RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 H3BPC8 53 aa9.13□□□□□ -0.95
EPHB3-201ENST00000330394 CELSR1Q9NYQ6 3014 aa9.13□□□□□ -0.95
EPHB3-201ENST00000330394 CASC10Q5T4H9 136 aa9.13□□□□□ -0.95
EPHB3-201ENST00000330394 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
EPHB3-201ENST00000330394 A8MWP4 228 aa9.12□□□□□ -0.95
EPHB3-201ENST00000330394 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
EPHB3-201ENST00000330394 HIVEP1P15822 2718 aa9.12□□□□□ -0.95
EPHB3-201ENST00000330394 A0A1B0GU69 56 aa9.11□□□□□ -0.95
EPHB3-201ENST00000330394 PRR15Q8IV56 129 aa9.11□□□□□ -0.95
EPHB3-201ENST00000330394 K7ERS5 55 aa9.1□□□□□ -0.95
EPHB3-201ENST00000330394 C16orf90A8MZG2 172 aa9.09□□□□□ -0.95
EPHB3-201ENST00000330394 DNAH10OSP0CZ25 163 aa9.09□□□□□ -0.95
EPHB3-201ENST00000330394 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
EPHB3-201ENST00000330394 LY6G6CO95867 125 aa9.08□□□□□ -0.96
EPHB3-201ENST00000330394 KRTAP1-3Q8IUG1 177 aa9.08□□□□□ -0.96
EPHB3-201ENST00000330394 DSCR10P59022 87 aa9.07□□□□□ -0.96
EPHB3-201ENST00000330394 LOC101927531A0A1B0GV80 90 aa9.07□□□□□ -0.96
EPHB3-201ENST00000330394 APCP25054 2843 aa9.06□□□□□ -0.96
EPHB3-201ENST00000330394 ATP11AUNQ6ZP68 121 aa9.06□□□□□ -0.96
EPHB3-201ENST00000330394 ACYP2P14621 99 aa9.06□□□□□ -0.96
EPHB3-201ENST00000330394 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
EPHB3-201ENST00000330394 STAB2Q8WWQ8 2551 aa9.04□□□□□ -0.96
EPHB3-201ENST00000330394 IGLV5-52A0A0A0MRZ9 124 aa9.04□□□□□ -0.96
EPHB3-201ENST00000330394 MXRA5Q9NR99 2828 aa9.04□□□□□ -0.96
EPHB3-201ENST00000330394 CD164Q04900 197 aa9.01□□□□□ -0.97
EPHB3-201ENST00000330394 ANAPC11Q9NYG5 84 aa9□□□□□ -0.97
EPHB3-201ENST00000330394 SPACA4Q8TDM5 124 aa8.99□□□□□ -0.97
EPHB3-201ENST00000330394 MRPL34Q9BQ48 92 aaKnown RBP8.99□□□□□ -0.97
EPHB3-201ENST00000330394 KRTAP1-1Q07627 177 aa8.98□□□□□ -0.97
EPHB3-201ENST00000330394 KRTAP10-11P60412 298 aa8.98□□□□□ -0.97
EPHB3-201ENST00000330394 C8orf17Q9NRJ1 99 aa8.98□□□□□ -0.97
EPHB3-201ENST00000330394 Q1T7F1 81 aa8.98□□□□□ -0.97
EPHB3-201ENST00000330394 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
EPHB3-201ENST00000330394 MDFIQ99750 246 aa8.98□□□□□ -0.97
EPHB3-201ENST00000330394 KTN1-AS1Q86SY8 53 aa8.97□□□□□ -0.97
EPHB3-201ENST00000330394 KRTAP24-1Q3LI83 254 aa8.97□□□□□ -0.97
EPHB3-201ENST00000330394 NUPR2A6NF83 97 aa8.95□□□□□ -0.98
EPHB3-201ENST00000330394 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
EPHB3-201ENST00000330394 PRR26Q8N8Z3 221 aa8.95□□□□□ -0.98
EPHB3-201ENST00000330394 SPENQ96T58 3664 aaKnown RBP8.95□□□□□ -0.98
EPHB3-201ENST00000330394 DMBT1Q9UGM3 2413 aaPredicted RBP8.94□□□□□ -0.98
EPHB3-201ENST00000330394 C8orf87E5RJ46 101 aa8.94□□□□□ -0.98
EPHB3-201ENST00000330394 SPRR4Q96PI1 79 aa8.94□□□□□ -0.98
EPHB3-201ENST00000330394 PLA2G2DQ9UNK4 145 aa8.92□□□□□ -0.98
EPHB3-201ENST00000330394 LINC00313P59037 77 aa8.91□□□□□ -0.98
EPHB3-201ENST00000330394 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.98
EPHB3-201ENST00000330394 NIPBLQ6KC79 2804 aaeCLIP8.9□□□□□ -0.99
EPHB3-201ENST00000330394 A0A1B0GVX0 72 aa8.89□□□□□ -0.99
EPHB3-201ENST00000330394 NBDYA0A0U1RRE5 68 aa8.89□□□□□ -0.99
EPHB3-201ENST00000330394 Q8N9P0 234 aaPredicted RBP8.88□□□□□ -0.99
EPHB3-201ENST00000330394 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
EPHB3-201ENST00000330394 RTL8CO15255 209 aa8.85□□□□□ -0.99
EPHB3-201ENST00000330394 CDC42SE1Q9NRR8 79 aa8.85□□□□□ -0.99
EPHB3-201ENST00000330394 UQCR11O14957 56 aa8.85□□□□□ -0.99
EPHB3-201ENST00000330394 CNBPP62633 177 aaKnown RBP8.83□□□□□ -1
EPHB3-201ENST00000330394 C9orf163Q8N9P6 203 aa8.83□□□□□ -1
EPHB3-201ENST00000330394 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
EPHB3-201ENST00000330394 Q5VV11 94 aa8.83□□□□□ -1
EPHB3-201ENST00000330394 FAM229AH3BQW9 127 aa8.82□□□□□ -1
EPHB3-201ENST00000330394 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
EPHB3-201ENST00000330394 IGLV5-37A0A075B6J1 123 aa8.81□□□□□ -1
EPHB3-201ENST00000330394 LCA10Q71F78 164 aa8.81□□□□□ -1
EPHB3-201ENST00000330394 K7EIL1 84 aa8.79□□□□□ -1
EPHB3-201ENST00000330394 IGLV7-46A0A075B6I9 117 aa8.78□□□□□ -1
EPHB3-201ENST00000330394 SPRR1AP35321 89 aa8.78□□□□□ -1
EPHB3-201ENST00000330394 Q96NJ1 140 aa8.77□□□□□ -1.01
EPHB3-201ENST00000330394 KMT2BQ9UMN6 2715 aaPredicted RBP8.76□□□□□ -1.01
EPHB3-201ENST00000330394 PRAC1Q96KF2 57 aa8.75□□□□□ -1.01
EPHB3-201ENST00000330394 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
EPHB3-201ENST00000330394 ZNF861PO60384 105 aa8.75□□□□□ -1.01
EPHB3-201ENST00000330394 FLG2Q5D862 2391 aaPredicted RBP8.74□□□□□ -1.01
EPHB3-201ENST00000330394 KRTAP26-1Q6PEX3 210 aa8.74□□□□□ -1.01
EPHB3-201ENST00000330394 MMP24-AS1A0A0U1RRL7 71 aa8.74□□□□□ -1.01
EPHB3-201ENST00000330394 Q75L30 129 aa8.73□□□□□ -1.01
EPHB3-201ENST00000330394 SPINK7P58062 85 aa8.71□□□□□ -1.01
EPHB3-201ENST00000330394 TNP2Q05952 138 aa8.7□□□□□ -1.02
EPHB3-201ENST00000330394 TYMSOSQ8TAI1 123 aa8.69□□□□□ -1.02
EPHB3-201ENST00000330394 SSBP3-AS1Q7Z2R9 100 aa8.68□□□□□ -1.02
EPHB3-201ENST00000330394 LINC00472Q9H8W2 130 aa8.68□□□□□ -1.02
EPHB3-201ENST00000330394 HRES1P13985 223 aa8.67□□□□□ -1.02
EPHB3-201ENST00000330394 A8MU10 97 aa8.67□□□□□ -1.02
EPHB3-201ENST00000330394 Q8N1X5 172 aa8.67□□□□□ -1.02
EPHB3-201ENST00000330394 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
EPHB3-201ENST00000330394 A0A087WTM6 91 aa8.66□□□□□ -1.02
EPHB3-201ENST00000330394 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.65□□□□□ -1.02
EPHB3-201ENST00000330394 PLA2G1BP04054 148 aaKnown RBP8.64□□□□□ -1.03
EPHB3-201ENST00000330394 ZCCHC13Q8WW36 166 aaKnown RBP8.64□□□□□ -1.03
EPHB3-201ENST00000330394 CSMD2Q7Z408 3487 aa8.62□□□□□ -1.03
EPHB3-201ENST00000330394 KRTAP4-16G5E9R7 235 aaPredicted RBP8.62□□□□□ -1.03
EPHB3-201ENST00000330394 KRTAP1-5Q9BYS1 174 aa8.6□□□□□ -1.03
EPHB3-201ENST00000330394 SPINT4Q6UDR6 99 aa8.59□□□□□ -1.03
EPHB3-201ENST00000330394 APLNQ9ULZ1 77 aa8.59□□□□□ -1.03
EPHB3-201ENST00000330394 IGLV7-43P04211 117 aa8.59□□□□□ -1.03
EPHB3-201ENST00000330394 VWFP04275 2813 aa8.59□□□□□ -1.03
EPHB3-201ENST00000330394 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
EPHB3-201ENST00000330394 C9orf92A6NGG3 77 aa8.56□□□□□ -1.04
EPHB3-201ENST00000330394 PDZD2O15018 2839 aa8.56□□□□□ -1.04
EPHB3-201ENST00000330394 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
EPHB3-201ENST00000330394 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
EPHB3-201ENST00000330394 TENM3Q9P273 2699 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms