RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 COL6A5A8TX70 2615 aa11.38□□□□□ -0.59
PRKCB-202ENST00000321728 IGFL1Q6UW32 110 aa11.38□□□□□ -0.59
PRKCB-202ENST00000321728 REG3GQ6UW15 175 aa11.37□□□□□ -0.59
PRKCB-202ENST00000321728 LINC00208Q96KT6 92 aa11.37□□□□□ -0.59
PRKCB-202ENST00000321728 A0A087WSZ3 146 aa11.36□□□□□ -0.59
PRKCB-202ENST00000321728 DNAH10OSP0CZ25 163 aa11.35□□□□□ -0.59
PRKCB-202ENST00000321728 A8MUN3 132 aa11.35□□□□□ -0.59
PRKCB-202ENST00000321728 RPL37AP61513 92 aaKnown RBP11.34□□□□□ -0.59
PRKCB-202ENST00000321728 PMAIP1Q13794 54 aa11.33□□□□□ -0.59
PRKCB-202ENST00000321728 NBEAL1Q6ZS30 2694 aa11.33□□□□□ -0.6
PRKCB-202ENST00000321728 B9D2Q9BPU9 175 aa11.33□□□□□ -0.6
PRKCB-202ENST00000321728 C11orf45Q8TAV5 145 aa11.32□□□□□ -0.6
PRKCB-202ENST00000321728 PRLHP81277 87 aa11.31□□□□□ -0.6
PRKCB-202ENST00000321728 CSMD3Q7Z407 3707 aa11.3□□□□□ -0.6
PRKCB-202ENST00000321728 H0Y9P7 68 aa11.28□□□□□ -0.6
PRKCB-202ENST00000321728 CASC2Q6XLA1 102 aa11.26□□□□□ -0.61
PRKCB-202ENST00000321728 LINC00588Q9Y4M8 146 aa11.25□□□□□ -0.61
PRKCB-202ENST00000321728 SRRM2Q9UQ35 2752 aaKnown RBP11.25□□□□□ -0.61
PRKCB-202ENST00000321728 LYSTQ99698 3801 aa11.25□□□□□ -0.61
PRKCB-202ENST00000321728 KRTAP29-1A8MX34 341 aaPredicted RBP11.25□□□□□ -0.61
PRKCB-202ENST00000321728 A8MU10 97 aa11.24□□□□□ -0.61
PRKCB-202ENST00000321728 Q5VV11 94 aa11.24□□□□□ -0.61
PRKCB-202ENST00000321728 UBE2AP49459 152 aa11.23□□□□□ -0.61
PRKCB-202ENST00000321728 CMYA5Q8N3K9 4069 aa11.23□□□□□ -0.61
PRKCB-202ENST00000321728 IGKV2-24A0A0C4DH68 120 aa11.22□□□□□ -0.61
PRKCB-202ENST00000321728 SPANXA2-OT1Q8N9U9 137 aa11.22□□□□□ -0.61
PRKCB-202ENST00000321728 IGLV8-61A0A075B6I0 122 aa11.21□□□□□ -0.61
PRKCB-202ENST00000321728 CHKB-CPT1BH3BT56 60 aa11.21□□□□□ -0.61
PRKCB-202ENST00000321728 CNBPP62633 177 aaKnown RBP11.19□□□□□ -0.62
PRKCB-202ENST00000321728 Q8N9P0 234 aaPredicted RBP11.19□□□□□ -0.62
PRKCB-202ENST00000321728 H3BPC8 53 aa11.18□□□□□ -0.62
PRKCB-202ENST00000321728 PRR15LQ9BU68 103 aa11.18□□□□□ -0.62
PRKCB-202ENST00000321728 DNAH10Q8IVF4 4471 aa11.18□□□□□ -0.62
PRKCB-202ENST00000321728 LIMD2Q9BT23 127 aa11.17□□□□□ -0.62
PRKCB-202ENST00000321728 A0A096LNI7 61 aa11.17□□□□□ -0.62
PRKCB-202ENST00000321728 A8MWP4 228 aa11.15□□□□□ -0.62
PRKCB-202ENST00000321728 TENM2Q9NT68 2774 aa11.15□□□□□ -0.62
PRKCB-202ENST00000321728 DNAH1Q9P2D7 4330 aa11.14□□□□□ -0.63
PRKCB-202ENST00000321728 H0Y9J4 135 aa11.13□□□□□ -0.63
PRKCB-202ENST00000321728 KRTAP24-1Q3LI83 254 aa11.12□□□□□ -0.63
PRKCB-202ENST00000321728 STAB2Q8WWQ8 2551 aa11.12□□□□□ -0.63
PRKCB-202ENST00000321728 C9orf163Q8N9P6 203 aa11.12□□□□□ -0.63
PRKCB-202ENST00000321728 MGAM2Q2M2H8 2515 aa11.12□□□□□ -0.63
PRKCB-202ENST00000321728 LINC00472Q9H8W2 130 aa11.12□□□□□ -0.63
PRKCB-202ENST00000321728 C16orf90A8MZG2 172 aa11.11□□□□□ -0.63
PRKCB-202ENST00000321728 SPTSSBQ8NFR3 76 aa11.1□□□□□ -0.63
PRKCB-202ENST00000321728 COA5Q86WW8 74 aa11.09□□□□□ -0.63
PRKCB-202ENST00000321728 PHF5AQ7RTV0 110 aaKnown RBP11.06□□□□□ -0.64
PRKCB-202ENST00000321728 KRTAP11-1Q8IUC1 163 aa11.06□□□□□ -0.64
PRKCB-202ENST00000321728 A6NED7 52 aa11.05□□□□□ -0.64
PRKCB-202ENST00000321728 PCOTHQ58A44 107 aa11.05□□□□□ -0.64
PRKCB-202ENST00000321728 COL7A1Q02388 2944 aa11.04□□□□□ -0.64
PRKCB-202ENST00000321728 MMP24-AS1A0A0U1RRL7 71 aa11.04□□□□□ -0.64
PRKCB-202ENST00000321728 CHTF8P0CG12 524 aa11.03□□□□□ -0.64
PRKCB-202ENST00000321728 IGLV7-46A0A075B6I9 117 aa11.03□□□□□ -0.64
PRKCB-202ENST00000321728 SPRR1BP22528 89 aa11.02□□□□□ -0.64
PRKCB-202ENST00000321728 HUWE1Q7Z6Z7 4374 aaKnown RBP11.02□□□□□ -0.65
PRKCB-202ENST00000321728 Q75L30 129 aa11.02□□□□□ -0.65
PRKCB-202ENST00000321728 LCA10Q71F78 164 aa11.02□□□□□ -0.65
PRKCB-202ENST00000321728 KRTAP1-5Q9BYS1 174 aa11□□□□□ -0.65
PRKCB-202ENST00000321728 DNAH3Q8TD57 4116 aa11□□□□□ -0.65
PRKCB-202ENST00000321728 CD164Q04900 197 aa10.99□□□□□ -0.65
PRKCB-202ENST00000321728 LOC101927531A0A1B0GV80 90 aa10.98□□□□□ -0.65
PRKCB-202ENST00000321728 DNAH9Q9NYC9 4486 aa10.98□□□□□ -0.65
PRKCB-202ENST00000321728 ATP11AUNQ6ZP68 121 aa10.97□□□□□ -0.65
PRKCB-202ENST00000321728 KTN1-AS1Q86SY8 53 aa10.96□□□□□ -0.65
PRKCB-202ENST00000321728 SPAG11AQ6PDA7 123 aa10.96□□□□□ -0.66
PRKCB-202ENST00000321728 NDUFS5O43920 106 aa10.92□□□□□ -0.66
PRKCB-202ENST00000321728 TP53AIP1Q9HCN2 124 aa10.92□□□□□ -0.66
PRKCB-202ENST00000321728 DNAH7Q8WXX0 4024 aa10.92□□□□□ -0.66
PRKCB-202ENST00000321728 IGLV9-49A0A0B4J1Y8 123 aa10.91□□□□□ -0.66
PRKCB-202ENST00000321728 K7EIL1 84 aa10.9□□□□□ -0.67
PRKCB-202ENST00000321728 CDC42SE1Q9NRR8 79 aa10.89□□□□□ -0.67
PRKCB-202ENST00000321728 MOBPQ13875 183 aa10.89□□□□□ -0.67
PRKCB-202ENST00000321728 Q96NJ1 140 aa10.88□□□□□ -0.67
PRKCB-202ENST00000321728 C8orf17Q9NRJ1 99 aa10.88□□□□□ -0.67
PRKCB-202ENST00000321728 LINC01558Q9Y6Z2 57 aa10.87□□□□□ -0.67
PRKCB-202ENST00000321728 IGHV6-1A0A0B4J1U7 121 aa10.87□□□□□ -0.67
PRKCB-202ENST00000321728 A6NN06 94 aa10.85□□□□□ -0.67
PRKCB-202ENST00000321728 ASB16-AS1Q495Z4 193 aa10.85□□□□□ -0.67
PRKCB-202ENST00000321728 C14orf177Q52M58 125 aa10.85□□□□□ -0.67
PRKCB-202ENST00000321728 Q6ZR54 194 aa10.85□□□□□ -0.67
PRKCB-202ENST00000321728 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
PRKCB-202ENST00000321728 RBM12B-AS1Q9P1G2 102 aa10.84□□□□□ -0.67
PRKCB-202ENST00000321728 HRES1P13985 223 aa10.82□□□□□ -0.68
PRKCB-202ENST00000321728 PLAC8Q9NZF1 115 aa10.81□□□□□ -0.68
PRKCB-202ENST00000321728 CDK2AP2O75956 126 aa10.81□□□□□ -0.68
PRKCB-202ENST00000321728 KRTAP13-1Q8IUC0 172 aa10.8□□□□□ -0.68
PRKCB-202ENST00000321728 A0A1B0GVX0 72 aa10.8□□□□□ -0.68
PRKCB-202ENST00000321728 SPINK7P58062 85 aa10.8□□□□□ -0.68
PRKCB-202ENST00000321728 PANO1I0J062 215 aa10.79□□□□□ -0.68
PRKCB-202ENST00000321728 MRPL34Q9BQ48 92 aaKnown RBP10.77□□□□□ -0.69
PRKCB-202ENST00000321728 A0A087X002 238 aa10.73□□□□□ -0.69
PRKCB-202ENST00000321728 NOTCH2NLQ7Z3S9 236 aa10.73□□□□□ -0.69
PRKCB-202ENST00000321728 C7orf65Q6ZTY9 151 aa10.72□□□□□ -0.69
PRKCB-202ENST00000321728 PRR26Q8N8Z3 221 aa10.71□□□□□ -0.7
PRKCB-202ENST00000321728 PLECQ15149 4684 aaKnown RBP10.68□□□□□ -0.7
PRKCB-202ENST00000321728 LINC00483Q53H64 154 aa10.68□□□□□ -0.7
PRKCB-202ENST00000321728 ANAPC11Q9NYG5 84 aa10.68□□□□□ -0.7
PRKCB-202ENST00000321728 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms