-201ENST00000340424 KRTAP9-6A0A140TA67 174 aa7.73□□□□□ -1.17
SIRPB3P-201ENST00000340424 SNCGO76070 127 aa7.73□□□□□ -1.17
SIRPB3P-201ENST00000340424 C3orf22Q8N5N4 141 aa7.73□□□□□ -1.17
SIRPB3P-201ENST00000340424 ZNF73O43830 326 aaPredicted RBP7.72□□□□□ -1.17
SIRPB3P-201ENST00000340424 TRBV7-7A0A0K0K1E9 115 aa7.71□□□□□ -1.18
SIRPB3P-201ENST00000340424 Q9BRP9 147 aa7.71□□□□□ -1.18
SIRPB3P-201ENST00000340424 H0YGX0 51 aa7.7□□□□□ -1.18
SIRPB3P-201ENST00000340424 IMUPQ9GZP8 106 aa7.7□□□□□ -1.18
SIRPB3P-201ENST00000340424 GAGE2AQ6NT46 116 aa7.69□□□□□ -1.18
SIRPB3P-201ENST00000340424 ERC2-IT1O76042 136 aa7.68□□□□□ -1.18
SIRPB3P-201ENST00000340424 OR13C6PQ8NH95 151 aa7.68□□□□□ -1.18
SIRPB3P-201ENST00000340424 SPINK1P00995 79 aa7.67□□□□□ -1.18
SIRPB3P-201ENST00000340424 Q8NBF4 154 aa7.67□□□□□ -1.18
SIRPB3P-201ENST00000340424 A0A1B0GX51 115 aa7.66□□□□□ -1.18
SIRPB3P-201ENST00000340424 BAALC-AS2P0C853 105 aa7.66□□□□□ -1.18
SIRPB3P-201ENST00000340424 NDUFV3P56181 108 aaKnown RBP7.66□□□□□ -1.18
SIRPB3P-201ENST00000340424 SSBP3-AS1Q7Z2R9 100 aa7.66□□□□□ -1.18
SIRPB3P-201ENST00000340424 OBSCN-AS1Q96MR7 158 aa7.66□□□□□ -1.18
SIRPB3P-201ENST00000340424 FAM218AQ96MZ4 157 aa7.66□□□□□ -1.18
SIRPB3P-201ENST00000340424 ANAPC13Q9BS18 74 aa7.66□□□□□ -1.18
SIRPB3P-201ENST00000340424 DHRS4-AS1Q9P1J3 65 aa7.66□□□□□ -1.18
SIRPB3P-201ENST00000340424 TPRXLQ17RH7 258 aa7.65□□□□□ -1.18
SIRPB3P-201ENST00000340424 LCE3BQ5TA77 95 aa7.65□□□□□ -1.18
SIRPB3P-201ENST00000340424 FP248Q71RG6 208 aaPredicted RBP7.65□□□□□ -1.18
SIRPB3P-201ENST00000340424 LINC00643Q86TS7 51 aa7.65□□□□□ -1.18
SIRPB3P-201ENST00000340424 SMIM11BQ8TCY0 68 aa7.65□□□□□ -1.18
SIRPB3P-201ENST00000340424 RETNLBQ9BQ08 111 aa7.65□□□□□ -1.18
SIRPB3P-201ENST00000340424 RPS29P62273 56 aaKnown RBP7.64□□□□□ -1.19
SIRPB3P-201ENST00000340424 IGLV7-46A0A075B6I9 117 aa7.63□□□□□ -1.19
SIRPB3P-201ENST00000340424 IGLV9-49A0A0B4J1Y8 123 aa7.63□□□□□ -1.19
SIRPB3P-201ENST00000340424 MOBPQ13875 183 aa7.63□□□□□ -1.19
SIRPB3P-201ENST00000340424 TRBV7-6A0A0J9YX20 115 aa7.62□□□□□ -1.19
SIRPB3P-201ENST00000340424 ELOF1P60002 83 aaKnown RBP7.62□□□□□ -1.19
SIRPB3P-201ENST00000340424 MUC2Q02817 5179 aa7.61□□□□□ -1.19
SIRPB3P-201ENST00000340424 SPRR1BP22528 89 aa7.6□□□□□ -1.19
SIRPB3P-201ENST00000340424 COX7BP24311 80 aa7.6□□□□□ -1.19
SIRPB3P-201ENST00000340424 C6orf99Q4VX62 202 aa7.6□□□□□ -1.19
SIRPB3P-201ENST00000340424 DNAL4O96015 105 aa7.59□□□□□ -1.19
SIRPB3P-201ENST00000340424 C9orf153Q5TBE3 101 aa7.59□□□□□ -1.19
SIRPB3P-201ENST00000340424 ST20-AS1Q8NBB2 130 aa7.59□□□□□ -1.19
SIRPB3P-201ENST00000340424 MUC17Q685J3 4493 aa7.58□□□□□ -1.2
SIRPB3P-201ENST00000340424 A0A0U1RQV1 116 aa7.56□□□□□ -1.2
SIRPB3P-201ENST00000340424 LAMTOR3Q9UHA4 124 aa7.56□□□□□ -1.2
SIRPB3P-201ENST00000340424 ORMDL1Q9P0S3 153 aa7.55□□□□□ -1.2
SIRPB3P-201ENST00000340424 Q6JHZ5 121 aa7.54□□□□□ -1.2
SIRPB3P-201ENST00000340424 Q8N377 158 aa7.54□□□□□ -1.2
SIRPB3P-201ENST00000340424 JMJD7-PLA2G4BH0Y9G9 81 aa7.53□□□□□ -1.2
SIRPB3P-201ENST00000340424 HIST1H4AP62805 103 aaKnown RBP7.53□□□□□ -1.2
SIRPB3P-201ENST00000340424 H3BQ85 93 aa7.52□□□□□ -1.21
SIRPB3P-201ENST00000340424 KRTAP13-3Q3SY46 172 aa7.51□□□□□ -1.21
SIRPB3P-201ENST00000340424 LIMD2Q9BT23 127 aa7.51□□□□□ -1.21
SIRPB3P-201ENST00000340424 IGLV5-48A0A075B6I7 105 aa7.5□□□□□ -1.21
SIRPB3P-201ENST00000340424 CCDC179H3BU77 68 aa7.5□□□□□ -1.21
SIRPB3P-201ENST00000340424 TMEM256-PLSCR3K7ERE1 68 aa7.5□□□□□ -1.21
SIRPB3P-201ENST00000340424 FAM236AA0A1B0GUQ0 79 aa7.49□□□□□ -1.21
SIRPB3P-201ENST00000340424 FAM236BA0A1B0GV22 79 aa7.49□□□□□ -1.21
SIRPB3P-201ENST00000340424 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
SIRPB3P-201ENST00000340424 CCKP06307 115 aa7.49□□□□□ -1.21
SIRPB3P-201ENST00000340424 CD164Q04900 197 aa7.49□□□□□ -1.21
SIRPB3P-201ENST00000340424 ATP5EP2Q5VTU8 51 aa7.49□□□□□ -1.21
SIRPB3P-201ENST00000340424 LINC00575Q6W349 94 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms