RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 SPRR4Q96PI1 79 aa8.91□□□□□ -0.98
ZNF541-202ENST00000314121 UBR5O95071 2799 aaPredicted RBP8.91□□□□□ -0.98
ZNF541-202ENST00000314121 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.98
ZNF541-202ENST00000314121 NOTCH1P46531 2555 aa8.9□□□□□ -0.98
ZNF541-202ENST00000314121 LOC400499M0QZD8 3231 aa8.9□□□□□ -0.98
ZNF541-202ENST00000314121 LRBAP50851 2863 aa8.9□□□□□ -0.99
ZNF541-202ENST00000314121 STAB1Q9NY15 2570 aa8.9□□□□□ -0.99
ZNF541-202ENST00000314121 ZNF861PO60384 105 aa8.89□□□□□ -0.99
ZNF541-202ENST00000314121 NBEAL2Q6ZNJ1 2754 aa8.89□□□□□ -0.99
ZNF541-202ENST00000314121 KTN1-AS1Q86SY8 53 aa8.88□□□□□ -0.99
ZNF541-202ENST00000314121 SSBP3-AS1Q7Z2R9 100 aa8.88□□□□□ -0.99
ZNF541-202ENST00000314121 DSCR10P59022 87 aa8.88□□□□□ -0.99
ZNF541-202ENST00000314121 ITPR1Q14643 2758 aa8.87□□□□□ -0.99
ZNF541-202ENST00000314121 TYMSOSQ8TAI1 123 aa8.87□□□□□ -0.99
ZNF541-202ENST00000314121 SETXQ7Z333 2677 aaKnown RBP8.86□□□□□ -0.99
ZNF541-202ENST00000314121 DMXL1Q9Y485 3027 aa8.86□□□□□ -0.99
ZNF541-202ENST00000314121 COL6A5A8TX70 2615 aa8.86□□□□□ -0.99
ZNF541-202ENST00000314121 FP248Q71RG6 208 aaPredicted RBP8.84□□□□□ -0.99
ZNF541-202ENST00000314121 A0A087WTM6 91 aa8.82□□□□□ -1
ZNF541-202ENST00000314121 UQCR11O14957 56 aa8.82□□□□□ -1
ZNF541-202ENST00000314121 OXTP01178 125 aa8.82□□□□□ -1
ZNF541-202ENST00000314121 IGLV8-61A0A075B6I0 122 aa8.81□□□□□ -1
ZNF541-202ENST00000314121 Q96NJ1 140 aa8.81□□□□□ -1
ZNF541-202ENST00000314121 NBEAL1Q6ZS30 2694 aa8.8□□□□□ -1
ZNF541-202ENST00000314121 Q1T7F1 81 aa8.79□□□□□ -1
ZNF541-202ENST00000314121 TNRC18O15417 2968 aaPredicted RBP8.79□□□□□ -1
ZNF541-202ENST00000314121 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
ZNF541-202ENST00000314121 ANAPC11Q9NYG5 84 aa8.79□□□□□ -1
ZNF541-202ENST00000314121 SPRR1AP35321 89 aa8.78□□□□□ -1
ZNF541-202ENST00000314121 PLA2G1BP04054 148 aaKnown RBP8.78□□□□□ -1
ZNF541-202ENST00000314121 APLNQ9ULZ1 77 aa8.77□□□□□ -1
ZNF541-202ENST00000314121 LCA10Q71F78 164 aa8.77□□□□□ -1.01
ZNF541-202ENST00000314121 USP34Q70CQ2 3546 aa8.76□□□□□ -1.01
ZNF541-202ENST00000314121 FAM229BQ4G0N7 80 aa8.76□□□□□ -1.01
ZNF541-202ENST00000314121 ASH1LQ9NR48 2969 aaKnown RBP8.76□□□□□ -1.01
ZNF541-202ENST00000314121 IGLV7-43P04211 117 aa8.73□□□□□ -1.01
ZNF541-202ENST00000314121 MIR22HGQ0VDD5 57 aa8.71□□□□□ -1.01
ZNF541-202ENST00000314121 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
ZNF541-202ENST00000314121 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
ZNF541-202ENST00000314121 ZANQ9Y493 2812 aa8.69□□□□□ -1.02
ZNF541-202ENST00000314121 WWC2-AS2Q96NR7 200 aa8.69□□□□□ -1.02
ZNF541-202ENST00000314121 RBM12B-AS1Q9P1G2 102 aa8.69□□□□□ -1.02
ZNF541-202ENST00000314121 KRTAP26-1Q6PEX3 210 aa8.67□□□□□ -1.02
ZNF541-202ENST00000314121 ITPR2Q14571 2701 aa8.67□□□□□ -1.02
ZNF541-202ENST00000314121 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
ZNF541-202ENST00000314121 UTP20O75691 2785 aaKnown RBP8.66□□□□□ -1.02
ZNF541-202ENST00000314121 NSD1Q96L73 2696 aaPredicted RBP8.64□□□□□ -1.03
ZNF541-202ENST00000314121 LINC00304Q8N9R0 145 aa8.63□□□□□ -1.03
ZNF541-202ENST00000314121 MMP24-AS1A0A0U1RRL7 71 aa8.63□□□□□ -1.03
ZNF541-202ENST00000314121 WDFY3Q8IZQ1 3526 aa8.63□□□□□ -1.03
ZNF541-202ENST00000314121 SPRR1BP22528 89 aa8.63□□□□□ -1.03
ZNF541-202ENST00000314121 Q8N9P0 234 aaPredicted RBP8.62□□□□□ -1.03
ZNF541-202ENST00000314121 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
ZNF541-202ENST00000314121 LINC00472Q9H8W2 130 aa8.6□□□□□ -1.03
ZNF541-202ENST00000314121 TNP2Q05952 138 aa8.59□□□□□ -1.03
ZNF541-202ENST00000314121 Q75L30 129 aa8.58□□□□□ -1.04
ZNF541-202ENST00000314121 CELSR2Q9HCU4 2923 aa8.56□□□□□ -1.04
ZNF541-202ENST00000314121 SPINT4Q6UDR6 99 aa8.56□□□□□ -1.04
ZNF541-202ENST00000314121 MUC3AQ02505 3323 aa8.56□□□□□ -1.04
ZNF541-202ENST00000314121 LINC01558Q9Y6Z2 57 aa8.55□□□□□ -1.04
ZNF541-202ENST00000314121 BAHCC1Q9P281 2608 aa8.54□□□□□ -1.04
ZNF541-202ENST00000314121 KRTAP4-16G5E9R7 235 aaPredicted RBP8.53□□□□□ -1.04
ZNF541-202ENST00000314121 HRES1P13985 223 aa8.53□□□□□ -1.04
ZNF541-202ENST00000314121 Q5VV11 94 aa8.53□□□□□ -1.04
ZNF541-202ENST00000314121 C9orf92A6NGG3 77 aa8.52□□□□□ -1.05
ZNF541-202ENST00000314121 NF1P21359 2839 aa8.51□□□□□ -1.05
ZNF541-202ENST00000314121 DCHS1Q96JQ0 3298 aa8.51□□□□□ -1.05
ZNF541-202ENST00000314121 CRYBG3Q68DQ2 2970 aa8.51□□□□□ -1.05
ZNF541-202ENST00000314121 Q8N1X5 172 aa8.51□□□□□ -1.05
ZNF541-202ENST00000314121 KRTAP1-5Q9BYS1 174 aa8.5□□□□□ -1.05
ZNF541-202ENST00000314121 STAB2Q8WWQ8 2551 aa8.5□□□□□ -1.05
ZNF541-202ENST00000314121 ASPMQ8IZT6 3477 aa8.49□□□□□ -1.05
ZNF541-202ENST00000314121 PLAC8Q9NZF1 115 aa8.48□□□□□ -1.05
ZNF541-202ENST00000314121 PRAC1Q96KF2 57 aa8.47□□□□□ -1.05
ZNF541-202ENST00000314121 SMR3BP02814 79 aaPredicted RBP8.46□□□□□ -1.05
ZNF541-202ENST00000314121 H3BS24 57 aa8.46□□□□□ -1.06
ZNF541-202ENST00000314121 LINC01554Q52M75 96 aa8.46□□□□□ -1.06
ZNF541-202ENST00000314121 RELNP78509 3460 aa8.45□□□□□ -1.06
ZNF541-202ENST00000314121 FBN2P35556 2912 aa8.45□□□□□ -1.06
ZNF541-202ENST00000314121 APCP25054 2843 aa8.44□□□□□ -1.06
ZNF541-202ENST00000314121 HRNRQ86YZ3 2850 aaPredicted RBP8.43□□□□□ -1.06
ZNF541-202ENST00000314121 HIVEP1P15822 2718 aa8.43□□□□□ -1.06
ZNF541-202ENST00000314121 ZCCHC13Q8WW36 166 aaKnown RBP8.42□□□□□ -1.06
ZNF541-202ENST00000314121 DCHS2Q6V1P9 2916 aa8.42□□□□□ -1.06
ZNF541-202ENST00000314121 KRTAP29-1A8MX34 341 aaPredicted RBP8.41□□□□□ -1.06
ZNF541-202ENST00000314121 NIPBLQ6KC79 2804 aaeCLIP8.41□□□□□ -1.06
ZNF541-202ENST00000314121 LAMA5O15230 3695 aa8.41□□□□□ -1.06
ZNF541-202ENST00000314121 CRIPTQ9P021 101 aa8.39□□□□□ -1.07
ZNF541-202ENST00000314121 Q5W150 140 aa8.38□□□□□ -1.07
ZNF541-202ENST00000314121 SPINK7P58062 85 aa8.38□□□□□ -1.07
ZNF541-202ENST00000314121 A0A1B0GU33 70 aa8.33□□□□□ -1.08
ZNF541-202ENST00000314121 Q6ZR54 194 aa8.33□□□□□ -1.08
ZNF541-202ENST00000314121 ZFHX4Q86UP3 3567 aa8.33□□□□□ -1.08
ZNF541-202ENST00000314121 DMDP11532 3685 aa8.32□□□□□ -1.08
ZNF541-202ENST00000314121 LINC00483Q53H64 154 aa8.32□□□□□ -1.08
ZNF541-202ENST00000314121 KMT2BQ9UMN6 2715 aaPredicted RBP8.3□□□□□ -1.08
ZNF541-202ENST00000314121 LCE6AA0A183 80 aa8.3□□□□□ -1.08
ZNF541-202ENST00000314121 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
ZNF541-202ENST00000314121 A0A0D9SG42 100 aa8.28□□□□□ -1.08
ZNF541-202ENST00000314121 PANO1I0J062 215 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms