RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 ATRQ13535 2644 aa11.86□□□□□ -0.51
UBE2N-201ENST00000318066 PRUNE2Q8WUY3 3088 aa11.85□□□□□ -0.51
UBE2N-201ENST00000318066 MAST4O15021 2626 aa11.85□□□□□ -0.51
UBE2N-201ENST00000318066 MGAQ8IWI9 3026 aa11.84□□□□□ -0.51
UBE2N-201ENST00000318066 A0A0C4DFX4 3053 aa11.82□□□□□ -0.52
UBE2N-201ENST00000318066 DMAC1Q96GE9 116 aa11.81□□□□□ -0.52
UBE2N-201ENST00000318066 ZNF292O60281 2723 aa11.81□□□□□ -0.52
UBE2N-201ENST00000318066 Q6ZSA8 131 aa11.78□□□□□ -0.52
UBE2N-201ENST00000318066 ZCCHC13Q8WW36 166 aaKnown RBP11.78□□□□□ -0.52
UBE2N-201ENST00000318066 PLAC8Q9NZF1 115 aa11.78□□□□□ -0.52
UBE2N-201ENST00000318066 Q5VV11 94 aa11.77□□□□□ -0.53
UBE2N-201ENST00000318066 WDFY4Q6ZS81 3184 aa11.76□□□□□ -0.53
UBE2N-201ENST00000318066 LINC00472Q9H8W2 130 aa11.75□□□□□ -0.53
UBE2N-201ENST00000318066 UNC80Q8N2C7 3258 aa11.75□□□□□ -0.53
UBE2N-201ENST00000318066 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.74□□□□□ -0.53
UBE2N-201ENST00000318066 LINC00483Q53H64 154 aa11.74□□□□□ -0.53
UBE2N-201ENST00000318066 TNP2Q05952 138 aa11.72□□□□□ -0.53
UBE2N-201ENST00000318066 CAMK2N1Q7Z7J9 78 aa11.7□□□□□ -0.54
UBE2N-201ENST00000318066 PRAC1Q96KF2 57 aa11.7□□□□□ -0.54
UBE2N-201ENST00000318066 CSAG1Q6PB30 78 aa11.68□□□□□ -0.54
UBE2N-201ENST00000318066 Q5W150 140 aa11.65□□□□□ -0.54
UBE2N-201ENST00000318066 Q8NDZ9 215 aa11.65□□□□□ -0.55
UBE2N-201ENST00000318066 XIRP2A4UGR9 3374 aa11.63□□□□□ -0.55
UBE2N-201ENST00000318066 TRIOO75962 3097 aa11.6□□□□□ -0.55
UBE2N-201ENST00000318066 ASB16-AS1Q495Z4 193 aa11.58□□□□□ -0.56
UBE2N-201ENST00000318066 AKAP13Q12802 2813 aa11.57□□□□□ -0.56
UBE2N-201ENST00000318066 S4R3F8 94 aa11.56□□□□□ -0.56
UBE2N-201ENST00000318066 DSPP15924 2871 aaKnown RBP11.56□□□□□ -0.56
UBE2N-201ENST00000318066 TEP1Q99973 2627 aaKnown RBP11.52□□□□□ -0.56
UBE2N-201ENST00000318066 MAP1AP78559 2803 aaPredicted RBP11.52□□□□□ -0.57
UBE2N-201ENST00000318066 A0A0A0MQY5 61 aa11.52□□□□□ -0.57
UBE2N-201ENST00000318066 SPINK7P58062 85 aa11.51□□□□□ -0.57
UBE2N-201ENST00000318066 VPS13AQ96RL7 3174 aa11.51□□□□□ -0.57
UBE2N-201ENST00000318066 CHD6Q8TD26 2715 aa11.51□□□□□ -0.57
UBE2N-201ENST00000318066 KRTAP26-1Q6PEX3 210 aa11.5□□□□□ -0.57
UBE2N-201ENST00000318066 CDH23Q9H251 3354 aa11.49□□□□□ -0.57
UBE2N-201ENST00000318066 RPL37P61927 97 aaKnown RBP11.46□□□□□ -0.57
UBE2N-201ENST00000318066 Q6ZR54 194 aa11.46□□□□□ -0.57
UBE2N-201ENST00000318066 TEX15Q9BXT5 2789 aa11.44□□□□□ -0.58
UBE2N-201ENST00000318066 R4GN34 69 aa11.4□□□□□ -0.58
UBE2N-201ENST00000318066 ROMO1P60602 79 aa11.39□□□□□ -0.59
UBE2N-201ENST00000318066 STAB1Q9NY15 2570 aa11.38□□□□□ -0.59
UBE2N-201ENST00000318066 SEC61BP60468 96 aaKnown RBP11.37□□□□□ -0.59
UBE2N-201ENST00000318066 KRTAP29-1A8MX34 341 aaPredicted RBP11.37□□□□□ -0.59
UBE2N-201ENST00000318066 KRTAP4-16G5E9R7 235 aaPredicted RBP11.36□□□□□ -0.59
UBE2N-201ENST00000318066 H1FX-AS1Q4G0G2 97 aa11.34□□□□□ -0.59
UBE2N-201ENST00000318066 IGSF10Q6WRI0 2623 aa11.33□□□□□ -0.6
UBE2N-201ENST00000318066 SETXQ7Z333 2677 aaKnown RBP11.32□□□□□ -0.6
UBE2N-201ENST00000318066 COL6A5A8TX70 2615 aa11.32□□□□□ -0.6
UBE2N-201ENST00000318066 FLG2Q5D862 2391 aaPredicted RBP11.32□□□□□ -0.6
UBE2N-201ENST00000318066 M0R2T5 61 aa11.3□□□□□ -0.6
UBE2N-201ENST00000318066 FRYQ5TBA9 3013 aa11.3□□□□□ -0.6
UBE2N-201ENST00000318066 UNC79Q9P2D8 2635 aa11.3□□□□□ -0.6
UBE2N-201ENST00000318066 KRTAP1-5Q9BYS1 174 aa11.3□□□□□ -0.6
UBE2N-201ENST00000318066 SZT2Q5T011 3432 aa11.26□□□□□ -0.61
UBE2N-201ENST00000318066 A6NN06 94 aa11.25□□□□□ -0.61
UBE2N-201ENST00000318066 NOTCH1P46531 2555 aa11.25□□□□□ -0.61
UBE2N-201ENST00000318066 GCN1Q92616 2671 aaKnown RBP11.24□□□□□ -0.61
UBE2N-201ENST00000318066 CELSR3Q9NYQ7 3312 aa11.23□□□□□ -0.61
UBE2N-201ENST00000318066 LAMA1P25391 3075 aa11.22□□□□□ -0.61
UBE2N-201ENST00000318066 SPATA8Q6RVD6 105 aa11.21□□□□□ -0.62
UBE2N-201ENST00000318066 UBR5O95071 2799 aaPredicted RBP11.17□□□□□ -0.62
UBE2N-201ENST00000318066 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
UBE2N-201ENST00000318066 VCANP13611 3396 aa11.15□□□□□ -0.62
UBE2N-201ENST00000318066 M0QZ58 72 aa11.13□□□□□ -0.63
UBE2N-201ENST00000318066 KRTAP10-1P60331 282 aa11.12□□□□□ -0.63
UBE2N-201ENST00000318066 RPS29P62273 56 aaKnown RBP11.12□□□□□ -0.63
UBE2N-201ENST00000318066 LCE6AA0A183 80 aa11.12□□□□□ -0.63
UBE2N-201ENST00000318066 NBEAL2Q6ZNJ1 2754 aa11.1□□□□□ -0.63
UBE2N-201ENST00000318066 FLNCQ14315 2725 aa11.08□□□□□ -0.64
UBE2N-201ENST00000318066 PANO1I0J062 215 aa11.08□□□□□ -0.64
UBE2N-201ENST00000318066 Q5VSD8 79 aa11.08□□□□□ -0.64
UBE2N-201ENST00000318066 ATMQ13315 3056 aa11.06□□□□□ -0.64
UBE2N-201ENST00000318066 DMBT1Q9UGM3 2413 aaPredicted RBP11.06□□□□□ -0.64
UBE2N-201ENST00000318066 FRYLO94915 3013 aa11.05□□□□□ -0.64
UBE2N-201ENST00000318066 FREM2Q5SZK8 3169 aa11.04□□□□□ -0.64
UBE2N-201ENST00000318066 KRTAP10-2P60368 255 aa11.03□□□□□ -0.64
UBE2N-201ENST00000318066 DNAH14Q0VDD8 3507 aa11.02□□□□□ -0.65
UBE2N-201ENST00000318066 KRTAP16-1A8MUX0 517 aa11□□□□□ -0.65
UBE2N-201ENST00000318066 NBEAQ8NFP9 2946 aa11□□□□□ -0.65
UBE2N-201ENST00000318066 BOD1L1Q8NFC6 3051 aa11□□□□□ -0.65
UBE2N-201ENST00000318066 TACC2O95359 2948 aa10.99□□□□□ -0.65
UBE2N-201ENST00000318066 BAHCC1Q9P281 2608 aa10.99□□□□□ -0.65
UBE2N-201ENST00000318066 ADM2Q7Z4H4 148 aa10.98□□□□□ -0.65
UBE2N-201ENST00000318066 COL12A1Q99715 3063 aa10.98□□□□□ -0.65
UBE2N-201ENST00000318066 ITPR1Q14643 2758 aa10.97□□□□□ -0.65
UBE2N-201ENST00000318066 KALRNO60229 2985 aa10.97□□□□□ -0.65
UBE2N-201ENST00000318066 ADGRG4Q8IZF6 3080 aa10.97□□□□□ -0.65
UBE2N-201ENST00000318066 A0A087X002 238 aa10.96□□□□□ -0.66
UBE2N-201ENST00000318066 PLAC4Q8WY50 150 aa10.93□□□□□ -0.66
UBE2N-201ENST00000318066 A8MU10 97 aa10.93□□□□□ -0.66
UBE2N-201ENST00000318066 DMXL2Q8TDJ6 3036 aa10.92□□□□□ -0.66
UBE2N-201ENST00000318066 KRTAP25-1Q3LHN0 102 aa10.91□□□□□ -0.66
UBE2N-201ENST00000318066 COL6A3P12111 3177 aa10.91□□□□□ -0.66
UBE2N-201ENST00000318066 NOTCH2NLQ7Z3S9 236 aa10.9□□□□□ -0.66
UBE2N-201ENST00000318066 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
UBE2N-201ENST00000318066 ITPR2Q14571 2701 aa10.84□□□□□ -0.67
UBE2N-201ENST00000318066 LRBAP50851 2863 aa10.81□□□□□ -0.68
UBE2N-201ENST00000318066 Q6ZRN7 208 aaPredicted RBP10.8□□□□□ -0.68
UBE2N-201ENST00000318066 KRTAP13-1Q8IUC0 172 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms