RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 A0A0B4J2C4 111 aa8.06□□□□□ -1.12
ERCC1-203ENST00000340192 Q5XG85 94 aa8.06□□□□□ -1.12
ERCC1-203ENST00000340192 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.06□□□□□ -1.12
ERCC1-203ENST00000340192 PYY3Q5JQD4 70 aa8.05□□□□□ -1.12
ERCC1-203ENST00000340192 XP32Q5T750 250 aa8.05□□□□□ -1.12
ERCC1-203ENST00000340192 CEND1Q8N111 149 aa8.05□□□□□ -1.12
ERCC1-203ENST00000340192 SEC61BP60468 96 aaKnown RBP8.04□□□□□ -1.12
ERCC1-203ENST00000340192 TMA7Q9Y2S6 64 aaKnown RBP8.04□□□□□ -1.12
ERCC1-203ENST00000340192 IGLV8-61A0A075B6I0 122 aa8.02□□□□□ -1.13
ERCC1-203ENST00000340192 TMEM238LA0A1B0GVL6 79 aa8.02□□□□□ -1.13
ERCC1-203ENST00000340192 A6NJY4 79 aa8.02□□□□□ -1.13
ERCC1-203ENST00000340192 C1orf195Q5TG92 126 aa8.02□□□□□ -1.13
ERCC1-203ENST00000340192 Q6JHZ5 121 aa8.02□□□□□ -1.13
ERCC1-203ENST00000340192 PPDPFLQ8WWR9 84 aa8.02□□□□□ -1.13
ERCC1-203ENST00000340192 C9orf92A6NGG3 77 aa8.01□□□□□ -1.13
ERCC1-203ENST00000340192 FXYD2P54710 66 aa8.01□□□□□ -1.13
ERCC1-203ENST00000340192 OCIAD2Q56VL3 154 aa8.01□□□□□ -1.13
ERCC1-203ENST00000340192 PRO1854Q9UHT4 67 aa8.01□□□□□ -1.13
ERCC1-203ENST00000340192 FAT4Q6V0I7 4981 aa8.01□□□□□ -1.13
ERCC1-203ENST00000340192 H0YGX0 51 aa8□□□□□ -1.13
ERCC1-203ENST00000340192 IGFL1Q6UW32 110 aa8□□□□□ -1.13
ERCC1-203ENST00000340192 CLEC2BQ92478 149 aa8□□□□□ -1.13
ERCC1-203ENST00000340192 FAM218AQ96MZ4 157 aa8□□□□□ -1.13
ERCC1-203ENST00000340192 SNHG12Q9BXW3 62 aa8□□□□□ -1.13
ERCC1-203ENST00000340192 SNCGO76070 127 aa7.99□□□□□ -1.13
ERCC1-203ENST00000340192 TCL1BO95988 128 aa7.99□□□□□ -1.13
ERCC1-203ENST00000340192 KRTAP4-1Q9BYQ7 146 aa7.99□□□□□ -1.13
ERCC1-203ENST00000340192 TRBV7-7A0A0K0K1E9 115 aa7.96□□□□□ -1.14
ERCC1-203ENST00000340192 H3BUT2 72 aa7.96□□□□□ -1.14
ERCC1-203ENST00000340192 HSD52Q0P140 79 aa7.96□□□□□ -1.14
ERCC1-203ENST00000340192 TRIAP1O43715 76 aa7.95□□□□□ -1.14
ERCC1-203ENST00000340192 LCE2AQ5TA79 106 aaPredicted RBP7.95□□□□□ -1.14
ERCC1-203ENST00000340192 A0A1B0GX51 115 aa7.93□□□□□ -1.14
ERCC1-203ENST00000340192 K7ERJ3 54 aa7.93□□□□□ -1.14
ERCC1-203ENST00000340192 NDUFV3P56181 108 aaKnown RBP7.92□□□□□ -1.14
ERCC1-203ENST00000340192 UQCR10Q9UDW1 63 aa7.92□□□□□ -1.14
ERCC1-203ENST00000340192 PCOTHQ58A44 107 aa7.9□□□□□ -1.14
ERCC1-203ENST00000340192 GHRHP01286 108 aa7.89□□□□□ -1.15
ERCC1-203ENST00000340192 FABP2P12104 132 aa7.89□□□□□ -1.15
ERCC1-203ENST00000340192 PSMB2P49721 201 aa7.89□□□□□ -1.15
ERCC1-203ENST00000340192 H3BMG7 143 aa7.87□□□□□ -1.15
ERCC1-203ENST00000340192 Q6Q795 121 aa7.87□□□□□ -1.15
ERCC1-203ENST00000340192 TEN1Q86WV5 123 aa7.86□□□□□ -1.15
ERCC1-203ENST00000340192 DNAL4O96015 105 aa7.85□□□□□ -1.15
ERCC1-203ENST00000340192 COX6CP09669 75 aa7.85□□□□□ -1.15
ERCC1-203ENST00000340192 LST1O00453 97 aa7.84□□□□□ -1.15
ERCC1-203ENST00000340192 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
ERCC1-203ENST00000340192 ORMDL1Q9P0S3 153 aa7.83□□□□□ -1.16
ERCC1-203ENST00000340192 SS18L2Q9UHA2 77 aa7.83□□□□□ -1.16
ERCC1-203ENST00000340192 A0A087WSZ3 146 aa7.81□□□□□ -1.16
ERCC1-203ENST00000340192 H3BQ85 93 aa7.8□□□□□ -1.16
ERCC1-203ENST00000340192 OBSCN-AS1Q96MR7 158 aa7.8□□□□□ -1.16
ERCC1-203ENST00000340192 KRTAP9-2Q9BYQ4 174 aa7.8□□□□□ -1.16
ERCC1-203ENST00000340192 A0A1B0GV72 72 aa7.79□□□□□ -1.16
ERCC1-203ENST00000340192 A0A1W2PNM2 257 aa7.79□□□□□ -1.16
ERCC1-203ENST00000340192 TMEM256-PLSCR3K7ERE1 68 aa7.79□□□□□ -1.16
ERCC1-203ENST00000340192 SCGB1C2P0DMR2 95 aa7.77□□□□□ -1.17
ERCC1-203ENST00000340192 LCE2CQ5TA81 110 aa7.77□□□□□ -1.17
ERCC1-203ENST00000340192 ANKRD29Q8N6D5 301 aa7.77□□□□□ -1.17
ERCC1-203ENST00000340192 TRACP01848 142 aa7.76□□□□□ -1.17
ERCC1-203ENST00000340192 KRTAP19-2Q3LHN2 52 aa7.76□□□□□ -1.17
ERCC1-203ENST00000340192 Q96NJ1 140 aa7.76□□□□□ -1.17
ERCC1-203ENST00000340192 TRBV7-4A0A0J9YYF1 115 aa7.74□□□□□ -1.17
ERCC1-203ENST00000340192 SMIM6P0DI80 62 aa7.73□□□□□ -1.17
ERCC1-203ENST00000340192 UBE2V1Q13404 147 aa7.73□□□□□ -1.17
ERCC1-203ENST00000340192 Q75L30 129 aa7.73□□□□□ -1.17
ERCC1-203ENST00000340192 M0R143 59 aa7.72□□□□□ -1.17
ERCC1-203ENST00000340192 CCKP06307 115 aa7.7□□□□□ -1.18
ERCC1-203ENST00000340192 ATP11AUNQ6ZP68 121 aa7.7□□□□□ -1.18
ERCC1-203ENST00000340192 SIGMAR1Q99720 223 aa7.69□□□□□ -1.18
ERCC1-203ENST00000340192 NAA38Q9BRA0 125 aaKnown RBP7.68□□□□□ -1.18
ERCC1-203ENST00000340192 BAALC-AS2P0C853 105 aa7.67□□□□□ -1.18
ERCC1-203ENST00000340192 RBM3P98179 157 aaKnown RBP7.67□□□□□ -1.18
ERCC1-203ENST00000340192 IGKV4-1P06312 121 aa7.66□□□□□ -1.18
ERCC1-203ENST00000340192 DSCR10P59022 87 aa7.66□□□□□ -1.18
ERCC1-203ENST00000340192 MT1HP80294 61 aa7.66□□□□□ -1.18
ERCC1-203ENST00000340192 C20orf166-AS1Q96NR2 134 aa7.66□□□□□ -1.18
ERCC1-203ENST00000340192 DSCR8Q96T75 97 aa7.65□□□□□ -1.18
ERCC1-203ENST00000340192 VPS25Q9BRG1 176 aa7.65□□□□□ -1.18
ERCC1-203ENST00000340192 KRTAP9-6A0A140TA67 174 aa7.64□□□□□ -1.19
ERCC1-203ENST00000340192 A8MUU9 505 aa7.64□□□□□ -1.19
ERCC1-203ENST00000340192 ATXN8Q156A1 80 aa7.64□□□□□ -1.19
ERCC1-203ENST00000340192 DEFB116Q30KQ4 102 aa7.64□□□□□ -1.19
ERCC1-203ENST00000340192 LINC00472Q9H8W2 130 aa7.64□□□□□ -1.19
ERCC1-203ENST00000340192 TSTD3H0UI37 97 aa7.63□□□□□ -1.19
ERCC1-203ENST00000340192 LINC00313P59037 77 aa7.62□□□□□ -1.19
ERCC1-203ENST00000340192 C9JAW5 83 aa7.61□□□□□ -1.19
ERCC1-203ENST00000340192 COX6B2Q6YFQ2 88 aa7.61□□□□□ -1.19
ERCC1-203ENST00000340192 LOC105371267A0A1B0GV96 52 aa7.6□□□□□ -1.19
ERCC1-203ENST00000340192 BATFQ16520 125 aa7.59□□□□□ -1.19
ERCC1-203ENST00000340192 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
ERCC1-203ENST00000340192 NOTCH2NLQ7Z3S9 236 aa7.58□□□□□ -1.2
ERCC1-203ENST00000340192 IGHV6-1A0A0B4J1U7 121 aa7.57□□□□□ -1.2
ERCC1-203ENST00000340192 FLGP20930 4061 aaPredicted RBP7.57□□□□□ -1.2
ERCC1-203ENST00000340192 JMJD7-PLA2G4BH0Y9G9 81 aa7.56□□□□□ -1.2
ERCC1-203ENST00000340192 LYRM7Q5U5X0 104 aa7.56□□□□□ -1.2
ERCC1-203ENST00000340192 C21orf62-AS1Q17RA5 79 aa7.55□□□□□ -1.2
ERCC1-203ENST00000340192 Q6ZQT0 140 aa7.55□□□□□ -1.2
ERCC1-203ENST00000340192 TRBV20-1A0A075B6N2 111 aa7.54□□□□□ -1.2
ERCC1-203ENST00000340192 LOC110117498A0A087WWA1 95 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms