RNA–Protein interactions for RNA: ENST00000333039.2

NPTXR-201, Transcript of neuronal pentraxin receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPTXR, Length 5,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTXR-201ENST00000333039 Q5VV11 94 aa13.17□□□□□ -0.3
NPTXR-201ENST00000333039 SPINK7P58062 85 aa13.16□□□□□ -0.3
NPTXR-201ENST00000333039 LINC00483Q53H64 154 aa13.12□□□□□ -0.31
NPTXR-201ENST00000333039 KRTAP10-1P60331 282 aa13.1□□□□□ -0.31
NPTXR-201ENST00000333039 KRTAP10-2P60368 255 aa13.07□□□□□ -0.32
NPTXR-201ENST00000333039 ATRQ13535 2644 aa13.07□□□□□ -0.32
NPTXR-201ENST00000333039 PRAC1Q96KF2 57 aa13.07□□□□□ -0.32
NPTXR-201ENST00000333039 Q5VSD8 79 aa13.05□□□□□ -0.32
NPTXR-201ENST00000333039 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
NPTXR-201ENST00000333039 KRTAP4-16G5E9R7 235 aaPredicted RBP13□□□□□ -0.33
NPTXR-201ENST00000333039 HELZ2Q9BYK8 2649 aaKnown RBP12.98□□□□□ -0.33
NPTXR-201ENST00000333039 R4GN34 69 aa12.97□□□□□ -0.33
NPTXR-201ENST00000333039 PANO1I0J062 215 aa12.96□□□□□ -0.33
NPTXR-201ENST00000333039 SEC61BP60468 96 aaKnown RBP12.96□□□□□ -0.34
NPTXR-201ENST00000333039 LCE6AA0A183 80 aa12.96□□□□□ -0.34
NPTXR-201ENST00000333039 OXTP01178 125 aa12.94□□□□□ -0.34
NPTXR-201ENST00000333039 MAST4O15021 2626 aa12.92□□□□□ -0.34
NPTXR-201ENST00000333039 Q6ZR54 194 aa12.92□□□□□ -0.34
NPTXR-201ENST00000333039 PCNTO95613 3336 aa12.89□□□□□ -0.35
NPTXR-201ENST00000333039 CFAP46Q8IYW2 2715 aa12.87□□□□□ -0.35
NPTXR-201ENST00000333039 KRTAP29-1A8MX34 341 aaPredicted RBP12.86□□□□□ -0.35
NPTXR-201ENST00000333039 HTTP42858 3142 aa12.86□□□□□ -0.35
NPTXR-201ENST00000333039 H1FX-AS1Q4G0G2 97 aa12.85□□□□□ -0.35
NPTXR-201ENST00000333039 RPL37P61927 97 aaKnown RBP12.84□□□□□ -0.35
NPTXR-201ENST00000333039 ROMO1P60602 79 aa12.8□□□□□ -0.36
NPTXR-201ENST00000333039 A0A087X002 238 aa12.79□□□□□ -0.36
NPTXR-201ENST00000333039 M0QZ58 72 aa12.76□□□□□ -0.37
NPTXR-201ENST00000333039 TRANK1O15050 2925 aa12.7□□□□□ -0.38
NPTXR-201ENST00000333039 NOTCH2NLQ7Z3S9 236 aa12.69□□□□□ -0.38
NPTXR-201ENST00000333039 ADM2Q7Z4H4 148 aa12.68□□□□□ -0.38
NPTXR-201ENST00000333039 KRTAP11-1Q8IUC1 163 aa12.68□□□□□ -0.38
NPTXR-201ENST00000333039 CFAP54Q96N23 3096 aa12.68□□□□□ -0.38
NPTXR-201ENST00000333039 SPATA8Q6RVD6 105 aa12.68□□□□□ -0.38
NPTXR-201ENST00000333039 MGAQ8IWI9 3026 aa12.67□□□□□ -0.38
NPTXR-201ENST00000333039 MKI67P46013 3256 aaKnown RBP12.63□□□□□ -0.39
NPTXR-201ENST00000333039 CENPEQ02224 2701 aa12.63□□□□□ -0.39
NPTXR-201ENST00000333039 CHD6Q8TD26 2715 aa12.61□□□□□ -0.39
NPTXR-201ENST00000333039 RANBP2P49792 3224 aaKnown RBP12.61□□□□□ -0.39
NPTXR-201ENST00000333039 ASB16-AS1Q495Z4 193 aa12.6□□□□□ -0.39
NPTXR-201ENST00000333039 Q6ZRN7 208 aaPredicted RBP12.59□□□□□ -0.39
NPTXR-201ENST00000333039 KRTAP7-1Q8IUC3 87 aa12.58□□□□□ -0.4
NPTXR-201ENST00000333039 H3BS24 57 aa12.57□□□□□ -0.4
NPTXR-201ENST00000333039 A0A0A0MQY5 61 aa12.56□□□□□ -0.4
NPTXR-201ENST00000333039 RPS29P62273 56 aaKnown RBP12.52□□□□□ -0.4
NPTXR-201ENST00000333039 ZNF292O60281 2723 aa12.52□□□□□ -0.41
NPTXR-201ENST00000333039 TEX15Q9BXT5 2789 aa12.51□□□□□ -0.41
NPTXR-201ENST00000333039 AKAP13Q12802 2813 aa12.51□□□□□ -0.41
NPTXR-201ENST00000333039 A0A0C4DFX4 3053 aa12.5□□□□□ -0.41
NPTXR-201ENST00000333039 LAMA3Q16787 3333 aa12.49□□□□□ -0.41
NPTXR-201ENST00000333039 GCN1Q92616 2671 aaKnown RBP12.49□□□□□ -0.41
NPTXR-201ENST00000333039 PLAC4Q8WY50 150 aa12.49□□□□□ -0.41
NPTXR-201ENST00000333039 NBEAL1Q6ZS30 2694 aa12.46□□□□□ -0.42
NPTXR-201ENST00000333039 STAB1Q9NY15 2570 aa12.42□□□□□ -0.42
NPTXR-201ENST00000333039 KRTAP13-1Q8IUC0 172 aa12.41□□□□□ -0.42
NPTXR-201ENST00000333039 KRTAP13-2Q52LG2 175 aa12.41□□□□□ -0.42
NPTXR-201ENST00000333039 UNC79Q9P2D8 2635 aa12.37□□□□□ -0.43
NPTXR-201ENST00000333039 BRCA2P51587 3418 aa12.33□□□□□ -0.44
NPTXR-201ENST00000333039 WDFY4Q6ZS81 3184 aa12.33□□□□□ -0.44
NPTXR-201ENST00000333039 TEP1Q99973 2627 aaKnown RBP12.33□□□□□ -0.44
NPTXR-201ENST00000333039 TRIOO75962 3097 aa12.32□□□□□ -0.44
NPTXR-201ENST00000333039 A8MU10 97 aa12.31□□□□□ -0.44
NPTXR-201ENST00000333039 LAMA2P24043 3122 aaKnown RBP12.31□□□□□ -0.44
NPTXR-201ENST00000333039 A6NN06 94 aa12.27□□□□□ -0.45
NPTXR-201ENST00000333039 NBEAL2Q6ZNJ1 2754 aa12.27□□□□□ -0.45
NPTXR-201ENST00000333039 COL6A5A8TX70 2615 aa12.27□□□□□ -0.45
NPTXR-201ENST00000333039 A8MUU9 505 aa12.26□□□□□ -0.45
NPTXR-201ENST00000333039 IGSF10Q6WRI0 2623 aa12.24□□□□□ -0.45
NPTXR-201ENST00000333039 SETXQ7Z333 2677 aaKnown RBP12.23□□□□□ -0.45
NPTXR-201ENST00000333039 KRTAP25-1Q3LHN0 102 aa12.21□□□□□ -0.45
NPTXR-201ENST00000333039 DSPP15924 2871 aaKnown RBP12.19□□□□□ -0.46
NPTXR-201ENST00000333039 NOTCH1P46531 2555 aa12.16□□□□□ -0.46
NPTXR-201ENST00000333039 PRUNE2Q8WUY3 3088 aa12.15□□□□□ -0.46
NPTXR-201ENST00000333039 UNC80Q8N2C7 3258 aa12.15□□□□□ -0.47
NPTXR-201ENST00000333039 FRYQ5TBA9 3013 aa12.13□□□□□ -0.47
NPTXR-201ENST00000333039 DMBT1Q9UGM3 2413 aaPredicted RBP12.12□□□□□ -0.47
NPTXR-201ENST00000333039 XIRP2A4UGR9 3374 aa12.1□□□□□ -0.47
NPTXR-201ENST00000333039 FLG2Q5D862 2391 aaPredicted RBP12.06□□□□□ -0.48
NPTXR-201ENST00000333039 CDH23Q9H251 3354 aa12.04□□□□□ -0.48
NPTXR-201ENST00000333039 C20orf166-AS1Q96NR2 134 aa12.04□□□□□ -0.48
NPTXR-201ENST00000333039 VPS13AQ96RL7 3174 aa12.02□□□□□ -0.49
NPTXR-201ENST00000333039 ITPR2Q14571 2701 aa11.99□□□□□ -0.49
NPTXR-201ENST00000333039 UBR5O95071 2799 aaPredicted RBP11.99□□□□□ -0.49
NPTXR-201ENST00000333039 MAP1AP78559 2803 aaPredicted RBP11.96□□□□□ -0.5
NPTXR-201ENST00000333039 BAHCC1Q9P281 2608 aa11.93□□□□□ -0.5
NPTXR-201ENST00000333039 CELSR3Q9NYQ7 3312 aa11.93□□□□□ -0.5
NPTXR-201ENST00000333039 NSD1Q96L73 2696 aaPredicted RBP11.91□□□□□ -0.5
NPTXR-201ENST00000333039 KALRNO60229 2985 aa11.86□□□□□ -0.51
NPTXR-201ENST00000333039 KRTAP21-3Q3LHN1 58 aa11.86□□□□□ -0.51
NPTXR-201ENST00000333039 ITPR1Q14643 2758 aa11.86□□□□□ -0.51
NPTXR-201ENST00000333039 KRTAP16-1A8MUX0 517 aa11.86□□□□□ -0.51
NPTXR-201ENST00000333039 STAB2Q8WWQ8 2551 aa11.84□□□□□ -0.51
NPTXR-201ENST00000333039 KMT2BQ9UMN6 2715 aaPredicted RBP11.83□□□□□ -0.52
NPTXR-201ENST00000333039 TNP1P09430 55 aa11.81□□□□□ -0.52
NPTXR-201ENST00000333039 KRTAP1-4P0C5Y4 121 aa11.79□□□□□ -0.52
NPTXR-201ENST00000333039 DNAH14Q0VDD8 3507 aa11.77□□□□□ -0.53
NPTXR-201ENST00000333039 FREM2Q5SZK8 3169 aa11.76□□□□□ -0.53
NPTXR-201ENST00000333039 SZT2Q5T011 3432 aa11.74□□□□□ -0.53
NPTXR-201ENST00000333039 NDUFAF8A1L188 74 aa11.74□□□□□ -0.53
NPTXR-201ENST00000333039 LRBAP50851 2863 aa11.74□□□□□ -0.53
NPTXR-201ENST00000333039 ATMQ13315 3056 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms