RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 REG3GQ6UW15 175 aa9.09□□□□□ -0.95
CHRNA3-201ENST00000326828 SPRR4Q96PI1 79 aa9.09□□□□□ -0.95
CHRNA3-201ENST00000326828 TENM2Q9NT68 2774 aa9.09□□□□□ -0.95
CHRNA3-201ENST00000326828 ZCCHC13Q8WW36 166 aaKnown RBP9.09□□□□□ -0.96
CHRNA3-201ENST00000326828 KMT2BQ9UMN6 2715 aaPredicted RBP9.08□□□□□ -0.96
CHRNA3-201ENST00000326828 MGAM2Q2M2H8 2515 aa9.07□□□□□ -0.96
CHRNA3-201ENST00000326828 LCE6AA0A183 80 aa9.05□□□□□ -0.96
CHRNA3-201ENST00000326828 Q1T7F1 81 aa9.05□□□□□ -0.96
CHRNA3-201ENST00000326828 SPRR1AP35321 89 aa9.05□□□□□ -0.96
CHRNA3-201ENST00000326828 LINC00588Q9Y4M8 146 aa9.05□□□□□ -0.96
CHRNA3-201ENST00000326828 H3BNG1 76 aa9.04□□□□□ -0.96
CHRNA3-201ENST00000326828 H0Y9P7 68 aa9.03□□□□□ -0.96
CHRNA3-201ENST00000326828 UBE2AP49459 152 aa9.03□□□□□ -0.96
CHRNA3-201ENST00000326828 B9D2Q9BPU9 175 aa9.03□□□□□ -0.96
CHRNA3-201ENST00000326828 SPTSSBQ8NFR3 76 aa9.03□□□□□ -0.96
CHRNA3-201ENST00000326828 CHKB-CPT1BH3BT56 60 aa9.03□□□□□ -0.96
CHRNA3-201ENST00000326828 PMAIP1Q13794 54 aa9.03□□□□□ -0.96
CHRNA3-201ENST00000326828 F8WDY8 70 aa9.02□□□□□ -0.97
CHRNA3-201ENST00000326828 H0Y9J4 135 aa9.02□□□□□ -0.97
CHRNA3-201ENST00000326828 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
CHRNA3-201ENST00000326828 DNAH10OSP0CZ25 163 aa9.01□□□□□ -0.97
CHRNA3-201ENST00000326828 PRR15LQ9BU68 103 aa9□□□□□ -0.97
CHRNA3-201ENST00000326828 STAB2Q8WWQ8 2551 aa9□□□□□ -0.97
CHRNA3-201ENST00000326828 A0A1B0GW54 56 aa9□□□□□ -0.97
CHRNA3-201ENST00000326828 TLX1NBP0CAT3 122 aa9□□□□□ -0.97
CHRNA3-201ENST00000326828 PRR15Q8IV56 129 aa9□□□□□ -0.97
CHRNA3-201ENST00000326828 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
CHRNA3-201ENST00000326828 PCOTHQ58A44 107 aa8.99□□□□□ -0.97
CHRNA3-201ENST00000326828 NDUFB1O75438 58 aa8.99□□□□□ -0.97
CHRNA3-201ENST00000326828 PLA2G2DQ9UNK4 145 aa8.97□□□□□ -0.97
CHRNA3-201ENST00000326828 CYP4F30PQ9H0H9 118 aa8.97□□□□□ -0.97
CHRNA3-201ENST00000326828 Q5VV11 94 aa8.95□□□□□ -0.98
CHRNA3-201ENST00000326828 PHF5AQ7RTV0 110 aaKnown RBP8.95□□□□□ -0.98
CHRNA3-201ENST00000326828 DNAH10Q8IVF4 4471 aa8.95□□□□□ -0.98
CHRNA3-201ENST00000326828 IGLV5-37A0A075B6J1 123 aa8.95□□□□□ -0.98
CHRNA3-201ENST00000326828 CNBPP62633 177 aaKnown RBP8.93□□□□□ -0.98
CHRNA3-201ENST00000326828 KRTAP11-1Q8IUC1 163 aa8.93□□□□□ -0.98
CHRNA3-201ENST00000326828 LYSTQ99698 3801 aa8.93□□□□□ -0.98
CHRNA3-201ENST00000326828 A6NED7 52 aa8.9□□□□□ -0.98
CHRNA3-201ENST00000326828 Q8N9P0 234 aaPredicted RBP8.9□□□□□ -0.98
CHRNA3-201ENST00000326828 NDUFS5O43920 106 aa8.9□□□□□ -0.99
CHRNA3-201ENST00000326828 KRTAP29-1A8MX34 341 aaPredicted RBP8.89□□□□□ -0.99
CHRNA3-201ENST00000326828 IGLV9-49A0A0B4J1Y8 123 aa8.88□□□□□ -0.99
CHRNA3-201ENST00000326828 C16orf90A8MZG2 172 aa8.86□□□□□ -0.99
CHRNA3-201ENST00000326828 SPAG11AQ6PDA7 123 aa8.86□□□□□ -0.99
CHRNA3-201ENST00000326828 COA5Q86WW8 74 aa8.86□□□□□ -0.99
CHRNA3-201ENST00000326828 KRTAP1-5Q9BYS1 174 aa8.86□□□□□ -0.99
CHRNA3-201ENST00000326828 A8MWP4 228 aa8.86□□□□□ -0.99
CHRNA3-201ENST00000326828 LIMD2Q9BT23 127 aa8.82□□□□□ -1
CHRNA3-201ENST00000326828 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
CHRNA3-201ENST00000326828 UBE2DNLQ8IWF7 75 aa8.81□□□□□ -1
CHRNA3-201ENST00000326828 LCA10Q71F78 164 aa8.8□□□□□ -1
CHRNA3-201ENST00000326828 IGHV6-1A0A0B4J1U7 121 aa8.8□□□□□ -1
CHRNA3-201ENST00000326828 MMP24-AS1A0A0U1RRL7 71 aa8.79□□□□□ -1
CHRNA3-201ENST00000326828 SPANXA2-OT1Q8N9U9 137 aa8.79□□□□□ -1
CHRNA3-201ENST00000326828 IGLV8-61A0A075B6I0 122 aa8.78□□□□□ -1
CHRNA3-201ENST00000326828 C9orf163Q8N9P6 203 aa8.78□□□□□ -1
CHRNA3-201ENST00000326828 CD164Q04900 197 aa8.77□□□□□ -1.01
CHRNA3-201ENST00000326828 ANAPC11Q9NYG5 84 aa8.77□□□□□ -1.01
CHRNA3-201ENST00000326828 KRTAP24-1Q3LI83 254 aa8.76□□□□□ -1.01
CHRNA3-201ENST00000326828 PANO1I0J062 215 aa8.75□□□□□ -1.01
CHRNA3-201ENST00000326828 H3BPC8 53 aa8.74□□□□□ -1.01
CHRNA3-201ENST00000326828 SPINK6Q6UWN8 80 aa8.73□□□□□ -1.01
CHRNA3-201ENST00000326828 IGLV7-46A0A075B6I9 117 aa8.72□□□□□ -1.01
CHRNA3-201ENST00000326828 DNAH9Q9NYC9 4486 aa8.71□□□□□ -1.02
CHRNA3-201ENST00000326828 K7EIL1 84 aa8.71□□□□□ -1.02
CHRNA3-201ENST00000326828 DNAH1Q9P2D7 4330 aa8.7□□□□□ -1.02
CHRNA3-201ENST00000326828 CDK2AP2O75956 126 aa8.69□□□□□ -1.02
CHRNA3-201ENST00000326828 A0A087X002 238 aa8.69□□□□□ -1.02
CHRNA3-201ENST00000326828 LOC101927531A0A1B0GV80 90 aa8.69□□□□□ -1.02
CHRNA3-201ENST00000326828 NOTCH2NLQ7Z3S9 236 aa8.69□□□□□ -1.02
CHRNA3-201ENST00000326828 SPINK7P58062 85 aa8.69□□□□□ -1.02
CHRNA3-201ENST00000326828 Q75L30 129 aa8.69□□□□□ -1.02
CHRNA3-201ENST00000326828 KTN1-AS1Q86SY8 53 aa8.68□□□□□ -1.02
CHRNA3-201ENST00000326828 C8orf17Q9NRJ1 99 aa8.68□□□□□ -1.02
CHRNA3-201ENST00000326828 RBM12B-AS1Q9P1G2 102 aa8.67□□□□□ -1.02
CHRNA3-201ENST00000326828 MOBPQ13875 183 aa8.67□□□□□ -1.02
CHRNA3-201ENST00000326828 PRR26Q8N8Z3 221 aa8.67□□□□□ -1.02
CHRNA3-201ENST00000326828 ATP11AUNQ6ZP68 121 aa8.66□□□□□ -1.02
CHRNA3-201ENST00000326828 HRES1P13985 223 aa8.65□□□□□ -1.02
CHRNA3-201ENST00000326828 SPRR1BP22528 89 aa8.65□□□□□ -1.03
CHRNA3-201ENST00000326828 CMYA5Q8N3K9 4069 aa8.65□□□□□ -1.03
CHRNA3-201ENST00000326828 HUWE1Q7Z6Z7 4374 aaKnown RBP8.64□□□□□ -1.03
CHRNA3-201ENST00000326828 RETNLBQ9BQ08 111 aa8.64□□□□□ -1.03
CHRNA3-201ENST00000326828 Q96NJ1 140 aa8.63□□□□□ -1.03
CHRNA3-201ENST00000326828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.62□□□□□ -1.03
CHRNA3-201ENST00000326828 CDC42SE1Q9NRR8 79 aa8.61□□□□□ -1.03
CHRNA3-201ENST00000326828 DNAH7Q8WXX0 4024 aa8.6□□□□□ -1.03
CHRNA3-201ENST00000326828 TP53AIP1Q9HCN2 124 aa8.6□□□□□ -1.03
CHRNA3-201ENST00000326828 A0A1B0GVX0 72 aa8.59□□□□□ -1.03
CHRNA3-201ENST00000326828 A6NN06 94 aa8.59□□□□□ -1.03
CHRNA3-201ENST00000326828 C14orf177Q52M58 125 aa8.59□□□□□ -1.03
CHRNA3-201ENST00000326828 MRPL34Q9BQ48 92 aaKnown RBP8.58□□□□□ -1.04
CHRNA3-201ENST00000326828 LINC01558Q9Y6Z2 57 aa8.58□□□□□ -1.04
CHRNA3-201ENST00000326828 TGP01266 2768 aa8.56□□□□□ -1.04
CHRNA3-201ENST00000326828 Q5W150 140 aa8.56□□□□□ -1.04
CHRNA3-201ENST00000326828 Q6ZR54 194 aa8.54□□□□□ -1.04
CHRNA3-201ENST00000326828 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
CHRNA3-201ENST00000326828 FRAS1Q86XX4 4008 aa8.53□□□□□ -1.04
CHRNA3-201ENST00000326828 KRTAP13-1Q8IUC0 172 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms