RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 KRTAP1-1Q07627 177 aa8.38□□□□□ -1.07
CLCN6-201ENST00000312413 FLG2Q5D862 2391 aaPredicted RBP8.36□□□□□ -1.07
CLCN6-201ENST00000312413 S4R3F8 94 aa8.35□□□□□ -1.07
CLCN6-201ENST00000312413 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
CLCN6-201ENST00000312413 M0R2T5 61 aa8.33□□□□□ -1.08
CLCN6-201ENST00000312413 FLNAP21333 2647 aaKnown RBP8.3□□□□□ -1.08
CLCN6-201ENST00000312413 RPL37P61927 97 aaKnown RBP8.3□□□□□ -1.08
CLCN6-201ENST00000312413 ROMO1P60602 79 aa8.28□□□□□ -1.08
CLCN6-201ENST00000312413 R4GN34 69 aa8.26□□□□□ -1.09
CLCN6-201ENST00000312413 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
CLCN6-201ENST00000312413 STAB1Q9NY15 2570 aa8.25□□□□□ -1.09
CLCN6-201ENST00000312413 ASB16-AS1Q495Z4 193 aa8.24□□□□□ -1.09
CLCN6-201ENST00000312413 C5orf42Q9H799 3197 aa8.23□□□□□ -1.09
CLCN6-201ENST00000312413 ITPR3Q14573 2671 aa8.22□□□□□ -1.09
CLCN6-201ENST00000312413 H1FX-AS1Q4G0G2 97 aa8.21□□□□□ -1.09
CLCN6-201ENST00000312413 AKAP13Q12802 2813 aa8.21□□□□□ -1.1
CLCN6-201ENST00000312413 Q6ZR54 194 aa8.2□□□□□ -1.1
CLCN6-201ENST00000312413 A0A0C4DFX4 3053 aa8.18□□□□□ -1.1
CLCN6-201ENST00000312413 KRTAP29-1A8MX34 341 aaPredicted RBP8.16□□□□□ -1.1
CLCN6-201ENST00000312413 NBEAL1Q6ZS30 2694 aa8.15□□□□□ -1.1
CLCN6-201ENST00000312413 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
CLCN6-201ENST00000312413 KRTAP1-5Q9BYS1 174 aa8.12□□□□□ -1.11
CLCN6-201ENST00000312413 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
CLCN6-201ENST00000312413 KRTAP4-16G5E9R7 235 aaPredicted RBP8.1□□□□□ -1.11
CLCN6-201ENST00000312413 M0QZ58 72 aa8.1□□□□□ -1.11
CLCN6-201ENST00000312413 SPATA8Q6RVD6 105 aa8.09□□□□□ -1.11
CLCN6-201ENST00000312413 CHD6Q8TD26 2715 aa8.09□□□□□ -1.11
CLCN6-201ENST00000312413 HELZ2Q9BYK8 2649 aaKnown RBP8.06□□□□□ -1.12
CLCN6-201ENST00000312413 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
CLCN6-201ENST00000312413 A6NN06 94 aa8.03□□□□□ -1.12
CLCN6-201ENST00000312413 NOTCH1P46531 2555 aa8.02□□□□□ -1.13
CLCN6-201ENST00000312413 CENPEQ02224 2701 aa8.02□□□□□ -1.13
CLCN6-201ENST00000312413 CHD7Q9P2D1 2997 aa8.01□□□□□ -1.13
CLCN6-201ENST00000312413 UNC79Q9P2D8 2635 aa8.01□□□□□ -1.13
CLCN6-201ENST00000312413 CFAP54Q96N23 3096 aa8□□□□□ -1.13
CLCN6-201ENST00000312413 CFAP46Q8IYW2 2715 aa8□□□□□ -1.13
CLCN6-201ENST00000312413 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
CLCN6-201ENST00000312413 PANO1I0J062 215 aa7.98□□□□□ -1.13
CLCN6-201ENST00000312413 KRTAP25-1Q3LHN0 102 aa7.98□□□□□ -1.13
CLCN6-201ENST00000312413 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
CLCN6-201ENST00000312413 STAB2Q8WWQ8 2551 aa7.97□□□□□ -1.13
CLCN6-201ENST00000312413 PLAC4Q8WY50 150 aa7.96□□□□□ -1.14
CLCN6-201ENST00000312413 A0A087X002 238 aa7.95□□□□□ -1.14
CLCN6-201ENST00000312413 NOTCH2NLQ7Z3S9 236 aa7.95□□□□□ -1.14
CLCN6-201ENST00000312413 GCN1Q92616 2671 aaKnown RBP7.95□□□□□ -1.14
CLCN6-201ENST00000312413 LCE6AA0A183 80 aa7.93□□□□□ -1.14
CLCN6-201ENST00000312413 MKI67P46013 3256 aaKnown RBP7.93□□□□□ -1.14
CLCN6-201ENST00000312413 KRTAP10-2P60368 255 aa7.93□□□□□ -1.14
CLCN6-201ENST00000312413 LAMA2P24043 3122 aaKnown RBP7.92□□□□□ -1.14
CLCN6-201ENST00000312413 TEX15Q9BXT5 2789 aa7.92□□□□□ -1.14
CLCN6-201ENST00000312413 Q5VSD8 79 aa7.92□□□□□ -1.14
CLCN6-201ENST00000312413 TEP1Q99973 2627 aaKnown RBP7.91□□□□□ -1.14
CLCN6-201ENST00000312413 A8MU10 97 aa7.88□□□□□ -1.15
CLCN6-201ENST00000312413 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
CLCN6-201ENST00000312413 NDUFAF8A1L188 74 aa7.87□□□□□ -1.15
CLCN6-201ENST00000312413 BRCA2P51587 3418 aa7.86□□□□□ -1.15
CLCN6-201ENST00000312413 HTTP42858 3142 aa7.84□□□□□ -1.15
CLCN6-201ENST00000312413 COL6A5A8TX70 2615 aa7.84□□□□□ -1.15
CLCN6-201ENST00000312413 RANBP2P49792 3224 aaKnown RBP7.83□□□□□ -1.16
CLCN6-201ENST00000312413 LAMA3Q16787 3333 aa7.82□□□□□ -1.16
CLCN6-201ENST00000312413 KRTAP11-1Q8IUC1 163 aa7.78□□□□□ -1.16
CLCN6-201ENST00000312413 CHD9Q3L8U1 2897 aa7.78□□□□□ -1.16
CLCN6-201ENST00000312413 NBEAL2Q6ZNJ1 2754 aa7.77□□□□□ -1.17
CLCN6-201ENST00000312413 UNC80Q8N2C7 3258 aa7.76□□□□□ -1.17
CLCN6-201ENST00000312413 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
CLCN6-201ENST00000312413 SETXQ7Z333 2677 aaKnown RBP7.75□□□□□ -1.17
CLCN6-201ENST00000312413 A8MUU9 505 aa7.74□□□□□ -1.17
CLCN6-201ENST00000312413 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
CLCN6-201ENST00000312413 TRIOO75962 3097 aa7.72□□□□□ -1.17
CLCN6-201ENST00000312413 KRTAP21-3Q3LHN1 58 aa7.72□□□□□ -1.17
CLCN6-201ENST00000312413 XIRP2A4UGR9 3374 aa7.7□□□□□ -1.18
CLCN6-201ENST00000312413 ZNF292O60281 2723 aa7.69□□□□□ -1.18
CLCN6-201ENST00000312413 FREM2Q5SZK8 3169 aa7.68□□□□□ -1.18
CLCN6-201ENST00000312413 BAHCC1Q9P281 2608 aa7.68□□□□□ -1.18
CLCN6-201ENST00000312413 MGAQ8IWI9 3026 aa7.66□□□□□ -1.18
CLCN6-201ENST00000312413 KRTAP13-1Q8IUC0 172 aa7.65□□□□□ -1.18
CLCN6-201ENST00000312413 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
CLCN6-201ENST00000312413 Q6ZRN7 208 aaPredicted RBP7.64□□□□□ -1.19
CLCN6-201ENST00000312413 PRUNE2Q8WUY3 3088 aa7.64□□□□□ -1.19
CLCN6-201ENST00000312413 WDFY4Q6ZS81 3184 aa7.63□□□□□ -1.19
CLCN6-201ENST00000312413 C10orf95Q9H7T3 257 aa7.62□□□□□ -1.19
CLCN6-201ENST00000312413 UBR5O95071 2799 aaPredicted RBP7.62□□□□□ -1.19
CLCN6-201ENST00000312413 CELSR3Q9NYQ7 3312 aa7.62□□□□□ -1.19
CLCN6-201ENST00000312413 NSD1Q96L73 2696 aaPredicted RBP7.59□□□□□ -1.19
CLCN6-201ENST00000312413 VPS13AQ96RL7 3174 aa7.59□□□□□ -1.2
CLCN6-201ENST00000312413 CDH23Q9H251 3354 aa7.59□□□□□ -1.2
CLCN6-201ENST00000312413 DNAH14Q0VDD8 3507 aa7.58□□□□□ -1.2
CLCN6-201ENST00000312413 MAP1AP78559 2803 aaPredicted RBP7.58□□□□□ -1.2
CLCN6-201ENST00000312413 TRANK1O15050 2925 aa7.57□□□□□ -1.2
CLCN6-201ENST00000312413 TNP1P09430 55 aa7.56□□□□□ -1.2
CLCN6-201ENST00000312413 FRYQ5TBA9 3013 aa7.53□□□□□ -1.2
CLCN6-201ENST00000312413 IGSF10Q6WRI0 2623 aa7.5□□□□□ -1.21
CLCN6-201ENST00000312413 VCANP13611 3396 aa7.47□□□□□ -1.21
CLCN6-201ENST00000312413 DSPP15924 2871 aaKnown RBP7.44□□□□□ -1.22
CLCN6-201ENST00000312413 PP632Q6XCG6 107 aa7.43□□□□□ -1.22
CLCN6-201ENST00000312413 ITPR1Q14643 2758 aa7.42□□□□□ -1.22
CLCN6-201ENST00000312413 NBEAQ8NFP9 2946 aa7.42□□□□□ -1.22
CLCN6-201ENST00000312413 LAMA1P25391 3075 aa7.4□□□□□ -1.22
CLCN6-201ENST00000312413 KALRNO60229 2985 aa7.38□□□□□ -1.23
CLCN6-201ENST00000312413 ITPR2Q14571 2701 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms