RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 C9orf163Q8N9P6 203 aa8.87□□□□□ -0.99
DNMT3B-202ENST00000328111 SMG1Q96Q15 3661 aaKnown RBP8.86□□□□□ -0.99
DNMT3B-202ENST00000328111 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
DNMT3B-202ENST00000328111 H7BZZ5 65 aa8.85□□□□□ -0.99
DNMT3B-202ENST00000328111 PMAIP1Q13794 54 aa8.84□□□□□ -0.99
DNMT3B-202ENST00000328111 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
DNMT3B-202ENST00000328111 IGLV5-48A0A075B6I7 105 aa8.83□□□□□ -1
DNMT3B-202ENST00000328111 A8MWP4 228 aa8.81□□□□□ -1
DNMT3B-202ENST00000328111 TP53AIP1Q9HCN2 124 aa8.81□□□□□ -1
DNMT3B-202ENST00000328111 SPACA4Q8TDM5 124 aa8.8□□□□□ -1
DNMT3B-202ENST00000328111 APLNQ9ULZ1 77 aa8.8□□□□□ -1
DNMT3B-202ENST00000328111 CSMD1Q96PZ7 3565 aa8.8□□□□□ -1
DNMT3B-202ENST00000328111 CELSR1Q9NYQ6 3014 aa8.79□□□□□ -1
DNMT3B-202ENST00000328111 CNBPP62633 177 aaKnown RBP8.79□□□□□ -1
DNMT3B-202ENST00000328111 TENM4Q6N022 2769 aa8.78□□□□□ -1
DNMT3B-202ENST00000328111 ANAPC11Q9NYG5 84 aa8.78□□□□□ -1
DNMT3B-202ENST00000328111 PRR15Q8IV56 129 aa8.78□□□□□ -1
DNMT3B-202ENST00000328111 IGLV5-37A0A075B6J1 123 aa8.78□□□□□ -1
DNMT3B-202ENST00000328111 A0A087WTM6 91 aa8.78□□□□□ -1
DNMT3B-202ENST00000328111 IGKV2D-30A0A075B6S6 120 aa8.76□□□□□ -1.01
DNMT3B-202ENST00000328111 IGKV2-30P06310 120 aa8.76□□□□□ -1.01
DNMT3B-202ENST00000328111 H3BPC8 53 aa8.75□□□□□ -1.01
DNMT3B-202ENST00000328111 PRO0628Q9UI54 55 aa8.75□□□□□ -1.01
DNMT3B-202ENST00000328111 SPINK1P00995 79 aa8.73□□□□□ -1.01
DNMT3B-202ENST00000328111 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
DNMT3B-202ENST00000328111 LIMD2Q9BT23 127 aa8.73□□□□□ -1.01
DNMT3B-202ENST00000328111 ZNF861PO60384 105 aa8.72□□□□□ -1.01
DNMT3B-202ENST00000328111 CYSTM1Q9H1C7 97 aa8.72□□□□□ -1.01
DNMT3B-202ENST00000328111 PSORS1C2Q9UIG4 136 aa8.71□□□□□ -1.02
DNMT3B-202ENST00000328111 SPAG11AQ6PDA7 123 aa8.71□□□□□ -1.02
DNMT3B-202ENST00000328111 OCR1Q9BZK8 76 aa8.69□□□□□ -1.02
DNMT3B-202ENST00000328111 SVEP1Q4LDE5 3571 aa8.69□□□□□ -1.02
DNMT3B-202ENST00000328111 MRPL34Q9BQ48 92 aaKnown RBP8.68□□□□□ -1.02
DNMT3B-202ENST00000328111 DSCR10P59022 87 aa8.68□□□□□ -1.02
DNMT3B-202ENST00000328111 LINC00313P59037 77 aa8.68□□□□□ -1.02
DNMT3B-202ENST00000328111 SPRR4Q96PI1 79 aa8.68□□□□□ -1.02
DNMT3B-202ENST00000328111 C8orf17Q9NRJ1 99 aa8.68□□□□□ -1.02
DNMT3B-202ENST00000328111 SPRR1AP35321 89 aa8.67□□□□□ -1.02
DNMT3B-202ENST00000328111 WWC2-AS2Q96NR7 200 aa8.66□□□□□ -1.02
DNMT3B-202ENST00000328111 KRTAP1-5Q9BYS1 174 aa8.66□□□□□ -1.02
DNMT3B-202ENST00000328111 TYMSOSQ8TAI1 123 aa8.65□□□□□ -1.02
DNMT3B-202ENST00000328111 LINC00336Q6ZUF6 198 aa8.64□□□□□ -1.03
DNMT3B-202ENST00000328111 A8MUN3 132 aa8.64□□□□□ -1.03
DNMT3B-202ENST00000328111 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.64□□□□□ -1.03
DNMT3B-202ENST00000328111 A0A1B0GVX0 72 aa8.63□□□□□ -1.03
DNMT3B-202ENST00000328111 PLA2G1BP04054 148 aaKnown RBP8.62□□□□□ -1.03
DNMT3B-202ENST00000328111 ACYP2P14621 99 aa8.62□□□□□ -1.03
DNMT3B-202ENST00000328111 CUBNO60494 3623 aa8.61□□□□□ -1.03
DNMT3B-202ENST00000328111 COA5Q86WW8 74 aa8.6□□□□□ -1.03
DNMT3B-202ENST00000328111 SSBP3-AS1Q7Z2R9 100 aa8.6□□□□□ -1.03
DNMT3B-202ENST00000328111 LOC101927531A0A1B0GV80 90 aa8.59□□□□□ -1.03
DNMT3B-202ENST00000328111 IGLV7-43P04211 117 aa8.59□□□□□ -1.03
DNMT3B-202ENST00000328111 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
DNMT3B-202ENST00000328111 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
DNMT3B-202ENST00000328111 C8orf87E5RJ46 101 aa8.56□□□□□ -1.04
DNMT3B-202ENST00000328111 K7ERS5 55 aa8.56□□□□□ -1.04
DNMT3B-202ENST00000328111 Q96NJ1 140 aa8.56□□□□□ -1.04
DNMT3B-202ENST00000328111 A0A1B0GU69 56 aa8.55□□□□□ -1.04
DNMT3B-202ENST00000328111 TNP2Q05952 138 aa8.55□□□□□ -1.04
DNMT3B-202ENST00000328111 TENM1Q9UKZ4 2725 aa8.53□□□□□ -1.04
DNMT3B-202ENST00000328111 TENM3Q9P273 2699 aa8.51□□□□□ -1.05
DNMT3B-202ENST00000328111 SMR3BP02814 79 aaPredicted RBP8.5□□□□□ -1.05
DNMT3B-202ENST00000328111 KRTAP4-16G5E9R7 235 aaPredicted RBP8.49□□□□□ -1.05
DNMT3B-202ENST00000328111 VWFP04275 2813 aa8.49□□□□□ -1.05
DNMT3B-202ENST00000328111 ZFHX3Q15911 3703 aa8.47□□□□□ -1.05
DNMT3B-202ENST00000328111 IGLV8-61A0A075B6I0 122 aa8.47□□□□□ -1.05
DNMT3B-202ENST00000328111 SPENQ96T58 3664 aaKnown RBP8.46□□□□□ -1.06
DNMT3B-202ENST00000328111 OXTP01178 125 aa8.45□□□□□ -1.06
DNMT3B-202ENST00000328111 Q5XG85 94 aa8.45□□□□□ -1.06
DNMT3B-202ENST00000328111 SPANXA2-OT1Q8N9U9 137 aa8.45□□□□□ -1.06
DNMT3B-202ENST00000328111 SPRR1BP22528 89 aa8.44□□□□□ -1.06
DNMT3B-202ENST00000328111 FBN1P35555 2871 aaKnown RBP8.44□□□□□ -1.06
DNMT3B-202ENST00000328111 LINC00472Q9H8W2 130 aa8.43□□□□□ -1.06
DNMT3B-202ENST00000328111 PANO1I0J062 215 aa8.43□□□□□ -1.06
DNMT3B-202ENST00000328111 MMP24-AS1A0A0U1RRL7 71 aa8.42□□□□□ -1.06
DNMT3B-202ENST00000328111 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
DNMT3B-202ENST00000328111 CYP4F30PQ9H0H9 118 aa8.41□□□□□ -1.06
DNMT3B-202ENST00000328111 FAM229BQ4G0N7 80 aa8.41□□□□□ -1.06
DNMT3B-202ENST00000328111 OTOGQ6ZRI0 2925 aa8.41□□□□□ -1.06
DNMT3B-202ENST00000328111 FP248Q71RG6 208 aaPredicted RBP8.41□□□□□ -1.06
DNMT3B-202ENST00000328111 PLAC8Q9NZF1 115 aa8.4□□□□□ -1.06
DNMT3B-202ENST00000328111 ATP11AUNQ6ZP68 121 aa8.39□□□□□ -1.07
DNMT3B-202ENST00000328111 DMBT1Q9UGM3 2413 aaPredicted RBP8.38□□□□□ -1.07
DNMT3B-202ENST00000328111 KRTAP7-1Q8IUC3 87 aa8.38□□□□□ -1.07
DNMT3B-202ENST00000328111 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
DNMT3B-202ENST00000328111 C9orf92A6NGG3 77 aa8.38□□□□□ -1.07
DNMT3B-202ENST00000328111 PDZD2O15018 2839 aa8.37□□□□□ -1.07
DNMT3B-202ENST00000328111 PKD1L1Q8TDX9 2849 aa8.34□□□□□ -1.07
DNMT3B-202ENST00000328111 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
DNMT3B-202ENST00000328111 CSMD2Q7Z408 3487 aa8.34□□□□□ -1.07
DNMT3B-202ENST00000328111 KRTAP11-1Q8IUC1 163 aa8.33□□□□□ -1.08
DNMT3B-202ENST00000328111 IGLV7-46A0A075B6I9 117 aa8.33□□□□□ -1.08
DNMT3B-202ENST00000328111 Q1T7F1 81 aa8.32□□□□□ -1.08
DNMT3B-202ENST00000328111 CD164Q04900 197 aa8.32□□□□□ -1.08
DNMT3B-202ENST00000328111 NBPF19A0A087WUL8 3843 aa8.31□□□□□ -1.08
DNMT3B-202ENST00000328111 UQCR11O14957 56 aa8.29□□□□□ -1.08
DNMT3B-202ENST00000328111 Q8N1X5 172 aa8.28□□□□□ -1.08
DNMT3B-202ENST00000328111 Q8N9P0 234 aaPredicted RBP8.28□□□□□ -1.08
DNMT3B-202ENST00000328111 BSNQ9UPA5 3926 aa8.27□□□□□ -1.09
DNMT3B-202ENST00000328111 HRES1P13985 223 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms