RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
LIN28A-202ENST00000326279 IGHV6-1A0A0B4J1U7 121 aa8.31□□□□□ -1.08
LIN28A-202ENST00000326279 TRBV7-4A0A0J9YYF1 115 aa8.26□□□□□ -1.09
LIN28A-202ENST00000326279 PLA2G2DQ9UNK4 145 aa8.26□□□□□ -1.09
LIN28A-202ENST00000326279 IGFL1Q6UW32 110 aa8.26□□□□□ -1.09
LIN28A-202ENST00000326279 KRTAP21-3Q3LHN1 58 aa8.26□□□□□ -1.09
LIN28A-202ENST00000326279 SMIM29Q86T20 159 aa8.26□□□□□ -1.09
LIN28A-202ENST00000326279 TRAV7A0A075B6U4 112 aa8.25□□□□□ -1.09
LIN28A-202ENST00000326279 CXCL6P80162 114 aa8.25□□□□□ -1.09
LIN28A-202ENST00000326279 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
LIN28A-202ENST00000326279 PLA2G1BP04054 148 aaKnown RBP8.24□□□□□ -1.09
LIN28A-202ENST00000326279 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
LIN28A-202ENST00000326279 A0A1W2PNM2 257 aa8.24□□□□□ -1.09
LIN28A-202ENST00000326279 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
LIN28A-202ENST00000326279 LINC00208Q96KT6 92 aa8.24□□□□□ -1.09
LIN28A-202ENST00000326279 CASC2Q6XLA1 102 aa8.23□□□□□ -1.09
LIN28A-202ENST00000326279 CSMD3Q7Z407 3707 aa8.23□□□□□ -1.09
LIN28A-202ENST00000326279 LCE6AA0A183 80 aa8.23□□□□□ -1.09
LIN28A-202ENST00000326279 KRTAP10-1P60331 282 aa8.23□□□□□ -1.09
LIN28A-202ENST00000326279 Q6ZR54 194 aa8.21□□□□□ -1.09
LIN28A-202ENST00000326279 FAM236DA0A1B0GTK5 79 aa8.21□□□□□ -1.1
LIN28A-202ENST00000326279 FAM236CP0DP71 79 aa8.21□□□□□ -1.1
LIN28A-202ENST00000326279 K7EQZ3 153 aa8.21□□□□□ -1.1
LIN28A-202ENST00000326279 OBSCN-AS1Q96MR7 158 aa8.2□□□□□ -1.1
LIN28A-202ENST00000326279 HCG22E2RYF7 251 aa8.19□□□□□ -1.1
LIN28A-202ENST00000326279 DNHD1Q96M86 4753 aa8.19□□□□□ -1.1
LIN28A-202ENST00000326279 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
LIN28A-202ENST00000326279 J3KT08 172 aa8.18□□□□□ -1.1
LIN28A-202ENST00000326279 ZNF861PO60384 105 aa8.18□□□□□ -1.1
LIN28A-202ENST00000326279 TMEM254Q8TBM7 123 aa8.18□□□□□ -1.1
LIN28A-202ENST00000326279 LINC01600Q96MT4 127 aa8.18□□□□□ -1.1
LIN28A-202ENST00000326279 LINC00336Q6ZUF6 198 aa8.17□□□□□ -1.1
LIN28A-202ENST00000326279 MPLKIPQ8TAP9 179 aa8.16□□□□□ -1.1
LIN28A-202ENST00000326279 CRYGAP11844 174 aa8.16□□□□□ -1.1
LIN28A-202ENST00000326279 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
LIN28A-202ENST00000326279 PCOTHQ58A44 107 aa8.15□□□□□ -1.1
LIN28A-202ENST00000326279 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.1
LIN28A-202ENST00000326279 IGLV7-43P04211 117 aa8.15□□□□□ -1.11
LIN28A-202ENST00000326279 IGLV5-48A0A075B6I7 105 aa8.13□□□□□ -1.11
LIN28A-202ENST00000326279 TMEM258P61165 79 aa8.13□□□□□ -1.11
LIN28A-202ENST00000326279 SPRR1AP35321 89 aa8.12□□□□□ -1.11
LIN28A-202ENST00000326279 KRTAP11-1Q8IUC1 163 aa8.12□□□□□ -1.11
LIN28A-202ENST00000326279 KRTAP7-1Q8IUC3 87 aa8.11□□□□□ -1.11
LIN28A-202ENST00000326279 SPRR4Q96PI1 79 aa8.11□□□□□ -1.11
LIN28A-202ENST00000326279 H0Y9P7 68 aa8.1□□□□□ -1.11
LIN28A-202ENST00000326279 hDV103S1A0JD37 113 aa8.08□□□□□ -1.12
LIN28A-202ENST00000326279 C5orf47Q569G3 176 aa8.07□□□□□ -1.12
LIN28A-202ENST00000326279 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
LIN28A-202ENST00000326279 A0A1B0GW54 56 aa8.06□□□□□ -1.12
LIN28A-202ENST00000326279 CHKB-CPT1BH3BT56 60 aa8.06□□□□□ -1.12
LIN28A-202ENST00000326279 NDUFC1O43677 76 aa8.06□□□□□ -1.12
LIN28A-202ENST00000326279 PLAC8Q9NZF1 115 aa8.04□□□□□ -1.12
LIN28A-202ENST00000326279 KRTAP4-16G5E9R7 235 aaPredicted RBP8.03□□□□□ -1.12
LIN28A-202ENST00000326279 C1orf64Q8NEQ6 169 aa8.03□□□□□ -1.12
LIN28A-202ENST00000326279 A8MWP4 228 aa8.02□□□□□ -1.12
LIN28A-202ENST00000326279 PRR15Q8IV56 129 aa8□□□□□ -1.13
LIN28A-202ENST00000326279 J3QL48 77 aa8□□□□□ -1.13
LIN28A-202ENST00000326279 DSCR10P59022 87 aa7.99□□□□□ -1.13
LIN28A-202ENST00000326279 IGKV2D-30A0A075B6S6 120 aa7.98□□□□□ -1.13
LIN28A-202ENST00000326279 IGKV2-30P06310 120 aa7.98□□□□□ -1.13
LIN28A-202ENST00000326279 LIMD2Q9BT23 127 aa7.97□□□□□ -1.13
LIN28A-202ENST00000326279 C9orf92A6NGG3 77 aa7.96□□□□□ -1.14
LIN28A-202ENST00000326279 LINC00313P59037 77 aa7.94□□□□□ -1.14
LIN28A-202ENST00000326279 LINC00304Q8N9R0 145 aa7.94□□□□□ -1.14
LIN28A-202ENST00000326279 SSBP3-AS1Q7Z2R9 100 aa7.94□□□□□ -1.14
LIN28A-202ENST00000326279 TRAV22A0A0B4J277 110 aa7.94□□□□□ -1.14
LIN28A-202ENST00000326279 CYSTM1Q9H1C7 97 aa7.93□□□□□ -1.14
LIN28A-202ENST00000326279 C8orf17Q9NRJ1 99 aa7.93□□□□□ -1.14
LIN28A-202ENST00000326279 Q5VSD8 79 aa7.92□□□□□ -1.14
LIN28A-202ENST00000326279 BRK1Q8WUW1 75 aa7.92□□□□□ -1.14
LIN28A-202ENST00000326279 SERP1Q9Y6X1 66 aa7.91□□□□□ -1.14
LIN28A-202ENST00000326279 A0A1B0GVX0 72 aa7.9□□□□□ -1.14
LIN28A-202ENST00000326279 Q96NJ1 140 aa7.9□□□□□ -1.14
LIN28A-202ENST00000326279 HUWE1Q7Z6Z7 4374 aaKnown RBP7.9□□□□□ -1.14
LIN28A-202ENST00000326279 MRPL34Q9BQ48 92 aaKnown RBP7.89□□□□□ -1.15
LIN28A-202ENST00000326279 SPINK1P00995 79 aa7.89□□□□□ -1.15
LIN28A-202ENST00000326279 ATP5EP56381 51 aaPredicted RBP7.88□□□□□ -1.15
LIN28A-202ENST00000326279 A0A087X002 238 aa7.87□□□□□ -1.15
LIN28A-202ENST00000326279 H7BZZ5 65 aa7.87□□□□□ -1.15
LIN28A-202ENST00000326279 PSPHP1O15172 72 aa7.87□□□□□ -1.15
LIN28A-202ENST00000326279 SMIM26A0A096LP01 95 aa7.87□□□□□ -1.15
LIN28A-202ENST00000326279 OCR1Q9BZK8 76 aa7.86□□□□□ -1.15
LIN28A-202ENST00000326279 KLKP1Q107X0 134 aa7.86□□□□□ -1.15
LIN28A-202ENST00000326279 SPRR1BP22528 89 aa7.85□□□□□ -1.15
LIN28A-202ENST00000326279 TP53AIP1Q9HCN2 124 aa7.85□□□□□ -1.15
LIN28A-202ENST00000326279 IGLV8-61A0A075B6I0 122 aa7.81□□□□□ -1.16
LIN28A-202ENST00000326279 LINC00472Q9H8W2 130 aa7.81□□□□□ -1.16
LIN28A-202ENST00000326279 PRKDCP78527 4128 aaKnown RBP7.81□□□□□ -1.16
LIN28A-202ENST00000326279 A0A0U1RQV1 116 aa7.81□□□□□ -1.16
LIN28A-202ENST00000326279 C4orf26Q17RF5 130 aa7.8□□□□□ -1.16
LIN28A-202ENST00000326279 ANK2Q01484 3957 aa7.79□□□□□ -1.16
LIN28A-202ENST00000326279 SPTSSBQ8NFR3 76 aa7.79□□□□□ -1.16
LIN28A-202ENST00000326279 DNAH9Q9NYC9 4486 aa7.77□□□□□ -1.16
LIN28A-202ENST00000326279 PRR15LQ9BU68 103 aa7.76□□□□□ -1.17
LIN28A-202ENST00000326279 MMP24-AS1A0A0U1RRL7 71 aa7.75□□□□□ -1.17
LIN28A-202ENST00000326279 SPAG11AQ6PDA7 123 aa7.74□□□□□ -1.17
LIN28A-202ENST00000326279 A6NED7 52 aa7.74□□□□□ -1.17
LIN28A-202ENST00000326279 C8orf87E5RJ46 101 aa7.74□□□□□ -1.17
LIN28A-202ENST00000326279 C7orf65Q6ZTY9 151 aa7.72□□□□□ -1.17
LIN28A-202ENST00000326279 KRTAP13-1Q8IUC0 172 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms