RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 C1orf137Q5JT78 98 aa10.09□□□□□ -0.79
SCNN1A-202ENST00000338748 PKIGQ9Y2B9 76 aa10.09□□□□□ -0.79
SCNN1A-202ENST00000338748 A0A0G2JQZ4 141 aa10.08□□□□□ -0.8
SCNN1A-202ENST00000338748 UQCRQO14949 82 aa10.08□□□□□ -0.8
SCNN1A-202ENST00000338748 C9orf153Q5TBE3 101 aa10.07□□□□□ -0.8
SCNN1A-202ENST00000338748 C1orf134Q5TEV5 83 aa10.07□□□□□ -0.8
SCNN1A-202ENST00000338748 COX7CP15954 63 aa10.07□□□□□ -0.8
SCNN1A-202ENST00000338748 LINC00476Q8WZB0 136 aa10.06□□□□□ -0.8
SCNN1A-202ENST00000338748 PKD1P98161 4303 aa10.03□□□□□ -0.8
SCNN1A-202ENST00000338748 H0Y9J4 135 aa10.03□□□□□ -0.8
SCNN1A-202ENST00000338748 UBE2AP49459 152 aa10.03□□□□□ -0.8
SCNN1A-202ENST00000338748 Q8NBF4 154 aa10.03□□□□□ -0.8
SCNN1A-202ENST00000338748 WWC2-AS2Q96NR7 200 aa10.03□□□□□ -0.8
SCNN1A-202ENST00000338748 CXCL6P80162 114 aa10.02□□□□□ -0.81
SCNN1A-202ENST00000338748 KRTAP13-1Q8IUC0 172 aa10.02□□□□□ -0.81
SCNN1A-202ENST00000338748 BCE1O60756 84 aa10.02□□□□□ -0.81
SCNN1A-202ENST00000338748 SACSQ9NZJ4 4579 aa10.01□□□□□ -0.81
SCNN1A-202ENST00000338748 IGLV5-52A0A0A0MRZ9 124 aa10.01□□□□□ -0.81
SCNN1A-202ENST00000338748 Q8N9L7 120 aa10□□□□□ -0.81
SCNN1A-202ENST00000338748 NREPQ16612 68 aa9.99□□□□□ -0.81
SCNN1A-202ENST00000338748 IGFL1Q6UW32 110 aa9.99□□□□□ -0.81
SCNN1A-202ENST00000338748 SERP2Q8N6R1 65 aa9.99□□□□□ -0.81
SCNN1A-202ENST00000338748 SPRR4Q96PI1 79 aa9.99□□□□□ -0.81
SCNN1A-202ENST00000338748 F8WEM9 126 aa9.98□□□□□ -0.81
SCNN1A-202ENST00000338748 CRYGAP11844 174 aa9.97□□□□□ -0.81
SCNN1A-202ENST00000338748 CYSTM1Q9H1C7 97 aa9.96□□□□□ -0.82
SCNN1A-202ENST00000338748 PLAC8Q9NZF1 115 aa9.96□□□□□ -0.82
SCNN1A-202ENST00000338748 IGLV8-61A0A075B6I0 122 aa9.95□□□□□ -0.82
SCNN1A-202ENST00000338748 SPRR1BP22528 89 aa9.95□□□□□ -0.82
SCNN1A-202ENST00000338748 KRTAP10-2P60368 255 aa9.95□□□□□ -0.82
SCNN1A-202ENST00000338748 PSORS1C2Q9UIG4 136 aa9.94□□□□□ -0.82
SCNN1A-202ENST00000338748 BPY2O14599 106 aa9.93□□□□□ -0.82
SCNN1A-202ENST00000338748 LRP1BQ9NZR2 4599 aa9.93□□□□□ -0.82
SCNN1A-202ENST00000338748 PKHD1P08F94 4074 aa9.92□□□□□ -0.82
SCNN1A-202ENST00000338748 A0A1B0GW54 56 aa9.92□□□□□ -0.82
SCNN1A-202ENST00000338748 IGKV4-1P06312 121 aa9.92□□□□□ -0.82
SCNN1A-202ENST00000338748 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
SCNN1A-202ENST00000338748 FAM30AQ9NZY2 134 aa9.9□□□□□ -0.83
SCNN1A-202ENST00000338748 A0A087WSZ3 146 aa9.87□□□□□ -0.83
SCNN1A-202ENST00000338748 DSCR10P59022 87 aa9.85□□□□□ -0.83
SCNN1A-202ENST00000338748 DEFB116Q30KQ4 102 aa9.84□□□□□ -0.83
SCNN1A-202ENST00000338748 CIRBP-AS1Q8TBR5 109 aa9.83□□□□□ -0.84
SCNN1A-202ENST00000338748 ANAPC11Q9NYG5 84 aa9.83□□□□□ -0.84
SCNN1A-202ENST00000338748 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
SCNN1A-202ENST00000338748 IGLV9-49A0A0B4J1Y8 123 aa9.82□□□□□ -0.84
SCNN1A-202ENST00000338748 ZNF861PO60384 105 aa9.82□□□□□ -0.84
SCNN1A-202ENST00000338748 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
SCNN1A-202ENST00000338748 C20orf197Q8N268 126 aa9.82□□□□□ -0.84
SCNN1A-202ENST00000338748 TRAV7A0A075B6U4 112 aa9.81□□□□□ -0.84
SCNN1A-202ENST00000338748 K7EQZ3 153 aa9.81□□□□□ -0.84
SCNN1A-202ENST00000338748 KRTAP10-1P60331 282 aa9.8□□□□□ -0.84
SCNN1A-202ENST00000338748 TMEM258P61165 79 aa9.77□□□□□ -0.85
SCNN1A-202ENST00000338748 IGLV7-43P04211 117 aa9.76□□□□□ -0.85
SCNN1A-202ENST00000338748 Q6ZSA8 131 aa9.76□□□□□ -0.85
SCNN1A-202ENST00000338748 RPL37AP61513 92 aaKnown RBP9.74□□□□□ -0.85
SCNN1A-202ENST00000338748 C5orf47Q569G3 176 aa9.74□□□□□ -0.85
SCNN1A-202ENST00000338748 ZNF706Q9Y5V0 76 aaPredicted RBP9.74□□□□□ -0.85
SCNN1A-202ENST00000338748 MOBPQ13875 183 aa9.74□□□□□ -0.85
SCNN1A-202ENST00000338748 KMT2CQ8NEZ4 4911 aaKnown RBP9.73□□□□□ -0.85
SCNN1A-202ENST00000338748 SNURFQ9Y675 71 aa9.72□□□□□ -0.85
SCNN1A-202ENST00000338748 RPS28P62857 69 aaKnown RBP9.72□□□□□ -0.85
SCNN1A-202ENST00000338748 HRCT1Q6UXD1 115 aa9.72□□□□□ -0.85
SCNN1A-202ENST00000338748 OCR1Q9BZK8 76 aa9.72□□□□□ -0.85
SCNN1A-202ENST00000338748 LINC00472Q9H8W2 130 aa9.71□□□□□ -0.85
SCNN1A-202ENST00000338748 DYNC1H1Q14204 4646 aaKnown RBP9.71□□□□□ -0.85
SCNN1A-202ENST00000338748 J3KT08 172 aa9.71□□□□□ -0.86
SCNN1A-202ENST00000338748 RYR2Q92736 4967 aa9.7□□□□□ -0.86
SCNN1A-202ENST00000338748 H7BZZ5 65 aa9.67□□□□□ -0.86
SCNN1A-202ENST00000338748 KLKP1Q107X0 134 aa9.67□□□□□ -0.86
SCNN1A-202ENST00000338748 HCG22E2RYF7 251 aa9.66□□□□□ -0.86
SCNN1A-202ENST00000338748 Q96NJ1 140 aa9.66□□□□□ -0.86
SCNN1A-202ENST00000338748 OXTP01178 125 aa9.63□□□□□ -0.87
SCNN1A-202ENST00000338748 WFDC13Q8IUB5 93 aa9.63□□□□□ -0.87
SCNN1A-202ENST00000338748 PRR15Q8IV56 129 aa9.62□□□□□ -0.87
SCNN1A-202ENST00000338748 A8MWP4 228 aa9.62□□□□□ -0.87
SCNN1A-202ENST00000338748 APOBP04114 4563 aaKnown RBP9.61□□□□□ -0.87
SCNN1A-202ENST00000338748 FAM236DA0A1B0GTK5 79 aa9.61□□□□□ -0.87
SCNN1A-202ENST00000338748 FAM236CP0DP71 79 aa9.61□□□□□ -0.87
SCNN1A-202ENST00000338748 TMEM254Q8TBM7 123 aa9.6□□□□□ -0.87
SCNN1A-202ENST00000338748 LCE6AA0A183 80 aa9.6□□□□□ -0.87
SCNN1A-202ENST00000338748 FAT1Q14517 4588 aa9.6□□□□□ -0.87
SCNN1A-202ENST00000338748 A0A087X002 238 aa9.58□□□□□ -0.88
SCNN1A-202ENST00000338748 KRTAP29-1A8MX34 341 aaPredicted RBP9.58□□□□□ -0.88
SCNN1A-202ENST00000338748 NDUFC1O43677 76 aa9.57□□□□□ -0.88
SCNN1A-202ENST00000338748 A0A0U1RQV1 116 aa9.55□□□□□ -0.88
SCNN1A-202ENST00000338748 KRTAP13-2Q52LG2 175 aa9.54□□□□□ -0.88
SCNN1A-202ENST00000338748 MMP24-AS1A0A0U1RRL7 71 aa9.53□□□□□ -0.88
SCNN1A-202ENST00000338748 CASC2Q6XLA1 102 aa9.53□□□□□ -0.88
SCNN1A-202ENST00000338748 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.89
SCNN1A-202ENST00000338748 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
SCNN1A-202ENST00000338748 LINC00336Q6ZUF6 198 aa9.49□□□□□ -0.89
SCNN1A-202ENST00000338748 SERP1Q9Y6X1 66 aa9.49□□□□□ -0.89
SCNN1A-202ENST00000338748 ATP5EP56381 51 aaPredicted RBP9.48□□□□□ -0.89
SCNN1A-202ENST00000338748 NDUFB1O75438 58 aa9.48□□□□□ -0.89
SCNN1A-202ENST00000338748 SSBP3-AS1Q7Z2R9 100 aa9.48□□□□□ -0.89
SCNN1A-202ENST00000338748 IGHV6-1A0A0B4J1U7 121 aa9.46□□□□□ -0.89
SCNN1A-202ENST00000338748 SPINK6Q6UWN8 80 aa9.46□□□□□ -0.89
SCNN1A-202ENST00000338748 RYR3Q15413 4870 aa9.46□□□□□ -0.9
SCNN1A-202ENST00000338748 NOTCH2NLQ7Z3S9 236 aa9.46□□□□□ -0.9
SCNN1A-202ENST00000338748 A0A1B0GVX0 72 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms