RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 NBEAL2Q6ZNJ1 2754 aa11.29□□□□□ -0.6
ATP2A3-201ENST00000309890 MIR22HGQ0VDD5 57 aa11.28□□□□□ -0.6
ATP2A3-201ENST00000309890 KTN1-AS1Q86SY8 53 aa11.27□□□□□ -0.61
ATP2A3-201ENST00000309890 UBR5O95071 2799 aaPredicted RBP11.26□□□□□ -0.61
ATP2A3-201ENST00000309890 CELSR3Q9NYQ7 3312 aa11.26□□□□□ -0.61
ATP2A3-201ENST00000309890 FP248Q71RG6 208 aaPredicted RBP11.24□□□□□ -0.61
ATP2A3-201ENST00000309890 CDC42SE1Q9NRR8 79 aa11.23□□□□□ -0.61
ATP2A3-201ENST00000309890 IGSF10Q6WRI0 2623 aa11.23□□□□□ -0.61
ATP2A3-201ENST00000309890 IGLV7-46A0A075B6I9 117 aa11.22□□□□□ -0.61
ATP2A3-201ENST00000309890 LINC00304Q8N9R0 145 aa11.21□□□□□ -0.61
ATP2A3-201ENST00000309890 KALRNO60229 2985 aa11.21□□□□□ -0.61
ATP2A3-201ENST00000309890 FREM2Q5SZK8 3169 aa11.2□□□□□ -0.62
ATP2A3-201ENST00000309890 VCANP13611 3396 aa11.2□□□□□ -0.62
ATP2A3-201ENST00000309890 KRTAP26-1Q6PEX3 210 aa11.18□□□□□ -0.62
ATP2A3-201ENST00000309890 PRR26Q8N8Z3 221 aa11.18□□□□□ -0.62
ATP2A3-201ENST00000309890 FAM229BQ4G0N7 80 aa11.17□□□□□ -0.62
ATP2A3-201ENST00000309890 MMP24-AS1A0A0U1RRL7 71 aa11.15□□□□□ -0.62
ATP2A3-201ENST00000309890 SPRR1BP22528 89 aa11.14□□□□□ -0.63
ATP2A3-201ENST00000309890 BAHCC1Q9P281 2608 aa11.13□□□□□ -0.63
ATP2A3-201ENST00000309890 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.13□□□□□ -0.63
ATP2A3-201ENST00000309890 LCA10Q71F78 164 aa11.13□□□□□ -0.63
ATP2A3-201ENST00000309890 SZT2Q5T011 3432 aa11.13□□□□□ -0.63
ATP2A3-201ENST00000309890 OXTP01178 125 aa11.12□□□□□ -0.63
ATP2A3-201ENST00000309890 ADGRG4Q8IZF6 3080 aa11.12□□□□□ -0.63
ATP2A3-201ENST00000309890 Q8N9P0 234 aaPredicted RBP11.11□□□□□ -0.63
ATP2A3-201ENST00000309890 FLNCQ14315 2725 aa11.11□□□□□ -0.63
ATP2A3-201ENST00000309890 LINC00472Q9H8W2 130 aa11.1□□□□□ -0.63
ATP2A3-201ENST00000309890 DNAH14Q0VDD8 3507 aa11.1□□□□□ -0.63
ATP2A3-201ENST00000309890 Q75L30 129 aa11.09□□□□□ -0.63
ATP2A3-201ENST00000309890 NSD1Q96L73 2696 aaPredicted RBP11.08□□□□□ -0.64
ATP2A3-201ENST00000309890 TNP2Q05952 138 aa11.07□□□□□ -0.64
ATP2A3-201ENST00000309890 C9orf92A6NGG3 77 aa11.05□□□□□ -0.64
ATP2A3-201ENST00000309890 ATMQ13315 3056 aa11.05□□□□□ -0.64
ATP2A3-201ENST00000309890 LINC01558Q9Y6Z2 57 aa11.04□□□□□ -0.64
ATP2A3-201ENST00000309890 FRYLO94915 3013 aa11.03□□□□□ -0.64
ATP2A3-201ENST00000309890 HRES1P13985 223 aa11.02□□□□□ -0.64
ATP2A3-201ENST00000309890 BOD1L1Q8NFC6 3051 aa11.02□□□□□ -0.64
ATP2A3-201ENST00000309890 Q8N1X5 172 aa11.02□□□□□ -0.65
ATP2A3-201ENST00000309890 ITPR1Q14643 2758 aa11.01□□□□□ -0.65
ATP2A3-201ENST00000309890 TACC2O95359 2948 aa10.99□□□□□ -0.65
ATP2A3-201ENST00000309890 KRTAP4-16G5E9R7 235 aaPredicted RBP10.99□□□□□ -0.65
ATP2A3-201ENST00000309890 PLAC8Q9NZF1 115 aa10.98□□□□□ -0.65
ATP2A3-201ENST00000309890 SMR3BP02814 79 aaPredicted RBP10.98□□□□□ -0.65
ATP2A3-201ENST00000309890 KRTAP1-5Q9BYS1 174 aa10.97□□□□□ -0.65
ATP2A3-201ENST00000309890 SPINT4Q6UDR6 99 aa10.97□□□□□ -0.65
ATP2A3-201ENST00000309890 Q5VV11 94 aa10.96□□□□□ -0.66
ATP2A3-201ENST00000309890 LRBAP50851 2863 aa10.94□□□□□ -0.66
ATP2A3-201ENST00000309890 REV3LO60673 3130 aa10.93□□□□□ -0.66
ATP2A3-201ENST00000309890 STAB2Q8WWQ8 2551 aa10.93□□□□□ -0.66
ATP2A3-201ENST00000309890 COL12A1Q99715 3063 aa10.92□□□□□ -0.66
ATP2A3-201ENST00000309890 FLG2Q5D862 2391 aaPredicted RBP10.91□□□□□ -0.66
ATP2A3-201ENST00000309890 DMXL2Q8TDJ6 3036 aa10.89□□□□□ -0.67
ATP2A3-201ENST00000309890 CRIPTQ9P021 101 aa10.88□□□□□ -0.67
ATP2A3-201ENST00000309890 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
ATP2A3-201ENST00000309890 RBM12B-AS1Q9P1G2 102 aa10.84□□□□□ -0.67
ATP2A3-201ENST00000309890 Q5W150 140 aa10.84□□□□□ -0.67
ATP2A3-201ENST00000309890 ZCCHC13Q8WW36 166 aaKnown RBP10.84□□□□□ -0.67
ATP2A3-201ENST00000309890 ITPR2Q14571 2701 aa10.82□□□□□ -0.68
ATP2A3-201ENST00000309890 J3QL48 77 aa10.81□□□□□ -0.68
ATP2A3-201ENST00000309890 ASH1LQ9NR48 2969 aaKnown RBP10.81□□□□□ -0.68
ATP2A3-201ENST00000309890 COL6A3P12111 3177 aa10.8□□□□□ -0.68
ATP2A3-201ENST00000309890 A0A1B0GU33 70 aa10.78□□□□□ -0.68
ATP2A3-201ENST00000309890 SPINK7P58062 85 aa10.78□□□□□ -0.68
ATP2A3-201ENST00000309890 ZZEF1O43149 2961 aa10.77□□□□□ -0.68
ATP2A3-201ENST00000309890 LINC00483Q53H64 154 aa10.76□□□□□ -0.69
ATP2A3-201ENST00000309890 UTP20O75691 2785 aaKnown RBP10.76□□□□□ -0.69
ATP2A3-201ENST00000309890 Q6ZR54 194 aa10.75□□□□□ -0.69
ATP2A3-201ENST00000309890 DMBT1Q9UGM3 2413 aaPredicted RBP10.74□□□□□ -0.69
ATP2A3-201ENST00000309890 A0A0D9SG42 100 aa10.74□□□□□ -0.69
ATP2A3-201ENST00000309890 CFAP47Q6ZTR5 3102 aa10.71□□□□□ -0.69
ATP2A3-201ENST00000309890 NIPBLQ6KC79 2804 aaeCLIP10.69□□□□□ -0.7
ATP2A3-201ENST00000309890 ZANQ9Y493 2812 aa10.69□□□□□ -0.7
ATP2A3-201ENST00000309890 SPEGQ15772 3267 aa10.69□□□□□ -0.7
ATP2A3-201ENST00000309890 PANO1I0J062 215 aa10.68□□□□□ -0.7
ATP2A3-201ENST00000309890 LCE6AA0A183 80 aa10.68□□□□□ -0.7
ATP2A3-201ENST00000309890 DMAC1Q96GE9 116 aa10.68□□□□□ -0.7
ATP2A3-201ENST00000309890 APCP25054 2843 aa10.67□□□□□ -0.7
ATP2A3-201ENST00000309890 LINC01554Q52M75 96 aa10.67□□□□□ -0.7
ATP2A3-201ENST00000309890 PRAC1Q96KF2 57 aa10.65□□□□□ -0.7
ATP2A3-201ENST00000309890 HIVEP1P15822 2718 aa10.65□□□□□ -0.7
ATP2A3-201ENST00000309890 KRTAP7-1Q8IUC3 87 aa10.62□□□□□ -0.71
ATP2A3-201ENST00000309890 COX6B2Q6YFQ2 88 aa10.61□□□□□ -0.71
ATP2A3-201ENST00000309890 CELSR2Q9HCU4 2923 aa10.61□□□□□ -0.71
ATP2A3-201ENST00000309890 KMT2BQ9UMN6 2715 aaPredicted RBP10.57□□□□□ -0.72
ATP2A3-201ENST00000309890 KRTAP11-1Q8IUC1 163 aa10.56□□□□□ -0.72
ATP2A3-201ENST00000309890 HRNRQ86YZ3 2850 aaPredicted RBP10.55□□□□□ -0.72
ATP2A3-201ENST00000309890 EYSQ5T1H1 3165 aa10.55□□□□□ -0.72
ATP2A3-201ENST00000309890 TENM4Q6N022 2769 aa10.54□□□□□ -0.72
ATP2A3-201ENST00000309890 KRTAP10-1P60331 282 aa10.51□□□□□ -0.73
ATP2A3-201ENST00000309890 A0A087X002 238 aa10.51□□□□□ -0.73
ATP2A3-201ENST00000309890 KRTAP10-2P60368 255 aa10.51□□□□□ -0.73
ATP2A3-201ENST00000309890 NOTCH2NLQ7Z3S9 236 aa10.51□□□□□ -0.73
ATP2A3-201ENST00000309890 CSAG1Q6PB30 78 aa10.49□□□□□ -0.73
ATP2A3-201ENST00000309890 Q6ZSA8 131 aa10.49□□□□□ -0.73
ATP2A3-201ENST00000309890 LOC400499M0QZD8 3231 aa10.48□□□□□ -0.73
ATP2A3-201ENST00000309890 DMXL1Q9Y485 3027 aa10.48□□□□□ -0.73
ATP2A3-201ENST00000309890 DCHS2Q6V1P9 2916 aa10.45□□□□□ -0.74
ATP2A3-201ENST00000309890 ASB16-AS1Q495Z4 193 aa10.45□□□□□ -0.74
ATP2A3-201ENST00000309890 TNRC18O15417 2968 aaPredicted RBP10.45□□□□□ -0.74
ATP2A3-201ENST00000309890 Q6ZRN7 208 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms