RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 SPANXA2-OT1Q8N9U9 137 aa7.75□□□□□ -1.17
ABCA3-201ENST00000301732 TNP2Q05952 138 aa7.75□□□□□ -1.17
ABCA3-201ENST00000301732 PRUNE2Q8WUY3 3088 aa7.74□□□□□ -1.17
ABCA3-201ENST00000301732 DNAH14Q0VDD8 3507 aa7.72□□□□□ -1.17
ABCA3-201ENST00000301732 Q6ZSA8 131 aa7.72□□□□□ -1.17
ABCA3-201ENST00000301732 TLX1NBP0CAT3 122 aa7.71□□□□□ -1.17
ABCA3-201ENST00000301732 FLNAP21333 2647 aaKnown RBP7.71□□□□□ -1.18
ABCA3-201ENST00000301732 CHD6Q8TD26 2715 aa7.71□□□□□ -1.18
ABCA3-201ENST00000301732 WDFY4Q6ZS81 3184 aa7.7□□□□□ -1.18
ABCA3-201ENST00000301732 CHD7Q9P2D1 2997 aa7.69□□□□□ -1.18
ABCA3-201ENST00000301732 Q5VV11 94 aa7.68□□□□□ -1.18
ABCA3-201ENST00000301732 OXTP01178 125 aa7.68□□□□□ -1.18
ABCA3-201ENST00000301732 IGLV7-46A0A075B6I9 117 aa7.68□□□□□ -1.18
ABCA3-201ENST00000301732 Q75L30 129 aa7.68□□□□□ -1.18
ABCA3-201ENST00000301732 REV3LO60673 3130 aa7.66□□□□□ -1.18
ABCA3-201ENST00000301732 MGAQ8IWI9 3026 aa7.64□□□□□ -1.19
ABCA3-201ENST00000301732 CFAP46Q8IYW2 2715 aa7.64□□□□□ -1.19
ABCA3-201ENST00000301732 MAP1AP78559 2803 aaPredicted RBP7.63□□□□□ -1.19
ABCA3-201ENST00000301732 KLK9Q2XQG4 91 aa7.63□□□□□ -1.19
ABCA3-201ENST00000301732 LINC00483Q53H64 154 aa7.63□□□□□ -1.19
ABCA3-201ENST00000301732 STAB1Q9NY15 2570 aa7.62□□□□□ -1.19
ABCA3-201ENST00000301732 MMP24-AS1A0A0U1RRL7 71 aa7.62□□□□□ -1.19
ABCA3-201ENST00000301732 SZT2Q5T011 3432 aa7.62□□□□□ -1.19
ABCA3-201ENST00000301732 SPATA8Q6RVD6 105 aa7.6□□□□□ -1.19
ABCA3-201ENST00000301732 S4R3F8 94 aa7.6□□□□□ -1.19
ABCA3-201ENST00000301732 TEP1Q99973 2627 aaKnown RBP7.59□□□□□ -1.19
ABCA3-201ENST00000301732 TEX15Q9BXT5 2789 aa7.59□□□□□ -1.2
ABCA3-201ENST00000301732 Q5W150 140 aa7.58□□□□□ -1.2
ABCA3-201ENST00000301732 SETXQ7Z333 2677 aaKnown RBP7.57□□□□□ -1.2
ABCA3-201ENST00000301732 LINC01558Q9Y6Z2 57 aa7.57□□□□□ -1.2
ABCA3-201ENST00000301732 HELZ2Q9BYK8 2649 aaKnown RBP7.55□□□□□ -1.2
ABCA3-201ENST00000301732 ZCCHC13Q8WW36 166 aaKnown RBP7.53□□□□□ -1.2
ABCA3-201ENST00000301732 R4GN34 69 aa7.52□□□□□ -1.21
ABCA3-201ENST00000301732 NBEAL1Q6ZS30 2694 aa7.52□□□□□ -1.21
ABCA3-201ENST00000301732 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
ABCA3-201ENST00000301732 A0A0A0MQY5 61 aa7.51□□□□□ -1.21
ABCA3-201ENST00000301732 NOTCH1P46531 2555 aa7.5□□□□□ -1.21
ABCA3-201ENST00000301732 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
ABCA3-201ENST00000301732 FRYQ5TBA9 3013 aa7.49□□□□□ -1.21
ABCA3-201ENST00000301732 CFAP47Q6ZTR5 3102 aa7.49□□□□□ -1.21
ABCA3-201ENST00000301732 DMBT1Q9UGM3 2413 aaPredicted RBP7.49□□□□□ -1.21
ABCA3-201ENST00000301732 VCANP13611 3396 aa7.47□□□□□ -1.21
ABCA3-201ENST00000301732 KRTAP1-1Q07627 177 aa7.46□□□□□ -1.21
ABCA3-201ENST00000301732 M0QZ58 72 aa7.44□□□□□ -1.22
ABCA3-201ENST00000301732 HTTP42858 3142 aa7.44□□□□□ -1.22
ABCA3-201ENST00000301732 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
ABCA3-201ENST00000301732 LINC00472Q9H8W2 130 aa7.42□□□□□ -1.22
ABCA3-201ENST00000301732 ROMO1P60602 79 aa7.42□□□□□ -1.22
ABCA3-201ENST00000301732 KRTAP1-5Q9BYS1 174 aa7.42□□□□□ -1.22
ABCA3-201ENST00000301732 DMXL2Q8TDJ6 3036 aa7.42□□□□□ -1.22
ABCA3-201ENST00000301732 BAHCC1Q9P281 2608 aa7.42□□□□□ -1.22
ABCA3-201ENST00000301732 STAB2Q8WWQ8 2551 aa7.41□□□□□ -1.22
ABCA3-201ENST00000301732 NBEAL2Q6ZNJ1 2754 aa7.41□□□□□ -1.22
ABCA3-201ENST00000301732 H1FX-AS1Q4G0G2 97 aa7.41□□□□□ -1.22
ABCA3-201ENST00000301732 GCN1Q92616 2671 aaKnown RBP7.41□□□□□ -1.22
ABCA3-201ENST00000301732 UNC79Q9P2D8 2635 aa7.4□□□□□ -1.23
ABCA3-201ENST00000301732 A8MU10 97 aa7.4□□□□□ -1.23
ABCA3-201ENST00000301732 TRANK1O15050 2925 aa7.4□□□□□ -1.23
ABCA3-201ENST00000301732 KRTAP26-1Q6PEX3 210 aa7.39□□□□□ -1.23
ABCA3-201ENST00000301732 KALRNO60229 2985 aa7.39□□□□□ -1.23
ABCA3-201ENST00000301732 RPL37P61927 97 aaKnown RBP7.38□□□□□ -1.23
ABCA3-201ENST00000301732 COL6A3P12111 3177 aa7.38□□□□□ -1.23
ABCA3-201ENST00000301732 COL6A5A8TX70 2615 aa7.38□□□□□ -1.23
ABCA3-201ENST00000301732 A0A087X002 238 aa7.37□□□□□ -1.23
ABCA3-201ENST00000301732 NOTCH2NLQ7Z3S9 236 aa7.37□□□□□ -1.23
ABCA3-201ENST00000301732 PANO1I0J062 215 aa7.36□□□□□ -1.23
ABCA3-201ENST00000301732 SPEGQ15772 3267 aa7.35□□□□□ -1.23
ABCA3-201ENST00000301732 KRTAP10-2P60368 255 aa7.34□□□□□ -1.23
ABCA3-201ENST00000301732 ASH1LQ9NR48 2969 aaKnown RBP7.34□□□□□ -1.23
ABCA3-201ENST00000301732 DSPP15924 2871 aaKnown RBP7.33□□□□□ -1.24
ABCA3-201ENST00000301732 PLAC8Q9NZF1 115 aa7.32□□□□□ -1.24
ABCA3-201ENST00000301732 SPRR1AP35321 89 aa7.32□□□□□ -1.24
ABCA3-201ENST00000301732 KRTAP10-1P60331 282 aa7.3□□□□□ -1.24
ABCA3-201ENST00000301732 CHD9Q3L8U1 2897 aa7.3□□□□□ -1.24
ABCA3-201ENST00000301732 Q5VSD8 79 aa7.28□□□□□ -1.24
ABCA3-201ENST00000301732 LAMA1P25391 3075 aa7.28□□□□□ -1.24
ABCA3-201ENST00000301732 Q6ZR54 194 aa7.27□□□□□ -1.25
ABCA3-201ENST00000301732 NDUFAF8A1L188 74 aa7.27□□□□□ -1.25
ABCA3-201ENST00000301732 TACC2O95359 2948 aa7.26□□□□□ -1.25
ABCA3-201ENST00000301732 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
ABCA3-201ENST00000301732 C20orf166-AS1Q96NR2 134 aa7.24□□□□□ -1.25
ABCA3-201ENST00000301732 BOD1L1Q8NFC6 3051 aa7.23□□□□□ -1.25
ABCA3-201ENST00000301732 MYO15AQ9UKN7 3530 aa7.22□□□□□ -1.25
ABCA3-201ENST00000301732 UBR5O95071 2799 aaPredicted RBP7.22□□□□□ -1.25
ABCA3-201ENST00000301732 NSD1Q96L73 2696 aaPredicted RBP7.21□□□□□ -1.25
ABCA3-201ENST00000301732 NBEAQ8NFP9 2946 aa7.21□□□□□ -1.26
ABCA3-201ENST00000301732 ZNF292O60281 2723 aa7.2□□□□□ -1.26
ABCA3-201ENST00000301732 CRYBG3Q68DQ2 2970 aa7.2□□□□□ -1.26
ABCA3-201ENST00000301732 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
ABCA3-201ENST00000301732 KMT2BQ9UMN6 2715 aaPredicted RBP7.18□□□□□ -1.26
ABCA3-201ENST00000301732 PLAC4Q8WY50 150 aa7.18□□□□□ -1.26
ABCA3-201ENST00000301732 FRYLO94915 3013 aa7.18□□□□□ -1.26
ABCA3-201ENST00000301732 KRTAP25-1Q3LHN0 102 aa7.15□□□□□ -1.27
ABCA3-201ENST00000301732 SPRR1BP22528 89 aa7.15□□□□□ -1.27
ABCA3-201ENST00000301732 COL12A1Q99715 3063 aa7.14□□□□□ -1.27
ABCA3-201ENST00000301732 KRTAP29-1A8MX34 341 aaPredicted RBP7.12□□□□□ -1.27
ABCA3-201ENST00000301732 A6NN06 94 aa7.12□□□□□ -1.27
ABCA3-201ENST00000301732 LRBAP50851 2863 aa7.12□□□□□ -1.27
ABCA3-201ENST00000301732 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
ABCA3-201ENST00000301732 ATMQ13315 3056 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms