RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 TENM4Q6N022 2769 aa7.12□□□□□ -1.27
HNF4A-201ENST00000316099 LINC00313P59037 77 aa7.12□□□□□ -1.27
HNF4A-201ENST00000316099 KTN1-AS1Q86SY8 53 aa7.11□□□□□ -1.27
HNF4A-201ENST00000316099 OBSCN-AS1Q96MR7 158 aa7.11□□□□□ -1.27
HNF4A-201ENST00000316099 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
HNF4A-201ENST00000316099 ZFHX3Q15911 3703 aa7.11□□□□□ -1.27
HNF4A-201ENST00000316099 CHTF8P0CG12 524 aa7.1□□□□□ -1.27
HNF4A-201ENST00000316099 KMT2BQ9UMN6 2715 aaPredicted RBP7.1□□□□□ -1.27
HNF4A-201ENST00000316099 PRR15Q8IV56 129 aa7.09□□□□□ -1.28
HNF4A-201ENST00000316099 MXRA5Q9NR99 2828 aa7.09□□□□□ -1.28
HNF4A-201ENST00000316099 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
HNF4A-201ENST00000316099 UQCR11O14957 56 aa7.08□□□□□ -1.28
HNF4A-201ENST00000316099 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
HNF4A-201ENST00000316099 IGFL1Q6UW32 110 aa7.08□□□□□ -1.28
HNF4A-201ENST00000316099 LINC00588Q9Y4M8 146 aa7.08□□□□□ -1.28
HNF4A-201ENST00000316099 C9orf129Q5T035 196 aaKnown RBP7.07□□□□□ -1.28
HNF4A-201ENST00000316099 DNAH10OSP0CZ25 163 aa7.07□□□□□ -1.28
HNF4A-201ENST00000316099 SPINT4Q6UDR6 99 aa7.07□□□□□ -1.28
HNF4A-201ENST00000316099 PRR34Q9NV39 138 aa7.07□□□□□ -1.28
HNF4A-201ENST00000316099 SPACA4Q8TDM5 124 aa7.06□□□□□ -1.28
HNF4A-201ENST00000316099 Q8N377 158 aa7.06□□□□□ -1.28
HNF4A-201ENST00000316099 SPANXA2-OT1Q8N9U9 137 aa7.06□□□□□ -1.28
HNF4A-201ENST00000316099 PDZD2O15018 2839 aa7.06□□□□□ -1.28
HNF4A-201ENST00000316099 FAM168BA1KXE4 195 aa7.06□□□□□ -1.28
HNF4A-201ENST00000316099 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
HNF4A-201ENST00000316099 LCA10Q71F78 164 aa7.04□□□□□ -1.28
HNF4A-201ENST00000316099 C8orf17Q9NRJ1 99 aa7.04□□□□□ -1.28
HNF4A-201ENST00000316099 TEP1Q99973 2627 aaKnown RBP7.03□□□□□ -1.28
HNF4A-201ENST00000316099 HIVEP1P15822 2718 aa7.03□□□□□ -1.28
HNF4A-201ENST00000316099 MIR22HGQ0VDD5 57 aa7.02□□□□□ -1.28
HNF4A-201ENST00000316099 C15orf56Q8N910 161 aa7.02□□□□□ -1.29
HNF4A-201ENST00000316099 IGLV8-61A0A075B6I0 122 aa7.02□□□□□ -1.29
HNF4A-201ENST00000316099 TLX1NBP0CAT3 122 aa7.02□□□□□ -1.29
HNF4A-201ENST00000316099 Q1T7F1 81 aa7.01□□□□□ -1.29
HNF4A-201ENST00000316099 RTL8CO15255 209 aa7.01□□□□□ -1.29
HNF4A-201ENST00000316099 NF1P21359 2839 aa7.01□□□□□ -1.29
HNF4A-201ENST00000316099 MAST4O15021 2626 aa7□□□□□ -1.29
HNF4A-201ENST00000316099 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
HNF4A-201ENST00000316099 A0A1B0GVX0 72 aa7□□□□□ -1.29
HNF4A-201ENST00000316099 NBDYA0A0U1RRE5 68 aa6.99□□□□□ -1.29
HNF4A-201ENST00000316099 BAHCC1Q9P281 2608 aa6.99□□□□□ -1.29
HNF4A-201ENST00000316099 ANK3Q12955 4377 aaKnown RBP6.97□□□□□ -1.29
HNF4A-201ENST00000316099 OCR1Q9BZK8 76 aa6.97□□□□□ -1.29
HNF4A-201ENST00000316099 Q96NJ1 140 aa6.97□□□□□ -1.29
HNF4A-201ENST00000316099 NSD1Q96L73 2696 aaPredicted RBP6.96□□□□□ -1.29
HNF4A-201ENST00000316099 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
HNF4A-201ENST00000316099 NBEAL2Q6ZNJ1 2754 aa6.96□□□□□ -1.3
HNF4A-201ENST00000316099 IGLV5-48A0A075B6I7 105 aa6.95□□□□□ -1.3
HNF4A-201ENST00000316099 TYMSOSQ8TAI1 123 aa6.95□□□□□ -1.3
HNF4A-201ENST00000316099 SSBP3-AS1Q7Z2R9 100 aa6.95□□□□□ -1.3
HNF4A-201ENST00000316099 Q5XG85 94 aa6.94□□□□□ -1.3
HNF4A-201ENST00000316099 ZNF469Q96JG9 3925 aaPredicted RBP6.94□□□□□ -1.3
HNF4A-201ENST00000316099 DSCR10P59022 87 aa6.92□□□□□ -1.3
HNF4A-201ENST00000316099 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
HNF4A-201ENST00000316099 IGLV5-37A0A075B6J1 123 aa6.91□□□□□ -1.3
HNF4A-201ENST00000316099 CASC10Q5T4H9 136 aa6.9□□□□□ -1.3
HNF4A-201ENST00000316099 APLNQ9ULZ1 77 aa6.89□□□□□ -1.31
HNF4A-201ENST00000316099 A0A0G2JQZ4 141 aa6.88□□□□□ -1.31
HNF4A-201ENST00000316099 A0A1W2PNN7 141 aa6.88□□□□□ -1.31
HNF4A-201ENST00000316099 STAB1Q9NY15 2570 aa6.88□□□□□ -1.31
HNF4A-201ENST00000316099 Q75L30 129 aa6.87□□□□□ -1.31
HNF4A-201ENST00000316099 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
HNF4A-201ENST00000316099 ZNF861PO60384 105 aa6.87□□□□□ -1.31
HNF4A-201ENST00000316099 COL6A5A8TX70 2615 aa6.87□□□□□ -1.31
HNF4A-201ENST00000316099 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
HNF4A-201ENST00000316099 CRIPTQ9P021 101 aa6.87□□□□□ -1.31
HNF4A-201ENST00000316099 OTOGQ6ZRI0 2925 aa6.86□□□□□ -1.31
HNF4A-201ENST00000316099 AKAP9Q99996 3911 aa6.85□□□□□ -1.31
HNF4A-201ENST00000316099 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
HNF4A-201ENST00000316099 CNBPP62633 177 aaKnown RBP6.83□□□□□ -1.32
HNF4A-201ENST00000316099 FP248Q71RG6 208 aaPredicted RBP6.83□□□□□ -1.32
HNF4A-201ENST00000316099 NIPBLQ6KC79 2804 aaeCLIP6.83□□□□□ -1.32
HNF4A-201ENST00000316099 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
HNF4A-201ENST00000316099 CYSTM1Q9H1C7 97 aa6.82□□□□□ -1.32
HNF4A-201ENST00000316099 RBM12B-AS1Q9P1G2 102 aa6.82□□□□□ -1.32
HNF4A-201ENST00000316099 ANAPC11Q9NYG5 84 aa6.82□□□□□ -1.32
HNF4A-201ENST00000316099 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
HNF4A-201ENST00000316099 MGAM2Q2M2H8 2515 aa6.81□□□□□ -1.32
HNF4A-201ENST00000316099 CUBNO60494 3623 aa6.81□□□□□ -1.32
HNF4A-201ENST00000316099 Q8NDZ9 215 aa6.79□□□□□ -1.32
HNF4A-201ENST00000316099 NOTCH1P46531 2555 aa6.79□□□□□ -1.32
HNF4A-201ENST00000316099 LINC01558Q9Y6Z2 57 aa6.78□□□□□ -1.32
HNF4A-201ENST00000316099 KRTAP26-1Q6PEX3 210 aa6.78□□□□□ -1.32
HNF4A-201ENST00000316099 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
HNF4A-201ENST00000316099 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
HNF4A-201ENST00000316099 IGLV7-43P04211 117 aa6.76□□□□□ -1.33
HNF4A-201ENST00000316099 A0A087WTM6 91 aa6.75□□□□□ -1.33
HNF4A-201ENST00000316099 PRR26Q8N8Z3 221 aa6.74□□□□□ -1.33
HNF4A-201ENST00000316099 PSORS1C2Q9UIG4 136 aa6.74□□□□□ -1.33
HNF4A-201ENST00000316099 KRTAP1-5Q9BYS1 174 aa6.73□□□□□ -1.33
HNF4A-201ENST00000316099 Q5VV11 94 aa6.72□□□□□ -1.33
HNF4A-201ENST00000316099 C9orf92A6NGG3 77 aa6.72□□□□□ -1.33
HNF4A-201ENST00000316099 OXTP01178 125 aa6.71□□□□□ -1.34
HNF4A-201ENST00000316099 LINC01554Q52M75 96 aa6.71□□□□□ -1.34
HNF4A-201ENST00000316099 TENM1Q9UKZ4 2725 aa6.71□□□□□ -1.34
HNF4A-201ENST00000316099 MMP24-AS1A0A0U1RRL7 71 aa6.7□□□□□ -1.34
HNF4A-201ENST00000316099 Q8N1X5 172 aa6.69□□□□□ -1.34
HNF4A-201ENST00000316099 HRES1P13985 223 aa6.68□□□□□ -1.34
HNF4A-201ENST00000316099 SPRR1AP35321 89 aa6.67□□□□□ -1.34
HNF4A-201ENST00000316099 TRRAPQ9Y4A5 3859 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms