RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 FAM236BA0A1B0GV22 79 aa9.17□□□□□ -0.94
TPM3-205ENST00000328159 HYDINQ4G0P3 5121 aa9.16□□□□□ -0.94
TPM3-205ENST00000328159 IGLV8-61A0A075B6I0 122 aa9.16□□□□□ -0.94
TPM3-205ENST00000328159 HAMPP81172 84 aa9.16□□□□□ -0.94
TPM3-205ENST00000328159 Q8NBF4 154 aa9.16□□□□□ -0.94
TPM3-205ENST00000328159 ANAPC13Q9BS18 74 aa9.16□□□□□ -0.94
TPM3-205ENST00000328159 DNAH5Q8TE73 4624 aa9.15□□□□□ -0.94
TPM3-205ENST00000328159 A0A1B0GW54 56 aa9.15□□□□□ -0.94
TPM3-205ENST00000328159 FAM30AQ9NZY2 134 aa9.14□□□□□ -0.95
TPM3-205ENST00000328159 DNAH8Q96JB1 4490 aa9.14□□□□□ -0.95
TPM3-205ENST00000328159 HIST1H4AP62805 103 aaKnown RBP9.13□□□□□ -0.95
TPM3-205ENST00000328159 IGFL1Q6UW32 110 aa9.13□□□□□ -0.95
TPM3-205ENST00000328159 A0A087WVE0 104 aa9.12□□□□□ -0.95
TPM3-205ENST00000328159 CXCL6P80162 114 aa9.12□□□□□ -0.95
TPM3-205ENST00000328159 SPRR4Q96PI1 79 aa9.12□□□□□ -0.95
TPM3-205ENST00000328159 NREPQ16612 68 aa9.12□□□□□ -0.95
TPM3-205ENST00000328159 FAT2Q9NYQ8 4349 aa9.11□□□□□ -0.95
TPM3-205ENST00000328159 KRTAP10-1P60331 282 aa9.11□□□□□ -0.95
TPM3-205ENST00000328159 CIRBP-AS1Q8TBR5 109 aa9.11□□□□□ -0.95
TPM3-205ENST00000328159 A0A0G2JQZ4 141 aa9.1□□□□□ -0.95
TPM3-205ENST00000328159 LCE6AA0A183 80 aa9.1□□□□□ -0.95
TPM3-205ENST00000328159 ZNF861PO60384 105 aa9.09□□□□□ -0.95
TPM3-205ENST00000328159 CRYGAP11844 174 aa9.09□□□□□ -0.95
TPM3-205ENST00000328159 Q6ZSA8 131 aa9.09□□□□□ -0.95
TPM3-205ENST00000328159 SCXQ7RTU7 201 aa9.09□□□□□ -0.95
TPM3-205ENST00000328159 SACSQ9NZJ4 4579 aa9.08□□□□□ -0.96
TPM3-205ENST00000328159 PKD1P98161 4303 aa9.08□□□□□ -0.96
TPM3-205ENST00000328159 ZNF706Q9Y5V0 76 aaPredicted RBP9.08□□□□□ -0.96
TPM3-205ENST00000328159 SRRM2Q9UQ35 2752 aaKnown RBP9.08□□□□□ -0.96
TPM3-205ENST00000328159 LINC00483Q53H64 154 aa9.07□□□□□ -0.96
TPM3-205ENST00000328159 IGLV7-43P04211 117 aa9.06□□□□□ -0.96
TPM3-205ENST00000328159 ATOX1O00244 68 aa9.04□□□□□ -0.96
TPM3-205ENST00000328159 BPY2O14599 106 aa9.04□□□□□ -0.96
TPM3-205ENST00000328159 KRTAP3-3Q9BYR6 98 aa9.04□□□□□ -0.96
TPM3-205ENST00000328159 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
TPM3-205ENST00000328159 LINC00336Q6ZUF6 198 aa9.02□□□□□ -0.97
TPM3-205ENST00000328159 IGLV9-49A0A0B4J1Y8 123 aa9.01□□□□□ -0.97
TPM3-205ENST00000328159 A0A087WSZ3 146 aa9□□□□□ -0.97
TPM3-205ENST00000328159 C9orf153Q5TBE3 101 aa9□□□□□ -0.97
TPM3-205ENST00000328159 Q8N9L7 120 aa8.99□□□□□ -0.97
TPM3-205ENST00000328159 CCDC179H3BU77 68 aa8.98□□□□□ -0.97
TPM3-205ENST00000328159 IGKV4-1P06312 121 aa8.98□□□□□ -0.97
TPM3-205ENST00000328159 RPL37AP61513 92 aaKnown RBP8.97□□□□□ -0.97
TPM3-205ENST00000328159 ANAPC11Q9NYG5 84 aa8.97□□□□□ -0.97
TPM3-205ENST00000328159 MOBPQ13875 183 aa8.94□□□□□ -0.98
TPM3-205ENST00000328159 DSCR10P59022 87 aa8.94□□□□□ -0.98
TPM3-205ENST00000328159 COX7CP15954 63 aa8.93□□□□□ -0.98
TPM3-205ENST00000328159 SERP2Q8N6R1 65 aa8.93□□□□□ -0.98
TPM3-205ENST00000328159 A0A1B0GVY2 172 aa8.92□□□□□ -0.98
TPM3-205ENST00000328159 UQCRQO14949 82 aa8.91□□□□□ -0.98
TPM3-205ENST00000328159 LRP1BQ9NZR2 4599 aa8.91□□□□□ -0.98
TPM3-205ENST00000328159 RYR2Q92736 4967 aa8.9□□□□□ -0.98
TPM3-205ENST00000328159 DEFB116Q30KQ4 102 aa8.9□□□□□ -0.98
TPM3-205ENST00000328159 K7EQZ3 153 aa8.89□□□□□ -0.99
TPM3-205ENST00000328159 LINC00472Q9H8W2 130 aa8.88□□□□□ -0.99
TPM3-205ENST00000328159 HRCT1Q6UXD1 115 aa8.87□□□□□ -0.99
TPM3-205ENST00000328159 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
TPM3-205ENST00000328159 TRAV7A0A075B6U4 112 aa8.85□□□□□ -0.99
TPM3-205ENST00000328159 DYNC1H1Q14204 4646 aaKnown RBP8.85□□□□□ -0.99
TPM3-205ENST00000328159 SS18L2Q9UHA2 77 aa8.84□□□□□ -1
TPM3-205ENST00000328159 PKHD1P08F94 4074 aa8.83□□□□□ -1
TPM3-205ENST00000328159 SSBP3-AS1Q7Z2R9 100 aa8.83□□□□□ -1
TPM3-205ENST00000328159 J3KT08 172 aa8.81□□□□□ -1
TPM3-205ENST00000328159 FAM229BQ4G0N7 80 aa8.81□□□□□ -1
TPM3-205ENST00000328159 Q96NJ1 140 aa8.81□□□□□ -1
TPM3-205ENST00000328159 A8MWP4 228 aa8.8□□□□□ -1
TPM3-205ENST00000328159 A0A087X002 238 aa8.79□□□□□ -1
TPM3-205ENST00000328159 HCG22E2RYF7 251 aa8.79□□□□□ -1
TPM3-205ENST00000328159 CD164Q04900 197 aa8.79□□□□□ -1
TPM3-205ENST00000328159 KRTAP1-4P0C5Y4 121 aa8.78□□□□□ -1
TPM3-205ENST00000328159 KMT2CQ8NEZ4 4911 aaKnown RBP8.78□□□□□ -1
TPM3-205ENST00000328159 KRTAP13-2Q52LG2 175 aa8.78□□□□□ -1
TPM3-205ENST00000328159 PRR15Q8IV56 129 aa8.78□□□□□ -1
TPM3-205ENST00000328159 OCR1Q9BZK8 76 aa8.77□□□□□ -1.01
TPM3-205ENST00000328159 VPS13BQ7Z7G8 4022 aa8.77□□□□□ -1.01
TPM3-205ENST00000328159 SMR3BP02814 79 aaPredicted RBP8.76□□□□□ -1.01
TPM3-205ENST00000328159 SPINK6Q6UWN8 80 aa8.74□□□□□ -1.01
TPM3-205ENST00000328159 WFDC13Q8IUB5 93 aa8.74□□□□□ -1.01
TPM3-205ENST00000328159 NDUFB1O75438 58 aa8.73□□□□□ -1.01
TPM3-205ENST00000328159 C20orf197Q8N268 126 aa8.73□□□□□ -1.01
TPM3-205ENST00000328159 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
TPM3-205ENST00000328159 CYSTM1Q9H1C7 97 aa8.73□□□□□ -1.01
TPM3-205ENST00000328159 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.01
TPM3-205ENST00000328159 KRTAP29-1A8MX34 341 aaPredicted RBP8.71□□□□□ -1.02
TPM3-205ENST00000328159 CASC2Q6XLA1 102 aa8.7□□□□□ -1.02
TPM3-205ENST00000328159 CDK2AP2O75956 126 aa8.68□□□□□ -1.02
TPM3-205ENST00000328159 MMP24-AS1A0A0U1RRL7 71 aa8.68□□□□□ -1.02
TPM3-205ENST00000328159 ASB16-AS1Q495Z4 193 aa8.68□□□□□ -1.02
TPM3-205ENST00000328159 KLKP1Q107X0 134 aa8.67□□□□□ -1.02
TPM3-205ENST00000328159 A0A1B0GVX0 72 aa8.66□□□□□ -1.02
TPM3-205ENST00000328159 KRTAP10-4P60372 401 aaPredicted RBP8.66□□□□□ -1.02
TPM3-205ENST00000328159 TMEM254Q8TBM7 123 aa8.66□□□□□ -1.02
TPM3-205ENST00000328159 SNURFQ9Y675 71 aa8.66□□□□□ -1.02
TPM3-205ENST00000328159 Q5XG85 94 aa8.65□□□□□ -1.02
TPM3-205ENST00000328159 TYMSOSQ8TAI1 123 aa8.65□□□□□ -1.02
TPM3-205ENST00000328159 IGHV6-1A0A0B4J1U7 121 aa8.64□□□□□ -1.03
TPM3-205ENST00000328159 C8orf17Q9NRJ1 99 aa8.64□□□□□ -1.03
TPM3-205ENST00000328159 hDV103S1A0JD37 113 aa8.63□□□□□ -1.03
TPM3-205ENST00000328159 A0A0U1RQV1 116 aa8.61□□□□□ -1.03
TPM3-205ENST00000328159 TMEM258P61165 79 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms