RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 ROMO1P60602 79 aa12.6□□□□□ -0.39
KDM3B-201ENST00000314358 LINC00472Q9H8W2 130 aa12.6□□□□□ -0.39
KDM3B-201ENST00000314358 FLNBO75369 2602 aaKnown RBP12.6□□□□□ -0.39
KDM3B-201ENST00000314358 FLG2Q5D862 2391 aaPredicted RBP12.58□□□□□ -0.4
KDM3B-201ENST00000314358 H1FX-AS1Q4G0G2 97 aa12.58□□□□□ -0.4
KDM3B-201ENST00000314358 RPL37P61927 97 aaKnown RBP12.57□□□□□ -0.4
KDM3B-201ENST00000314358 Q5VSD8 79 aa12.57□□□□□ -0.4
KDM3B-201ENST00000314358 SPRR1AP35321 89 aa12.53□□□□□ -0.4
KDM3B-201ENST00000314358 ADM2Q7Z4H4 148 aa12.52□□□□□ -0.4
KDM3B-201ENST00000314358 KRTAP1-5Q9BYS1 174 aa12.52□□□□□ -0.41
KDM3B-201ENST00000314358 KRTAP26-1Q6PEX3 210 aa12.51□□□□□ -0.41
KDM3B-201ENST00000314358 OXTP01178 125 aa12.51□□□□□ -0.41
KDM3B-201ENST00000314358 ATRQ13535 2644 aa12.5□□□□□ -0.41
KDM3B-201ENST00000314358 SEC61BP60468 96 aaKnown RBP12.47□□□□□ -0.41
KDM3B-201ENST00000314358 KRTAP10-2P60368 255 aa12.46□□□□□ -0.42
KDM3B-201ENST00000314358 KRTAP10-1P60331 282 aa12.45□□□□□ -0.42
KDM3B-201ENST00000314358 FLNAP21333 2647 aaKnown RBP12.45□□□□□ -0.42
KDM3B-201ENST00000314358 PLAC4Q8WY50 150 aa12.42□□□□□ -0.42
KDM3B-201ENST00000314358 CHD7Q9P2D1 2997 aa12.41□□□□□ -0.42
KDM3B-201ENST00000314358 ITPR3Q14573 2671 aa12.37□□□□□ -0.43
KDM3B-201ENST00000314358 SPRR1BP22528 89 aa12.35□□□□□ -0.43
KDM3B-201ENST00000314358 Q6ZR54 194 aa12.35□□□□□ -0.43
KDM3B-201ENST00000314358 HELZ2Q9BYK8 2649 aaKnown RBP12.32□□□□□ -0.44
KDM3B-201ENST00000314358 MAST4O15021 2626 aa12.32□□□□□ -0.44
KDM3B-201ENST00000314358 PANO1I0J062 215 aa12.31□□□□□ -0.44
KDM3B-201ENST00000314358 LCE6AA0A183 80 aa12.31□□□□□ -0.44
KDM3B-201ENST00000314358 CFAP54Q96N23 3096 aa12.31□□□□□ -0.44
KDM3B-201ENST00000314358 PCNTO95613 3336 aa12.28□□□□□ -0.44
KDM3B-201ENST00000314358 CHD9Q3L8U1 2897 aa12.27□□□□□ -0.44
KDM3B-201ENST00000314358 A8MU10 97 aa12.24□□□□□ -0.45
KDM3B-201ENST00000314358 A0A087X002 238 aa12.23□□□□□ -0.45
KDM3B-201ENST00000314358 NOTCH2NLQ7Z3S9 236 aa12.23□□□□□ -0.45
KDM3B-201ENST00000314358 AKAP13Q12802 2813 aa12.23□□□□□ -0.45
KDM3B-201ENST00000314358 C20orf166-AS1Q96NR2 134 aa12.2□□□□□ -0.46
KDM3B-201ENST00000314358 HTTP42858 3142 aa12.12□□□□□ -0.47
KDM3B-201ENST00000314358 KRTAP16-1A8MUX0 517 aa12.12□□□□□ -0.47
KDM3B-201ENST00000314358 A0A0C4DFX4 3053 aa12.12□□□□□ -0.47
KDM3B-201ENST00000314358 CFAP46Q8IYW2 2715 aa12.12□□□□□ -0.47
KDM3B-201ENST00000314358 CHD6Q8TD26 2715 aa12.09□□□□□ -0.47
KDM3B-201ENST00000314358 DMBT1Q9UGM3 2413 aaPredicted RBP12.08□□□□□ -0.48
KDM3B-201ENST00000314358 NBEAL1Q6ZS30 2694 aa12.06□□□□□ -0.48
KDM3B-201ENST00000314358 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
KDM3B-201ENST00000314358 KRTAP29-1A8MX34 341 aaPredicted RBP12.05□□□□□ -0.48
KDM3B-201ENST00000314358 STAB1Q9NY15 2570 aa12.03□□□□□ -0.48
KDM3B-201ENST00000314358 A8MUU9 505 aa12.01□□□□□ -0.49
KDM3B-201ENST00000314358 KRTAP4-16G5E9R7 235 aaPredicted RBP12□□□□□ -0.49
KDM3B-201ENST00000314358 KRTAP25-1Q3LHN0 102 aa12□□□□□ -0.49
KDM3B-201ENST00000314358 KRTAP11-1Q8IUC1 163 aa11.99□□□□□ -0.49
KDM3B-201ENST00000314358 NDUFAF8A1L188 74 aa11.98□□□□□ -0.49
KDM3B-201ENST00000314358 FREM2Q5SZK8 3169 aa11.98□□□□□ -0.49
KDM3B-201ENST00000314358 LAMA2P24043 3122 aaKnown RBP11.97□□□□□ -0.49
KDM3B-201ENST00000314358 TEX15Q9BXT5 2789 aa11.93□□□□□ -0.5
KDM3B-201ENST00000314358 TRANK1O15050 2925 aa11.93□□□□□ -0.5
KDM3B-201ENST00000314358 RANBP2P49792 3224 aaKnown RBP11.91□□□□□ -0.5
KDM3B-201ENST00000314358 ZNF292O60281 2723 aa11.87□□□□□ -0.51
KDM3B-201ENST00000314358 CENPEQ02224 2701 aa11.86□□□□□ -0.51
KDM3B-201ENST00000314358 A6NN06 94 aa11.86□□□□□ -0.51
KDM3B-201ENST00000314358 C10orf95Q9H7T3 257 aa11.84□□□□□ -0.51
KDM3B-201ENST00000314358 MGAQ8IWI9 3026 aa11.82□□□□□ -0.52
KDM3B-201ENST00000314358 BRCA2P51587 3418 aa11.81□□□□□ -0.52
KDM3B-201ENST00000314358 LAMA3Q16787 3333 aa11.81□□□□□ -0.52
KDM3B-201ENST00000314358 ASB16-AS1Q495Z4 193 aa11.81□□□□□ -0.52
KDM3B-201ENST00000314358 STAB2Q8WWQ8 2551 aa11.8□□□□□ -0.52
KDM3B-201ENST00000314358 TRIOO75962 3097 aa11.79□□□□□ -0.52
KDM3B-201ENST00000314358 XIRP2A4UGR9 3374 aa11.77□□□□□ -0.53
KDM3B-201ENST00000314358 GCN1Q92616 2671 aaKnown RBP11.74□□□□□ -0.53
KDM3B-201ENST00000314358 CELSR3Q9NYQ7 3312 aa11.72□□□□□ -0.53
KDM3B-201ENST00000314358 TEP1Q99973 2627 aaKnown RBP11.7□□□□□ -0.54
KDM3B-201ENST00000314358 UNC79Q9P2D8 2635 aa11.69□□□□□ -0.54
KDM3B-201ENST00000314358 KRTAP13-2Q52LG2 175 aa11.68□□□□□ -0.54
KDM3B-201ENST00000314358 KRTAP7-1Q8IUC3 87 aa11.68□□□□□ -0.54
KDM3B-201ENST00000314358 NBEAL2Q6ZNJ1 2754 aa11.67□□□□□ -0.54
KDM3B-201ENST00000314358 NOTCH1P46531 2555 aa11.66□□□□□ -0.54
KDM3B-201ENST00000314358 Q6ZRN7 208 aaPredicted RBP11.64□□□□□ -0.55
KDM3B-201ENST00000314358 COL6A5A8TX70 2615 aa11.63□□□□□ -0.55
KDM3B-201ENST00000314358 WDFY4Q6ZS81 3184 aa11.63□□□□□ -0.55
KDM3B-201ENST00000314358 TNP1P09430 55 aa11.62□□□□□ -0.55
KDM3B-201ENST00000314358 IGSF10Q6WRI0 2623 aa11.62□□□□□ -0.55
KDM3B-201ENST00000314358 CDH23Q9H251 3354 aa11.59□□□□□ -0.55
KDM3B-201ENST00000314358 FRYQ5TBA9 3013 aa11.58□□□□□ -0.56
KDM3B-201ENST00000314358 PRUNE2Q8WUY3 3088 aa11.57□□□□□ -0.56
KDM3B-201ENST00000314358 SETXQ7Z333 2677 aaKnown RBP11.54□□□□□ -0.56
KDM3B-201ENST00000314358 A0A1B0GVY2 172 aa11.54□□□□□ -0.56
KDM3B-201ENST00000314358 BAHCC1Q9P281 2608 aa11.5□□□□□ -0.57
KDM3B-201ENST00000314358 UNC80Q8N2C7 3258 aa11.5□□□□□ -0.57
KDM3B-201ENST00000314358 DSPP15924 2871 aaKnown RBP11.49□□□□□ -0.57
KDM3B-201ENST00000314358 RPS29P62273 56 aaKnown RBP11.47□□□□□ -0.57
KDM3B-201ENST00000314358 KRTAP10-8P60410 259 aa11.46□□□□□ -0.58
KDM3B-201ENST00000314358 VPS13AQ96RL7 3174 aa11.45□□□□□ -0.58
KDM3B-201ENST00000314358 KRTAP21-3Q3LHN1 58 aa11.42□□□□□ -0.58
KDM3B-201ENST00000314358 MAP1AP78559 2803 aaPredicted RBP11.4□□□□□ -0.58
KDM3B-201ENST00000314358 DNAH14Q0VDD8 3507 aa11.38□□□□□ -0.59
KDM3B-201ENST00000314358 KRTAP13-1Q8IUC0 172 aa11.38□□□□□ -0.59
KDM3B-201ENST00000314358 KALRNO60229 2985 aa11.32□□□□□ -0.6
KDM3B-201ENST00000314358 REV3LO60673 3130 aa11.29□□□□□ -0.6
KDM3B-201ENST00000314358 SZT2Q5T011 3432 aa11.29□□□□□ -0.6
KDM3B-201ENST00000314358 NSD1Q96L73 2696 aaPredicted RBP11.24□□□□□ -0.61
KDM3B-201ENST00000314358 COL6A3P12111 3177 aa11.23□□□□□ -0.61
KDM3B-201ENST00000314358 DMXL2Q8TDJ6 3036 aa11.23□□□□□ -0.61
KDM3B-201ENST00000314358 ITPR2Q14571 2701 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms