RNA–Protein interactions for RNA: ENST00000311659.4

UBQLN3-201, Transcript of ubiquilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN3, Length 2,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-201ENST00000311659 LINC00476Q8WZB0 136 aa5.39□□□□□ -1.55
UBQLN3-201ENST00000311659 CASC10Q5T4H9 136 aa5.38□□□□□ -1.55
UBQLN3-201ENST00000311659 MRPL55Q7Z7F7 128 aaKnown RBP5.38□□□□□ -1.55
UBQLN3-201ENST00000311659 DEFB131BA0A096LNP1 70 aa5.38□□□□□ -1.55
UBQLN3-201ENST00000311659 LRCOL1A6NCL2 159 aa5.38□□□□□ -1.55
UBQLN3-201ENST00000311659 PSCAO43653 123 aa5.38□□□□□ -1.55
UBQLN3-201ENST00000311659 UBE2BP63146 152 aa5.37□□□□□ -1.55
UBQLN3-201ENST00000311659 IGFL1Q6UW32 110 aa5.37□□□□□ -1.55
UBQLN3-201ENST00000311659 A0A0G2JQZ4 141 aa5.36□□□□□ -1.55
UBQLN3-201ENST00000311659 A0A1W2PNN7 141 aa5.36□□□□□ -1.55
UBQLN3-201ENST00000311659 REG3GQ6UW15 175 aa5.36□□□□□ -1.55
UBQLN3-201ENST00000311659 IGLV8-61A0A075B6I0 122 aa5.35□□□□□ -1.55
UBQLN3-201ENST00000311659 DNAH1Q9P2D7 4330 aa5.35□□□□□ -1.55
UBQLN3-201ENST00000311659 TRAV22A0A0B4J277 110 aa5.35□□□□□ -1.55
UBQLN3-201ENST00000311659 NDUFB1O75438 58 aa5.35□□□□□ -1.55
UBQLN3-201ENST00000311659 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.55
UBQLN3-201ENST00000311659 C11orf45Q8TAV5 145 aa5.34□□□□□ -1.55
UBQLN3-201ENST00000311659 PRR4Q16378 134 aa5.34□□□□□ -1.56
UBQLN3-201ENST00000311659 B9D2Q9BPU9 175 aa5.34□□□□□ -1.56
UBQLN3-201ENST00000311659 DEFB116Q30KQ4 102 aa5.33□□□□□ -1.56
UBQLN3-201ENST00000311659 WFDC13Q8IUB5 93 aa5.33□□□□□ -1.56
UBQLN3-201ENST00000311659 LINC00588Q9Y4M8 146 aa5.33□□□□□ -1.56
UBQLN3-201ENST00000311659 A0A087WSZ3 146 aa5.32□□□□□ -1.56
UBQLN3-201ENST00000311659 PSPHP1O15172 72 aa5.32□□□□□ -1.56
UBQLN3-201ENST00000311659 MP68P56378 58 aa5.31□□□□□ -1.56
UBQLN3-201ENST00000311659 HUWE1Q7Z6Z7 4374 aaKnown RBP5.31□□□□□ -1.56
UBQLN3-201ENST00000311659 PRLHP81277 87 aa5.31□□□□□ -1.56
UBQLN3-201ENST00000311659 SPANXA2-OT1Q8N9U9 137 aa5.31□□□□□ -1.56
UBQLN3-201ENST00000311659 RBM12B-AS1Q9P1G2 102 aa5.31□□□□□ -1.56
UBQLN3-201ENST00000311659 RPL37AP61513 92 aaKnown RBP5.3□□□□□ -1.56
UBQLN3-201ENST00000311659 KTN1-AS1Q86SY8 53 aa5.3□□□□□ -1.56
UBQLN3-201ENST00000311659 LINC00208Q96KT6 92 aa5.3□□□□□ -1.56
UBQLN3-201ENST00000311659 A0A096LNI7 61 aa5.28□□□□□ -1.56
UBQLN3-201ENST00000311659 A8MUN3 132 aa5.28□□□□□ -1.56
UBQLN3-201ENST00000311659 H3BPC8 53 aa5.28□□□□□ -1.56
UBQLN3-201ENST00000311659 CNBPP62633 177 aaKnown RBP5.28□□□□□ -1.56
UBQLN3-201ENST00000311659 COL7A1Q02388 2944 aa5.28□□□□□ -1.56
UBQLN3-201ENST00000311659 Q5VV11 94 aa5.28□□□□□ -1.56
UBQLN3-201ENST00000311659 H0Y9P7 68 aa5.27□□□□□ -1.57
UBQLN3-201ENST00000311659 CASC2Q6XLA1 102 aa5.27□□□□□ -1.57
UBQLN3-201ENST00000311659 DNAH9Q9NYC9 4486 aa5.27□□□□□ -1.57
UBQLN3-201ENST00000311659 C16orf90A8MZG2 172 aa5.27□□□□□ -1.57
UBQLN3-201ENST00000311659 SPRR1BP22528 89 aa5.27□□□□□ -1.57
UBQLN3-201ENST00000311659 C9orf163Q8N9P6 203 aa5.27□□□□□ -1.57
UBQLN3-201ENST00000311659 LINC00472Q9H8W2 130 aa5.27□□□□□ -1.57
UBQLN3-201ENST00000311659 A8MWP4 228 aa5.26□□□□□ -1.57
UBQLN3-201ENST00000311659 H3BS24 57 aa5.26□□□□□ -1.57
UBQLN3-201ENST00000311659 Q8N9P0 234 aaPredicted RBP5.26□□□□□ -1.57
UBQLN3-201ENST00000311659 UBE2AP49459 152 aa5.25□□□□□ -1.57
UBQLN3-201ENST00000311659 MEGF8Q7Z7M0 2845 aa5.25□□□□□ -1.57
UBQLN3-201ENST00000311659 KRTAP11-1Q8IUC1 163 aa5.25□□□□□ -1.57
UBQLN3-201ENST00000311659 PRKDCP78527 4128 aaKnown RBP5.24□□□□□ -1.57
UBQLN3-201ENST00000311659 IGKV2-24A0A0C4DH68 120 aa5.24□□□□□ -1.57
UBQLN3-201ENST00000311659 A8MU10 97 aa5.24□□□□□ -1.57
UBQLN3-201ENST00000311659 H0Y9J4 135 aa5.24□□□□□ -1.57
UBQLN3-201ENST00000311659 STAB2Q8WWQ8 2551 aa5.23□□□□□ -1.57
UBQLN3-201ENST00000311659 MMP24-AS1A0A0U1RRL7 71 aa5.23□□□□□ -1.57
UBQLN3-201ENST00000311659 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
UBQLN3-201ENST00000311659 KRTAP1-5Q9BYS1 174 aa5.22□□□□□ -1.57
UBQLN3-201ENST00000311659 NDUFS5O43920 106 aa5.22□□□□□ -1.57
UBQLN3-201ENST00000311659 SRRM2Q9UQ35 2752 aaKnown RBP5.21□□□□□ -1.57
UBQLN3-201ENST00000311659 TENM2Q9NT68 2774 aa5.21□□□□□ -1.58
UBQLN3-201ENST00000311659 DNAH10Q8IVF4 4471 aa5.21□□□□□ -1.58
UBQLN3-201ENST00000311659 PHF5AQ7RTV0 110 aaKnown RBP5.21□□□□□ -1.58
UBQLN3-201ENST00000311659 IGLV7-46A0A075B6I9 117 aa5.2□□□□□ -1.58
UBQLN3-201ENST00000311659 ASB16-AS1Q495Z4 193 aa5.2□□□□□ -1.58
UBQLN3-201ENST00000311659 LOC101927531A0A1B0GV80 90 aa5.19□□□□□ -1.58
UBQLN3-201ENST00000311659 NUPR2A6NF83 97 aa5.19□□□□□ -1.58
UBQLN3-201ENST00000311659 CHTF8P0CG12 524 aa5.19□□□□□ -1.58
UBQLN3-201ENST00000311659 PRR15LQ9BU68 103 aa5.19□□□□□ -1.58
UBQLN3-201ENST00000311659 CHKB-CPT1BH3BT56 60 aa5.18□□□□□ -1.58
UBQLN3-201ENST00000311659 COA5Q86WW8 74 aa5.18□□□□□ -1.58
UBQLN3-201ENST00000311659 Q75L30 129 aa5.18□□□□□ -1.58
UBQLN3-201ENST00000311659 Q96NJ1 140 aa5.18□□□□□ -1.58
UBQLN3-201ENST00000311659 KRTAP13-1Q8IUC0 172 aa5.17□□□□□ -1.58
UBQLN3-201ENST00000311659 APLNQ9ULZ1 77 aa5.17□□□□□ -1.58
UBQLN3-201ENST00000311659 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
UBQLN3-201ENST00000311659 A6NN06 94 aa5.16□□□□□ -1.58
UBQLN3-201ENST00000311659 LCA10Q71F78 164 aa5.16□□□□□ -1.58
UBQLN3-201ENST00000311659 LCE2DQ5TA82 110 aaPredicted RBP5.16□□□□□ -1.58
UBQLN3-201ENST00000311659 C8orf87E5RJ46 101 aa5.15□□□□□ -1.58
UBQLN3-201ENST00000311659 Q6ZR54 194 aa5.15□□□□□ -1.58
UBQLN3-201ENST00000311659 LYSTQ99698 3801 aa5.15□□□□□ -1.58
UBQLN3-201ENST00000311659 PLAC8Q9NZF1 115 aa5.15□□□□□ -1.58
UBQLN3-201ENST00000311659 MOBPQ13875 183 aa5.15□□□□□ -1.59
UBQLN3-201ENST00000311659 TP53AIP1Q9HCN2 124 aa5.15□□□□□ -1.59
UBQLN3-201ENST00000311659 UBE2DNLQ8IWF7 75 aa5.14□□□□□ -1.59
UBQLN3-201ENST00000311659 CSMD3Q7Z407 3707 aa5.14□□□□□ -1.59
UBQLN3-201ENST00000311659 PRR26Q8N8Z3 221 aa5.14□□□□□ -1.59
UBQLN3-201ENST00000311659 KRTAP3-3Q9BYR6 98 aa5.14□□□□□ -1.59
UBQLN3-201ENST00000311659 KRTAP3-2Q9BYR7 98 aa5.14□□□□□ -1.59
UBQLN3-201ENST00000311659 C14orf177Q52M58 125 aa5.13□□□□□ -1.59
UBQLN3-201ENST00000311659 PCOTHQ58A44 107 aa5.13□□□□□ -1.59
UBQLN3-201ENST00000311659 C7orf65Q6ZTY9 151 aa5.13□□□□□ -1.59
UBQLN3-201ENST00000311659 BIRC6Q9NR09 4857 aa5.13□□□□□ -1.59
UBQLN3-201ENST00000311659 SPTSSBQ8NFR3 76 aa5.13□□□□□ -1.59
UBQLN3-201ENST00000311659 C8orf17Q9NRJ1 99 aa5.13□□□□□ -1.59
UBQLN3-201ENST00000311659 PANO1I0J062 215 aa5.12□□□□□ -1.59
UBQLN3-201ENST00000311659 LINC01558Q9Y6Z2 57 aa5.12□□□□□ -1.59
UBQLN3-201ENST00000311659 WWC2-AS2Q96NR7 200 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms