RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 CASC10Q5T4H9 136 aa9.22□□□□□ -0.93
SNX20-202ENST00000330943 MRPL55Q7Z7F7 128 aaKnown RBP9.22□□□□□ -0.93
SNX20-202ENST00000330943 PSPHP1O15172 72 aa9.21□□□□□ -0.93
SNX20-202ENST00000330943 WFDC13Q8IUB5 93 aa9.21□□□□□ -0.94
SNX20-202ENST00000330943 V9GYY9 64 aa9.2□□□□□ -0.94
SNX20-202ENST00000330943 DNAH10OSP0CZ25 163 aa9.19□□□□□ -0.94
SNX20-202ENST00000330943 CYP4F30PQ9H0H9 118 aa9.18□□□□□ -0.94
SNX20-202ENST00000330943 REG3GQ6UW15 175 aa9.18□□□□□ -0.94
SNX20-202ENST00000330943 IGFL1Q6UW32 110 aa9.18□□□□□ -0.94
SNX20-202ENST00000330943 TRAV22A0A0B4J277 110 aa9.17□□□□□ -0.94
SNX20-202ENST00000330943 C11orf45Q8TAV5 145 aa9.17□□□□□ -0.94
SNX20-202ENST00000330943 A0A087WSZ3 146 aa9.15□□□□□ -0.94
SNX20-202ENST00000330943 PRR15Q8IV56 129 aa9.15□□□□□ -0.94
SNX20-202ENST00000330943 NDUFB1O75438 58 aa9.15□□□□□ -0.94
SNX20-202ENST00000330943 MP68P56378 58 aa9.15□□□□□ -0.95
SNX20-202ENST00000330943 RPL37AP61513 92 aaKnown RBP9.14□□□□□ -0.95
SNX20-202ENST00000330943 LINC00208Q96KT6 92 aa9.14□□□□□ -0.95
SNX20-202ENST00000330943 PRLHP81277 87 aa9.13□□□□□ -0.95
SNX20-202ENST00000330943 LINC00588Q9Y4M8 146 aa9.11□□□□□ -0.95
SNX20-202ENST00000330943 A8MUN3 132 aa9.11□□□□□ -0.95
SNX20-202ENST00000330943 B9D2Q9BPU9 175 aa9.1□□□□□ -0.95
SNX20-202ENST00000330943 H0Y9P7 68 aa9.08□□□□□ -0.96
SNX20-202ENST00000330943 IGKV2-24A0A0C4DH68 120 aa9.07□□□□□ -0.96
SNX20-202ENST00000330943 DNAH10Q8IVF4 4471 aa9.07□□□□□ -0.96
SNX20-202ENST00000330943 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
SNX20-202ENST00000330943 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
SNX20-202ENST00000330943 UBE2AP49459 152 aa9.05□□□□□ -0.96
SNX20-202ENST00000330943 IGLV8-61A0A075B6I0 122 aa9.05□□□□□ -0.96
SNX20-202ENST00000330943 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
SNX20-202ENST00000330943 SRRM2Q9UQ35 2752 aaKnown RBP9.04□□□□□ -0.96
SNX20-202ENST00000330943 A0A096LNI7 61 aa9.04□□□□□ -0.96
SNX20-202ENST00000330943 HUWE1Q7Z6Z7 4374 aaKnown RBP9.04□□□□□ -0.96
SNX20-202ENST00000330943 A8MU10 97 aa9.02□□□□□ -0.96
SNX20-202ENST00000330943 CNBPP62633 177 aaKnown RBP9.02□□□□□ -0.96
SNX20-202ENST00000330943 Q5VV11 94 aa9.02□□□□□ -0.96
SNX20-202ENST00000330943 SPANXA2-OT1Q8N9U9 137 aa9.01□□□□□ -0.97
SNX20-202ENST00000330943 DNAH1Q9P2D7 4330 aa9.01□□□□□ -0.97
SNX20-202ENST00000330943 H3BPC8 53 aa8.99□□□□□ -0.97
SNX20-202ENST00000330943 TGP01266 2768 aa8.98□□□□□ -0.97
SNX20-202ENST00000330943 A8MWP4 228 aa8.98□□□□□ -0.97
SNX20-202ENST00000330943 Q8N9P0 234 aaPredicted RBP8.98□□□□□ -0.97
SNX20-202ENST00000330943 C16orf90A8MZG2 172 aa8.98□□□□□ -0.97
SNX20-202ENST00000330943 DNAH7Q8WXX0 4024 aa8.98□□□□□ -0.97
SNX20-202ENST00000330943 DNAH3Q8TD57 4116 aa8.97□□□□□ -0.97
SNX20-202ENST00000330943 CHKB-CPT1BH3BT56 60 aa8.97□□□□□ -0.97
SNX20-202ENST00000330943 PRR15LQ9BU68 103 aa8.97□□□□□ -0.97
SNX20-202ENST00000330943 LINC00472Q9H8W2 130 aa8.96□□□□□ -0.97
SNX20-202ENST00000330943 H0Y9J4 135 aa8.95□□□□□ -0.98
SNX20-202ENST00000330943 KRTAP11-1Q8IUC1 163 aa8.95□□□□□ -0.98
SNX20-202ENST00000330943 C9orf163Q8N9P6 203 aa8.95□□□□□ -0.98
SNX20-202ENST00000330943 LIMD2Q9BT23 127 aa8.95□□□□□ -0.98
SNX20-202ENST00000330943 PHF5AQ7RTV0 110 aaKnown RBP8.94□□□□□ -0.98
SNX20-202ENST00000330943 CHTF8P0CG12 524 aa8.93□□□□□ -0.98
SNX20-202ENST00000330943 K7EIL1 84 aa8.92□□□□□ -0.98
SNX20-202ENST00000330943 DNAH9Q9NYC9 4486 aa8.92□□□□□ -0.98
SNX20-202ENST00000330943 COA5Q86WW8 74 aa8.91□□□□□ -0.98
SNX20-202ENST00000330943 MMP24-AS1A0A0U1RRL7 71 aa8.91□□□□□ -0.98
SNX20-202ENST00000330943 SPRR1BP22528 89 aa8.91□□□□□ -0.98
SNX20-202ENST00000330943 KRTAP1-5Q9BYS1 174 aa8.91□□□□□ -0.98
SNX20-202ENST00000330943 PCOTHQ58A44 107 aa8.88□□□□□ -0.99
SNX20-202ENST00000330943 MDFIQ99750 246 aa8.88□□□□□ -0.99
SNX20-202ENST00000330943 SPTSSBQ8NFR3 76 aa8.87□□□□□ -0.99
SNX20-202ENST00000330943 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
SNX20-202ENST00000330943 A6NED7 52 aa8.85□□□□□ -0.99
SNX20-202ENST00000330943 DNHD1Q96M86 4753 aa8.85□□□□□ -0.99
SNX20-202ENST00000330943 Q75L30 129 aa8.84□□□□□ -0.99
SNX20-202ENST00000330943 PRKDCP78527 4128 aaKnown RBP8.84□□□□□ -0.99
SNX20-202ENST00000330943 LCA10Q71F78 164 aa8.83□□□□□ -1
SNX20-202ENST00000330943 MEGF8Q7Z7M0 2845 aa8.83□□□□□ -1
SNX20-202ENST00000330943 PLECQ15149 4684 aaKnown RBP8.83□□□□□ -1
SNX20-202ENST00000330943 CD164Q04900 197 aa8.83□□□□□ -1
SNX20-202ENST00000330943 LOC101927531A0A1B0GV80 90 aa8.81□□□□□ -1
SNX20-202ENST00000330943 IGLV9-49A0A0B4J1Y8 123 aa8.81□□□□□ -1
SNX20-202ENST00000330943 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
SNX20-202ENST00000330943 Q96NJ1 140 aa8.79□□□□□ -1
SNX20-202ENST00000330943 NDUFS5O43920 106 aa8.78□□□□□ -1
SNX20-202ENST00000330943 TP53AIP1Q9HCN2 124 aa8.78□□□□□ -1
SNX20-202ENST00000330943 MOBPQ13875 183 aa8.77□□□□□ -1
SNX20-202ENST00000330943 ATP11AUNQ6ZP68 121 aa8.77□□□□□ -1
SNX20-202ENST00000330943 UBE2DNLQ8IWF7 75 aa8.77□□□□□ -1
SNX20-202ENST00000330943 C14orf177Q52M58 125 aa8.77□□□□□ -1.01
SNX20-202ENST00000330943 KTN1-AS1Q86SY8 53 aa8.77□□□□□ -1.01
SNX20-202ENST00000330943 C8orf17Q9NRJ1 99 aa8.77□□□□□ -1.01
SNX20-202ENST00000330943 ASB16-AS1Q495Z4 193 aa8.76□□□□□ -1.01
SNX20-202ENST00000330943 IGHV6-1A0A0B4J1U7 121 aa8.75□□□□□ -1.01
SNX20-202ENST00000330943 PANO1I0J062 215 aa8.75□□□□□ -1.01
SNX20-202ENST00000330943 Q6ZR54 194 aa8.74□□□□□ -1.01
SNX20-202ENST00000330943 KRTAP13-1Q8IUC0 172 aa8.74□□□□□ -1.01
SNX20-202ENST00000330943 STARD9Q9P2P6 4700 aa8.73□□□□□ -1.01
SNX20-202ENST00000330943 CDC42SE1Q9NRR8 79 aa8.73□□□□□ -1.01
SNX20-202ENST00000330943 LINC01558Q9Y6Z2 57 aa8.73□□□□□ -1.01
SNX20-202ENST00000330943 KMT2AQ03164 3969 aa8.72□□□□□ -1.01
SNX20-202ENST00000330943 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
SNX20-202ENST00000330943 HRES1P13985 223 aa8.7□□□□□ -1.02
SNX20-202ENST00000330943 A6NN06 94 aa8.7□□□□□ -1.02
SNX20-202ENST00000330943 PLAC8Q9NZF1 115 aa8.69□□□□□ -1.02
SNX20-202ENST00000330943 CDK2AP2O75956 126 aa8.69□□□□□ -1.02
SNX20-202ENST00000330943 MRPL34Q9BQ48 92 aaKnown RBP8.67□□□□□ -1.02
SNX20-202ENST00000330943 SPINK7P58062 85 aa8.67□□□□□ -1.02
SNX20-202ENST00000330943 A0A087X002 238 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms