RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 ZNF462Q96JM2 2506 aa3.78□□□□□ -1.8
CPEB4-202ENST00000334035 JMJD1CQ15652 2540 aa3.77□□□□□ -1.81
CPEB4-202ENST00000334035 ANKRD11Q6UB99 2663 aaPredicted RBP3.76□□□□□ -1.81
CPEB4-202ENST00000334035 USP9YO00507 2555 aaPredicted RBP3.76□□□□□ -1.81
CPEB4-202ENST00000334035 Q6ZRN7 208 aaPredicted RBP3.76□□□□□ -1.81
CPEB4-202ENST00000334035 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
CPEB4-202ENST00000334035 Q5VSD8 79 aa3.74□□□□□ -1.81
CPEB4-202ENST00000334035 CHD8Q9HCK8 2581 aa3.74□□□□□ -1.81
CPEB4-202ENST00000334035 CEP295Q9C0D2 2601 aa3.73□□□□□ -1.81
CPEB4-202ENST00000334035 KRTAP10-1P60331 282 aa3.73□□□□□ -1.81
CPEB4-202ENST00000334035 CENPFP49454 3210 aa3.73□□□□□ -1.81
CPEB4-202ENST00000334035 SEC61BP60468 96 aaKnown RBP3.71□□□□□ -1.82
CPEB4-202ENST00000334035 MYO18BQ8IUG5 2567 aa3.71□□□□□ -1.82
CPEB4-202ENST00000334035 PKD1L2Q7Z442 2459 aa3.71□□□□□ -1.82
CPEB4-202ENST00000334035 KRTAP10-2P60368 255 aa3.71□□□□□ -1.82
CPEB4-202ENST00000334035 C20orf166-AS1Q96NR2 134 aa3.7□□□□□ -1.82
CPEB4-202ENST00000334035 PP632Q6XCG6 107 aa3.7□□□□□ -1.82
CPEB4-202ENST00000334035 ZFYVE26Q68DK2 2539 aa3.7□□□□□ -1.82
CPEB4-202ENST00000334035 KRTAP13-2Q52LG2 175 aa3.7□□□□□ -1.82
CPEB4-202ENST00000334035 DNAH12Q6ZR08 3092 aa3.69□□□□□ -1.82
CPEB4-202ENST00000334035 F8P00451 2351 aa3.68□□□□□ -1.82
CPEB4-202ENST00000334035 H0YAA0 97 aa3.66□□□□□ -1.82
CPEB4-202ENST00000334035 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
CPEB4-202ENST00000334035 FASNP49327 2511 aaKnown RBP3.65□□□□□ -1.82
CPEB4-202ENST00000334035 KRTAP13-3Q3SY46 172 aa3.65□□□□□ -1.83
CPEB4-202ENST00000334035 GOLGB1Q14789 3259 aaKnown RBP3.65□□□□□ -1.83
CPEB4-202ENST00000334035 SPTBN4Q9H254 2564 aa3.64□□□□□ -1.83
CPEB4-202ENST00000334035 POLQO75417 2590 aa3.62□□□□□ -1.83
CPEB4-202ENST00000334035 MTORP42345 2549 aa3.62□□□□□ -1.83
CPEB4-202ENST00000334035 P0C880 135 aa3.61□□□□□ -1.83
CPEB4-202ENST00000334035 SETD2Q9BYW2 2564 aaPredicted RBP3.6□□□□□ -1.83
CPEB4-202ENST00000334035 CHD9Q3L8U1 2897 aa3.57□□□□□ -1.84
CPEB4-202ENST00000334035 CHD7Q9P2D1 2997 aa3.57□□□□□ -1.84
CPEB4-202ENST00000334035 KRTAP21-3Q3LHN1 58 aa3.57□□□□□ -1.84
CPEB4-202ENST00000334035 HECTD1Q9ULT8 2610 aa3.56□□□□□ -1.84
CPEB4-202ENST00000334035 TNP1P09430 55 aa3.55□□□□□ -1.84
CPEB4-202ENST00000334035 ACANP16112 2415 aa3.55□□□□□ -1.84
CPEB4-202ENST00000334035 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
CPEB4-202ENST00000334035 C10orf95Q9H7T3 257 aa3.54□□□□□ -1.84
CPEB4-202ENST00000334035 C5orf42Q9H799 3197 aa3.54□□□□□ -1.84
CPEB4-202ENST00000334035 EPG5Q9HCE0 2579 aa3.53□□□□□ -1.84
CPEB4-202ENST00000334035 UTRNP46939 3433 aa3.52□□□□□ -1.85
CPEB4-202ENST00000334035 TRANK1O15050 2925 aa3.52□□□□□ -1.85
CPEB4-202ENST00000334035 FLNAP21333 2647 aaKnown RBP3.51□□□□□ -1.85
CPEB4-202ENST00000334035 A0A0C4DFX4 3053 aa3.49□□□□□ -1.85
CPEB4-202ENST00000334035 FLNBO75369 2602 aaKnown RBP3.48□□□□□ -1.85
CPEB4-202ENST00000334035 HTTP42858 3142 aa3.47□□□□□ -1.85
CPEB4-202ENST00000334035 CEP350Q5VT06 3117 aa3.46□□□□□ -1.86
CPEB4-202ENST00000334035 PRRC2CQ9Y520 2896 aaKnown RBP3.44□□□□□ -1.86
CPEB4-202ENST00000334035 ITPR3Q14573 2671 aa3.44□□□□□ -1.86
CPEB4-202ENST00000334035 XP32Q5T750 250 aa3.44□□□□□ -1.86
CPEB4-202ENST00000334035 HELZ2Q9BYK8 2649 aaKnown RBP3.42□□□□□ -1.86
CPEB4-202ENST00000334035 MGAM2Q2M2H8 2515 aa3.39□□□□□ -1.87
CPEB4-202ENST00000334035 PCNTO95613 3336 aa3.39□□□□□ -1.87
CPEB4-202ENST00000334035 GCN1Q92616 2671 aaKnown RBP3.39□□□□□ -1.87
CPEB4-202ENST00000334035 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
CPEB4-202ENST00000334035 ATRQ13535 2644 aa3.38□□□□□ -1.87
CPEB4-202ENST00000334035 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
CPEB4-202ENST00000334035 CHD6Q8TD26 2715 aa3.37□□□□□ -1.87
CPEB4-202ENST00000334035 UNC79Q9P2D8 2635 aa3.37□□□□□ -1.87
CPEB4-202ENST00000334035 BAHCC1Q9P281 2608 aa3.36□□□□□ -1.87
CPEB4-202ENST00000334035 CENPEQ02224 2701 aa3.36□□□□□ -1.87
CPEB4-202ENST00000334035 KMT2BQ9UMN6 2715 aaPredicted RBP3.36□□□□□ -1.87
CPEB4-202ENST00000334035 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
CPEB4-202ENST00000334035 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
CPEB4-202ENST00000334035 MKI67P46013 3256 aaKnown RBP3.35□□□□□ -1.87
CPEB4-202ENST00000334035 KRTAP15-1Q3LI76 137 aa3.35□□□□□ -1.87
CPEB4-202ENST00000334035 ZNF292O60281 2723 aa3.34□□□□□ -1.87
CPEB4-202ENST00000334035 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
CPEB4-202ENST00000334035 CFAP54Q96N23 3096 aa3.33□□□□□ -1.88
CPEB4-202ENST00000334035 KRTAP3-1Q9BYR8 98 aa3.32□□□□□ -1.88
CPEB4-202ENST00000334035 AKAP13Q12802 2813 aa3.32□□□□□ -1.88
CPEB4-202ENST00000334035 DMBT1Q9UGM3 2413 aaPredicted RBP3.3□□□□□ -1.88
CPEB4-202ENST00000334035 USP24Q9UPU5 2620 aa3.29□□□□□ -1.88
CPEB4-202ENST00000334035 TRIOO75962 3097 aa3.29□□□□□ -1.88
CPEB4-202ENST00000334035 MGAQ8IWI9 3026 aa3.28□□□□□ -1.88
CPEB4-202ENST00000334035 INE1O15225 51 aa3.28□□□□□ -1.88
CPEB4-202ENST00000334035 NBEAL1Q6ZS30 2694 aa3.28□□□□□ -1.88
CPEB4-202ENST00000334035 MAST4O15021 2626 aa3.28□□□□□ -1.88
CPEB4-202ENST00000334035 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
CPEB4-202ENST00000334035 CFAP46Q8IYW2 2715 aa3.28□□□□□ -1.88
CPEB4-202ENST00000334035 UNC80Q8N2C7 3258 aa3.27□□□□□ -1.89
CPEB4-202ENST00000334035 TEP1Q99973 2627 aaKnown RBP3.27□□□□□ -1.89
CPEB4-202ENST00000334035 SETXQ7Z333 2677 aaKnown RBP3.27□□□□□ -1.89
CPEB4-202ENST00000334035 NBEAL2Q6ZNJ1 2754 aa3.26□□□□□ -1.89
CPEB4-202ENST00000334035 DNAH14Q0VDD8 3507 aa3.25□□□□□ -1.89
CPEB4-202ENST00000334035 FRYQ5TBA9 3013 aa3.24□□□□□ -1.89
CPEB4-202ENST00000334035 MAP1AP78559 2803 aaPredicted RBP3.23□□□□□ -1.89
CPEB4-202ENST00000334035 BRCA2P51587 3418 aa3.23□□□□□ -1.89
CPEB4-202ENST00000334035 ZZEF1O43149 2961 aa3.23□□□□□ -1.89
CPEB4-202ENST00000334035 A0A1B0GVY2 172 aa3.23□□□□□ -1.89
CPEB4-202ENST00000334035 NSD1Q96L73 2696 aaPredicted RBP3.22□□□□□ -1.89
CPEB4-202ENST00000334035 TEX15Q9BXT5 2789 aa3.22□□□□□ -1.89
CPEB4-202ENST00000334035 STAB2Q8WWQ8 2551 aa3.21□□□□□ -1.9
CPEB4-202ENST00000334035 KRTAP23-1A1A580 65 aa3.21□□□□□ -1.9
CPEB4-202ENST00000334035 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
CPEB4-202ENST00000334035 KALRNO60229 2985 aa3.2□□□□□ -1.9
CPEB4-202ENST00000334035 LAMA2P24043 3122 aaKnown RBP3.19□□□□□ -1.9
CPEB4-202ENST00000334035 FLG2Q5D862 2391 aaPredicted RBP3.19□□□□□ -1.9
CPEB4-202ENST00000334035 IGSF10Q6WRI0 2623 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms