RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 A0A1B0GX51 115 aa8.29□□□□□ -1.08
APOBEC3B-202ENST00000335760 Q8N377 158 aa8.29□□□□□ -1.08
APOBEC3B-202ENST00000335760 TAX1BP3O14907 124 aa8.27□□□□□ -1.09
APOBEC3B-202ENST00000335760 LAMTOR3Q9UHA4 124 aa8.27□□□□□ -1.09
APOBEC3B-202ENST00000335760 MOBPQ13875 183 aa8.26□□□□□ -1.09
APOBEC3B-202ENST00000335760 C9orf118A6NHY6 69 aa8.25□□□□□ -1.09
APOBEC3B-202ENST00000335760 H3BUT2 72 aa8.25□□□□□ -1.09
APOBEC3B-202ENST00000335760 C9orf153Q5TBE3 101 aa8.25□□□□□ -1.09
APOBEC3B-202ENST00000335760 SMIM29Q86T20 159 aa8.25□□□□□ -1.09
APOBEC3B-202ENST00000335760 DNAL4O96015 105 aa8.24□□□□□ -1.09
APOBEC3B-202ENST00000335760 OCIAD2Q56VL3 154 aa8.24□□□□□ -1.09
APOBEC3B-202ENST00000335760 LST1O00453 97 aa8.23□□□□□ -1.09
APOBEC3B-202ENST00000335760 COL5A1-AS1Q5SY13 56 aa8.23□□□□□ -1.09
APOBEC3B-202ENST00000335760 LCE2CQ5TA81 110 aa8.23□□□□□ -1.09
APOBEC3B-202ENST00000335760 Q8NBF4 154 aa8.22□□□□□ -1.09
APOBEC3B-202ENST00000335760 PPDPFLQ8WWR9 84 aa8.22□□□□□ -1.09
APOBEC3B-202ENST00000335760 TCL1BO95988 128 aa8.22□□□□□ -1.09
APOBEC3B-202ENST00000335760 TRACP01848 142 aa8.22□□□□□ -1.09
APOBEC3B-202ENST00000335760 LYRM7Q5U5X0 104 aa8.22□□□□□ -1.09
APOBEC3B-202ENST00000335760 SSBP3-AS1Q7Z2R9 100 aa8.22□□□□□ -1.09
APOBEC3B-202ENST00000335760 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.1
APOBEC3B-202ENST00000335760 GHRHP01286 108 aa8.21□□□□□ -1.1
APOBEC3B-202ENST00000335760 ATXN8Q156A1 80 aa8.21□□□□□ -1.1
APOBEC3B-202ENST00000335760 C4orf48Q5BLP8 95 aa8.21□□□□□ -1.1
APOBEC3B-202ENST00000335760 LINC00304Q8N9R0 145 aa8.21□□□□□ -1.1
APOBEC3B-202ENST00000335760 HERC1Q15751 4861 aa8.2□□□□□ -1.1
APOBEC3B-202ENST00000335760 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
APOBEC3B-202ENST00000335760 F8WEM9 126 aa8.2□□□□□ -1.1
APOBEC3B-202ENST00000335760 ORMDL1Q9P0S3 153 aa8.2□□□□□ -1.1
APOBEC3B-202ENST00000335760 FABP2P12104 132 aa8.19□□□□□ -1.1
APOBEC3B-202ENST00000335760 TRBV20-1A0A075B6N2 111 aa8.17□□□□□ -1.1
APOBEC3B-202ENST00000335760 H3BQ85 93 aa8.17□□□□□ -1.1
APOBEC3B-202ENST00000335760 NDUFV3P56181 108 aaKnown RBP8.16□□□□□ -1.1
APOBEC3B-202ENST00000335760 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
APOBEC3B-202ENST00000335760 TMEM256-PLSCR3K7ERE1 68 aa8.15□□□□□ -1.1
APOBEC3B-202ENST00000335760 IGLV8-61A0A075B6I0 122 aa8.13□□□□□ -1.11
APOBEC3B-202ENST00000335760 A0A0G2JQZ4 141 aa8.13□□□□□ -1.11
APOBEC3B-202ENST00000335760 BAALC-AS2P0C853 105 aa8.13□□□□□ -1.11
APOBEC3B-202ENST00000335760 HRCT1Q6UXD1 115 aa8.13□□□□□ -1.11
APOBEC3B-202ENST00000335760 H3BMG7 143 aa8.11□□□□□ -1.11
APOBEC3B-202ENST00000335760 SPINK1P00995 79 aa8.11□□□□□ -1.11
APOBEC3B-202ENST00000335760 UBE2V1Q13404 147 aa8.11□□□□□ -1.11
APOBEC3B-202ENST00000335760 Q6JHZ5 121 aa8.11□□□□□ -1.11
APOBEC3B-202ENST00000335760 SPCS1Q9Y6A9 102 aa8.11□□□□□ -1.11
APOBEC3B-202ENST00000335760 A0A1B0GV72 72 aa8.1□□□□□ -1.11
APOBEC3B-202ENST00000335760 C9JAW5 83 aa8.1□□□□□ -1.11
APOBEC3B-202ENST00000335760 IGFL1Q6UW32 110 aa8.1□□□□□ -1.11
APOBEC3B-202ENST00000335760 ANKRD29Q8N6D5 301 aa8.09□□□□□ -1.12
APOBEC3B-202ENST00000335760 CD164Q04900 197 aa8.08□□□□□ -1.12
APOBEC3B-202ENST00000335760 RPS29P62273 56 aaKnown RBP8.06□□□□□ -1.12
APOBEC3B-202ENST00000335760 MTURNQ8N3F0 131 aa8.06□□□□□ -1.12
APOBEC3B-202ENST00000335760 K7EP34 96 aa8.05□□□□□ -1.12
APOBEC3B-202ENST00000335760 HMCN2Q8NDA2 5059 aa8.05□□□□□ -1.12
APOBEC3B-202ENST00000335760 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
APOBEC3B-202ENST00000335760 RETNLBQ9BQ08 111 aa8.03□□□□□ -1.12
APOBEC3B-202ENST00000335760 LIMD2Q9BT23 127 aa8.03□□□□□ -1.12
APOBEC3B-202ENST00000335760 H3BT86 120 aa8.02□□□□□ -1.13
APOBEC3B-202ENST00000335760 RBM3P98179 157 aaKnown RBP8.02□□□□□ -1.13
APOBEC3B-202ENST00000335760 GTF2H5Q6ZYL4 71 aa8.01□□□□□ -1.13
APOBEC3B-202ENST00000335760 TRBV7-7A0A0K0K1E9 115 aa8□□□□□ -1.13
APOBEC3B-202ENST00000335760 PRR4Q16378 134 aa8□□□□□ -1.13
APOBEC3B-202ENST00000335760 DSCR8Q96T75 97 aa8□□□□□ -1.13
APOBEC3B-202ENST00000335760 JMJD7-PLA2G4BH0Y9G9 81 aa7.99□□□□□ -1.13
APOBEC3B-202ENST00000335760 Q6Q795 121 aa7.99□□□□□ -1.13
APOBEC3B-202ENST00000335760 TEN1Q86WV5 123 aa7.99□□□□□ -1.13
APOBEC3B-202ENST00000335760 TRBV7-4A0A0J9YYF1 115 aa7.98□□□□□ -1.13
APOBEC3B-202ENST00000335760 A0A1W2PNM2 257 aa7.98□□□□□ -1.13
APOBEC3B-202ENST00000335760 Q5XG85 94 aa7.97□□□□□ -1.13
APOBEC3B-202ENST00000335760 PRO0461Q9UI25 63 aa7.97□□□□□ -1.13
APOBEC3B-202ENST00000335760 CCKP06307 115 aa7.96□□□□□ -1.14
APOBEC3B-202ENST00000335760 OBSCN-AS1Q96MR7 158 aa7.96□□□□□ -1.14
APOBEC3B-202ENST00000335760 VPS25Q9BRG1 176 aa7.96□□□□□ -1.14
APOBEC3B-202ENST00000335760 A0A087WSZ3 146 aa7.94□□□□□ -1.14
APOBEC3B-202ENST00000335760 FP248Q71RG6 208 aaPredicted RBP7.94□□□□□ -1.14
APOBEC3B-202ENST00000335760 C14orf132Q9NPU4 83 aa7.94□□□□□ -1.14
APOBEC3B-202ENST00000335760 LOC110117498A0A087WWA1 95 aa7.93□□□□□ -1.14
APOBEC3B-202ENST00000335760 IGLV7-46A0A075B6I9 117 aa7.92□□□□□ -1.14
APOBEC3B-202ENST00000335760 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
APOBEC3B-202ENST00000335760 C1orf195Q5TG92 126 aa7.92□□□□□ -1.14
APOBEC3B-202ENST00000335760 Q6ZQT0 140 aa7.92□□□□□ -1.14
APOBEC3B-202ENST00000335760 PDE6GP18545 87 aa7.91□□□□□ -1.14
APOBEC3B-202ENST00000335760 SS18L2Q9UHA2 77 aa7.91□□□□□ -1.14
APOBEC3B-202ENST00000335760 A0A1B0GV90 55 aa7.9□□□□□ -1.14
APOBEC3B-202ENST00000335760 F8W1H4 67 aa7.9□□□□□ -1.14
APOBEC3B-202ENST00000335760 LPAP08519 4548 aa7.89□□□□□ -1.15
APOBEC3B-202ENST00000335760 C21orf62-AS1Q17RA5 79 aa7.85□□□□□ -1.15
APOBEC3B-202ENST00000335760 LRP2P98164 4655 aa7.85□□□□□ -1.15
APOBEC3B-202ENST00000335760 A0A1B0GW54 56 aa7.83□□□□□ -1.16
APOBEC3B-202ENST00000335760 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
APOBEC3B-202ENST00000335760 Q96NJ1 140 aa7.83□□□□□ -1.16
APOBEC3B-202ENST00000335760 KRTAP13-3Q3SY46 172 aa7.82□□□□□ -1.16
APOBEC3B-202ENST00000335760 ETDBQ3ZM63 59 aa7.82□□□□□ -1.16
APOBEC3B-202ENST00000335760 DEFB116Q30KQ4 102 aa7.79□□□□□ -1.16
APOBEC3B-202ENST00000335760 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
APOBEC3B-202ENST00000335760 LINC00472Q9H8W2 130 aa7.79□□□□□ -1.16
APOBEC3B-202ENST00000335760 IGKV4-1P06312 121 aa7.78□□□□□ -1.16
APOBEC3B-202ENST00000335760 C9orf92A6NGG3 77 aa7.77□□□□□ -1.17
APOBEC3B-202ENST00000335760 SIGMAR1Q99720 223 aa7.77□□□□□ -1.17
APOBEC3B-202ENST00000335760 NREPQ16612 68 aa7.75□□□□□ -1.17
APOBEC3B-202ENST00000335760 J3KT08 172 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms