RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 FLG2Q5D862 2391 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-201ENST00000331134 ANAPC11Q9NYG5 84 aa12.26□□□□□ -0.45
NPLOC4-201ENST00000331134 LOC101927531A0A1B0GV80 90 aa12.25□□□□□ -0.45
NPLOC4-201ENST00000331134 OCR1Q9BZK8 76 aa12.25□□□□□ -0.45
NPLOC4-201ENST00000331134 MRPL34Q9BQ48 92 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-201ENST00000331134 SMG1Q96Q15 3661 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-201ENST00000331134 IGSF10Q6WRI0 2623 aa12.23□□□□□ -0.45
NPLOC4-201ENST00000331134 LINC00313P59037 77 aa12.23□□□□□ -0.45
NPLOC4-201ENST00000331134 DMBT1Q9UGM3 2413 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-201ENST00000331134 UTP20O75691 2785 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-201ENST00000331134 CELSR2Q9HCU4 2923 aa12.21□□□□□ -0.45
NPLOC4-201ENST00000331134 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.45
NPLOC4-201ENST00000331134 Q5XG85 94 aa12.21□□□□□ -0.45
NPLOC4-201ENST00000331134 CYP4F30PQ9H0H9 118 aa12.21□□□□□ -0.46
NPLOC4-201ENST00000331134 KRTAP10-11P60412 298 aa12.2□□□□□ -0.46
NPLOC4-201ENST00000331134 C8orf17Q9NRJ1 99 aa12.2□□□□□ -0.46
NPLOC4-201ENST00000331134 C8orf87E5RJ46 101 aa12.19□□□□□ -0.46
NPLOC4-201ENST00000331134 RTL8CO15255 209 aa12.18□□□□□ -0.46
NPLOC4-201ENST00000331134 IGLV5-48A0A075B6I7 105 aa12.17□□□□□ -0.46
NPLOC4-201ENST00000331134 FAM229BQ4G0N7 80 aa12.17□□□□□ -0.46
NPLOC4-201ENST00000331134 FP248Q71RG6 208 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-201ENST00000331134 OXTP01178 125 aa12.16□□□□□ -0.46
NPLOC4-201ENST00000331134 ZANQ9Y493 2812 aa12.14□□□□□ -0.47
NPLOC4-201ENST00000331134 DSCR10P59022 87 aa12.14□□□□□ -0.47
NPLOC4-201ENST00000331134 HIVEP1P15822 2718 aa12.11□□□□□ -0.47
NPLOC4-201ENST00000331134 PRR26Q8N8Z3 221 aa12.1□□□□□ -0.47
NPLOC4-201ENST00000331134 WIPF1O43516 503 aa12.1□□□□□ -0.47
NPLOC4-201ENST00000331134 RELNP78509 3460 aa12.09□□□□□ -0.47
NPLOC4-201ENST00000331134 CD164Q04900 197 aa12.09□□□□□ -0.47
NPLOC4-201ENST00000331134 A0A1B0GVX0 72 aa12.08□□□□□ -0.47
NPLOC4-201ENST00000331134 Q96NJ1 140 aa12.08□□□□□ -0.48
NPLOC4-201ENST00000331134 FAM229AH3BQW9 127 aa12.08□□□□□ -0.48
NPLOC4-201ENST00000331134 TLX1NBP0CAT3 122 aa12.08□□□□□ -0.48
NPLOC4-201ENST00000331134 KRTAP1-3Q8IUG1 177 aa12.08□□□□□ -0.48
NPLOC4-201ENST00000331134 UQCR11O14957 56 aa12.07□□□□□ -0.48
NPLOC4-201ENST00000331134 KTN1-AS1Q86SY8 53 aa12.05□□□□□ -0.48
NPLOC4-201ENST00000331134 K7EIL1 84 aa12.03□□□□□ -0.48
NPLOC4-201ENST00000331134 PLA2G2DQ9UNK4 145 aa12.02□□□□□ -0.48
NPLOC4-201ENST00000331134 TYMSOSQ8TAI1 123 aa12.02□□□□□ -0.49
NPLOC4-201ENST00000331134 CSMD1Q96PZ7 3565 aa12.02□□□□□ -0.49
NPLOC4-201ENST00000331134 C9orf163Q8N9P6 203 aa12.02□□□□□ -0.49
NPLOC4-201ENST00000331134 APCP25054 2843 aa12.01□□□□□ -0.49
NPLOC4-201ENST00000331134 MIR22HGQ0VDD5 57 aa12□□□□□ -0.49
NPLOC4-201ENST00000331134 KRTAP1-1Q07627 177 aa12□□□□□ -0.49
NPLOC4-201ENST00000331134 SPENQ96T58 3664 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-201ENST00000331134 Q1T7F1 81 aa11.97□□□□□ -0.49
NPLOC4-201ENST00000331134 SPANXA2-OT1Q8N9U9 137 aa11.97□□□□□ -0.49
NPLOC4-201ENST00000331134 SSBP3-AS1Q7Z2R9 100 aa11.96□□□□□ -0.49
NPLOC4-201ENST00000331134 SPRR4Q96PI1 79 aa11.96□□□□□ -0.49
NPLOC4-201ENST00000331134 ZNF861PO60384 105 aa11.96□□□□□ -0.5
NPLOC4-201ENST00000331134 ITPR2Q14571 2701 aa11.95□□□□□ -0.5
NPLOC4-201ENST00000331134 NF1P21359 2839 aa11.95□□□□□ -0.5
NPLOC4-201ENST00000331134 PLA2G1BP04054 148 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-201ENST00000331134 PSORS1C2Q9UIG4 136 aa11.93□□□□□ -0.5
NPLOC4-201ENST00000331134 DCHS2Q6V1P9 2916 aa11.92□□□□□ -0.5
NPLOC4-201ENST00000331134 CDC42SE1Q9NRR8 79 aa11.9□□□□□ -0.5
NPLOC4-201ENST00000331134 FBN2P35556 2912 aa11.89□□□□□ -0.51
NPLOC4-201ENST00000331134 LCA10Q71F78 164 aa11.89□□□□□ -0.51
NPLOC4-201ENST00000331134 SVEP1Q4LDE5 3571 aa11.88□□□□□ -0.51
NPLOC4-201ENST00000331134 SPINT4Q6UDR6 99 aa11.87□□□□□ -0.51
NPLOC4-201ENST00000331134 Q8N9P0 234 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-201ENST00000331134 Q8N1X5 172 aa11.86□□□□□ -0.51
NPLOC4-201ENST00000331134 A0A087WTM6 91 aa11.86□□□□□ -0.51
NPLOC4-201ENST00000331134 CNBPP62633 177 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-201ENST00000331134 IGLV5-37A0A075B6J1 123 aa11.85□□□□□ -0.51
NPLOC4-201ENST00000331134 NIPBLQ6KC79 2804 aaeCLIP11.83□□□□□ -0.52
NPLOC4-201ENST00000331134 C9orf92A6NGG3 77 aa11.81□□□□□ -0.52
NPLOC4-201ENST00000331134 HRNRQ86YZ3 2850 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-201ENST00000331134 RBM12B-AS1Q9P1G2 102 aa11.8□□□□□ -0.52
NPLOC4-201ENST00000331134 IGLV7-46A0A075B6I9 117 aa11.79□□□□□ -0.52
NPLOC4-201ENST00000331134 PRAC1Q96KF2 57 aa11.77□□□□□ -0.53
NPLOC4-201ENST00000331134 Q5VV11 94 aa11.76□□□□□ -0.53
NPLOC4-201ENST00000331134 IGLV7-43P04211 117 aa11.75□□□□□ -0.53
NPLOC4-201ENST00000331134 KMT2BQ9UMN6 2715 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-201ENST00000331134 MMP24-AS1A0A0U1RRL7 71 aa11.74□□□□□ -0.53
NPLOC4-201ENST00000331134 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-201ENST00000331134 SPRR1AP35321 89 aa11.74□□□□□ -0.53
NPLOC4-201ENST00000331134 SMR3BP02814 79 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-201ENST00000331134 CRYBG3Q68DQ2 2970 aa11.72□□□□□ -0.53
NPLOC4-201ENST00000331134 APLNQ9ULZ1 77 aa11.71□□□□□ -0.53
NPLOC4-201ENST00000331134 Q75L30 129 aa11.7□□□□□ -0.54
NPLOC4-201ENST00000331134 HRES1P13985 223 aa11.7□□□□□ -0.54
NPLOC4-201ENST00000331134 SPINK7P58062 85 aa11.67□□□□□ -0.54
NPLOC4-201ENST00000331134 A0A0D9SG42 100 aa11.66□□□□□ -0.54
NPLOC4-201ENST00000331134 CELSR1Q9NYQ6 3014 aa11.65□□□□□ -0.54
NPLOC4-201ENST00000331134 LINC00304Q8N9R0 145 aa11.65□□□□□ -0.55
NPLOC4-201ENST00000331134 LINC00472Q9H8W2 130 aa11.64□□□□□ -0.55
NPLOC4-201ENST00000331134 KRTAP26-1Q6PEX3 210 aa11.63□□□□□ -0.55
NPLOC4-201ENST00000331134 LINC01558Q9Y6Z2 57 aa11.62□□□□□ -0.55
NPLOC4-201ENST00000331134 KRTAP1-5Q9BYS1 174 aa11.57□□□□□ -0.56
NPLOC4-201ENST00000331134 BSNQ9UPA5 3926 aa11.56□□□□□ -0.56
NPLOC4-201ENST00000331134 TNP2Q05952 138 aa11.56□□□□□ -0.56
NPLOC4-201ENST00000331134 CRIPTQ9P021 101 aa11.54□□□□□ -0.56
NPLOC4-201ENST00000331134 LINC01554Q52M75 96 aa11.51□□□□□ -0.57
NPLOC4-201ENST00000331134 WWC2-AS2Q96NR7 200 aa11.49□□□□□ -0.57
NPLOC4-201ENST00000331134 KRTAP4-16G5E9R7 235 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-201ENST00000331134 SPRR1BP22528 89 aa11.44□□□□□ -0.58
NPLOC4-201ENST00000331134 TENM4Q6N022 2769 aa11.44□□□□□ -0.58
NPLOC4-201ENST00000331134 Q5W150 140 aa11.43□□□□□ -0.58
NPLOC4-201ENST00000331134 CUBNO60494 3623 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms