RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 HTTP42858 3142 aa5.56□□□□□ -1.52
SH3TC2-201ENST00000323829 ATRQ13535 2644 aa5.56□□□□□ -1.52
SH3TC2-201ENST00000323829 TNP2Q05952 138 aa5.56□□□□□ -1.52
SH3TC2-201ENST00000323829 CHD9Q3L8U1 2897 aa5.56□□□□□ -1.52
SH3TC2-201ENST00000323829 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
SH3TC2-201ENST00000323829 RPL37P61927 97 aaKnown RBP5.55□□□□□ -1.52
SH3TC2-201ENST00000323829 AKAP13Q12802 2813 aa5.54□□□□□ -1.52
SH3TC2-201ENST00000323829 P0C880 135 aa5.54□□□□□ -1.52
SH3TC2-201ENST00000323829 Q75L30 129 aa5.54□□□□□ -1.52
SH3TC2-201ENST00000323829 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
SH3TC2-201ENST00000323829 MKI67P46013 3256 aaKnown RBP5.54□□□□□ -1.52
SH3TC2-201ENST00000323829 Q8NDZ9 215 aa5.54□□□□□ -1.52
SH3TC2-201ENST00000323829 KRTAP1-1Q07627 177 aa5.53□□□□□ -1.52
SH3TC2-201ENST00000323829 PRR34Q9NV39 138 aa5.53□□□□□ -1.52
SH3TC2-201ENST00000323829 TRANK1O15050 2925 aa5.53□□□□□ -1.52
SH3TC2-201ENST00000323829 SPATA8Q6RVD6 105 aa5.52□□□□□ -1.53
SH3TC2-201ENST00000323829 RANBP2P49792 3224 aaKnown RBP5.51□□□□□ -1.53
SH3TC2-201ENST00000323829 FAM229BQ4G0N7 80 aa5.51□□□□□ -1.53
SH3TC2-201ENST00000323829 MGAM2Q2M2H8 2515 aa5.51□□□□□ -1.53
SH3TC2-201ENST00000323829 NBEAQ8NFP9 2946 aa5.5□□□□□ -1.53
SH3TC2-201ENST00000323829 MAST4O15021 2626 aa5.5□□□□□ -1.53
SH3TC2-201ENST00000323829 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
SH3TC2-201ENST00000323829 GIG44P09565 113 aaPredicted RBP5.49□□□□□ -1.53
SH3TC2-201ENST00000323829 VPS13AQ96RL7 3174 aa5.48□□□□□ -1.53
SH3TC2-201ENST00000323829 CENPEQ02224 2701 aa5.48□□□□□ -1.53
SH3TC2-201ENST00000323829 HECTD1Q9ULT8 2610 aa5.46□□□□□ -1.53
SH3TC2-201ENST00000323829 DSPP15924 2871 aaKnown RBP5.46□□□□□ -1.54
SH3TC2-201ENST00000323829 TRIOO75962 3097 aa5.46□□□□□ -1.54
SH3TC2-201ENST00000323829 FREM2Q5SZK8 3169 aa5.45□□□□□ -1.54
SH3TC2-201ENST00000323829 CNBPP62633 177 aaKnown RBP5.44□□□□□ -1.54
SH3TC2-201ENST00000323829 CHD6Q8TD26 2715 aa5.44□□□□□ -1.54
SH3TC2-201ENST00000323829 FRYQ5TBA9 3013 aa5.44□□□□□ -1.54
SH3TC2-201ENST00000323829 LAMA3Q16787 3333 aa5.43□□□□□ -1.54
SH3TC2-201ENST00000323829 LCE6AA0A183 80 aa5.42□□□□□ -1.54
SH3TC2-201ENST00000323829 Q5W150 140 aa5.42□□□□□ -1.54
SH3TC2-201ENST00000323829 XIRP2A4UGR9 3374 aa5.42□□□□□ -1.54
SH3TC2-201ENST00000323829 MGAQ8IWI9 3026 aa5.42□□□□□ -1.54
SH3TC2-201ENST00000323829 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
SH3TC2-201ENST00000323829 BRCA2P51587 3418 aa5.42□□□□□ -1.54
SH3TC2-201ENST00000323829 MAP1AP78559 2803 aaPredicted RBP5.4□□□□□ -1.54
SH3TC2-201ENST00000323829 UNC80Q8N2C7 3258 aa5.4□□□□□ -1.54
SH3TC2-201ENST00000323829 SETXQ7Z333 2677 aaKnown RBP5.4□□□□□ -1.54
SH3TC2-201ENST00000323829 Q5VV11 94 aa5.4□□□□□ -1.54
SH3TC2-201ENST00000323829 WDFY4Q6ZS81 3184 aa5.39□□□□□ -1.55
SH3TC2-201ENST00000323829 FLNAP21333 2647 aaKnown RBP5.39□□□□□ -1.55
SH3TC2-201ENST00000323829 GCN1Q92616 2671 aaKnown RBP5.38□□□□□ -1.55
SH3TC2-201ENST00000323829 UNC79Q9P2D8 2635 aa5.36□□□□□ -1.55
SH3TC2-201ENST00000323829 Q6ZR54 194 aa5.36□□□□□ -1.55
SH3TC2-201ENST00000323829 KALRNO60229 2985 aa5.33□□□□□ -1.56
SH3TC2-201ENST00000323829 CELSR3Q9NYQ7 3312 aa5.33□□□□□ -1.56
SH3TC2-201ENST00000323829 ITPR3Q14573 2671 aa5.33□□□□□ -1.56
SH3TC2-201ENST00000323829 SPRR1BP22528 89 aa5.32□□□□□ -1.56
SH3TC2-201ENST00000323829 PRUNE2Q8WUY3 3088 aa5.32□□□□□ -1.56
SH3TC2-201ENST00000323829 A8MUU9 505 aa5.32□□□□□ -1.56
SH3TC2-201ENST00000323829 DNAH14Q0VDD8 3507 aa5.32□□□□□ -1.56
SH3TC2-201ENST00000323829 LAMA1P25391 3075 aa5.31□□□□□ -1.56
SH3TC2-201ENST00000323829 MMP24-AS1A0A0U1RRL7 71 aa5.31□□□□□ -1.56
SH3TC2-201ENST00000323829 ITPR1Q14643 2758 aa5.29□□□□□ -1.56
SH3TC2-201ENST00000323829 NBEAL2Q6ZNJ1 2754 aa5.28□□□□□ -1.56
SH3TC2-201ENST00000323829 VCANP13611 3396 aa5.28□□□□□ -1.56
SH3TC2-201ENST00000323829 TNP1P09430 55 aa5.28□□□□□ -1.56
SH3TC2-201ENST00000323829 A8MU10 97 aa5.27□□□□□ -1.57
SH3TC2-201ENST00000323829 SPRR1AP35321 89 aa5.27□□□□□ -1.57
SH3TC2-201ENST00000323829 NOTCH1P46531 2555 aa5.27□□□□□ -1.57
SH3TC2-201ENST00000323829 PLAC8Q9NZF1 115 aa5.26□□□□□ -1.57
SH3TC2-201ENST00000323829 REV3LO60673 3130 aa5.26□□□□□ -1.57
SH3TC2-201ENST00000323829 ZNF292O60281 2723 aa5.25□□□□□ -1.57
SH3TC2-201ENST00000323829 CDH23Q9H251 3354 aa5.24□□□□□ -1.57
SH3TC2-201ENST00000323829 HELZ2Q9BYK8 2649 aaKnown RBP5.24□□□□□ -1.57
SH3TC2-201ENST00000323829 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
SH3TC2-201ENST00000323829 FRYLO94915 3013 aa5.23□□□□□ -1.57
SH3TC2-201ENST00000323829 KRTAP10-1P60331 282 aa5.23□□□□□ -1.57
SH3TC2-201ENST00000323829 KRTAP10-8P60410 259 aa5.23□□□□□ -1.57
SH3TC2-201ENST00000323829 NBEAL1Q6ZS30 2694 aa5.23□□□□□ -1.57
SH3TC2-201ENST00000323829 TEP1Q99973 2627 aaKnown RBP5.23□□□□□ -1.57
SH3TC2-201ENST00000323829 PANO1I0J062 215 aa5.23□□□□□ -1.57
SH3TC2-201ENST00000323829 CFAP46Q8IYW2 2715 aa5.23□□□□□ -1.57
SH3TC2-201ENST00000323829 LINC00472Q9H8W2 130 aa5.22□□□□□ -1.57
SH3TC2-201ENST00000323829 TACC2O95359 2948 aa5.22□□□□□ -1.57
SH3TC2-201ENST00000323829 KRTAP10-2P60368 255 aa5.21□□□□□ -1.58
SH3TC2-201ENST00000323829 ADGRG4Q8IZF6 3080 aa5.21□□□□□ -1.58
SH3TC2-201ENST00000323829 ASB16-AS1Q495Z4 193 aa5.2□□□□□ -1.58
SH3TC2-201ENST00000323829 COL6A5A8TX70 2615 aa5.19□□□□□ -1.58
SH3TC2-201ENST00000323829 BAHCC1Q9P281 2608 aa5.19□□□□□ -1.58
SH3TC2-201ENST00000323829 A6NN06 94 aa5.17□□□□□ -1.58
SH3TC2-201ENST00000323829 KRTAP29-1A8MX34 341 aaPredicted RBP5.17□□□□□ -1.58
SH3TC2-201ENST00000323829 TEX15Q9BXT5 2789 aa5.16□□□□□ -1.58
SH3TC2-201ENST00000323829 STAB1Q9NY15 2570 aa5.16□□□□□ -1.58
SH3TC2-201ENST00000323829 A0A1B0GVY2 172 aa5.15□□□□□ -1.59
SH3TC2-201ENST00000323829 ASH1LQ9NR48 2969 aaKnown RBP5.14□□□□□ -1.59
SH3TC2-201ENST00000323829 DMBT1Q9UGM3 2413 aaPredicted RBP5.14□□□□□ -1.59
SH3TC2-201ENST00000323829 KRTAP4-16G5E9R7 235 aaPredicted RBP5.13□□□□□ -1.59
SH3TC2-201ENST00000323829 KRTAP26-1Q6PEX3 210 aa5.13□□□□□ -1.59
SH3TC2-201ENST00000323829 KRTAP1-5Q9BYS1 174 aa5.12□□□□□ -1.59
SH3TC2-201ENST00000323829 BOD1L1Q8NFC6 3051 aa5.12□□□□□ -1.59
SH3TC2-201ENST00000323829 LRBAP50851 2863 aa5.11□□□□□ -1.59
SH3TC2-201ENST00000323829 CRYBG3Q68DQ2 2970 aa5.11□□□□□ -1.59
SH3TC2-201ENST00000323829 KRTAP21-3Q3LHN1 58 aa5.1□□□□□ -1.59
SH3TC2-201ENST00000323829 DMXL2Q8TDJ6 3036 aa5.1□□□□□ -1.59
SH3TC2-201ENST00000323829 CFAP47Q6ZTR5 3102 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms