RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 Q8N9P0 234 aaPredicted RBP7.01□□□□□ -1.29
SNX20-201ENST00000300590 OTOGQ6ZRI0 2925 aa7.01□□□□□ -1.29
SNX20-201ENST00000300590 PRLHP81277 87 aa7□□□□□ -1.29
SNX20-201ENST00000300590 LCA10Q71F78 164 aa6.99□□□□□ -1.29
SNX20-201ENST00000300590 FLNBO75369 2602 aaKnown RBP6.99□□□□□ -1.29
SNX20-201ENST00000300590 KRTAP4-16G5E9R7 235 aaPredicted RBP6.99□□□□□ -1.29
SNX20-201ENST00000300590 A0A1B0GW54 56 aa6.99□□□□□ -1.29
SNX20-201ENST00000300590 HELZ2Q9BYK8 2649 aaKnown RBP6.99□□□□□ -1.29
SNX20-201ENST00000300590 CASC2Q6XLA1 102 aa6.98□□□□□ -1.29
SNX20-201ENST00000300590 PCOTHQ58A44 107 aa6.98□□□□□ -1.29
SNX20-201ENST00000300590 KRTAP7-1Q8IUC3 87 aa6.98□□□□□ -1.29
SNX20-201ENST00000300590 IGKV2-24A0A0C4DH68 120 aa6.97□□□□□ -1.29
SNX20-201ENST00000300590 SPAG11AQ6PDA7 123 aa6.96□□□□□ -1.29
SNX20-201ENST00000300590 FBN1P35555 2871 aaKnown RBP6.96□□□□□ -1.3
SNX20-201ENST00000300590 MAST4O15021 2626 aa6.95□□□□□ -1.3
SNX20-201ENST00000300590 C7orf65Q6ZTY9 151 aa6.95□□□□□ -1.3
SNX20-201ENST00000300590 HECTD1Q9ULT8 2610 aa6.95□□□□□ -1.3
SNX20-201ENST00000300590 REG3GQ6UW15 175 aa6.95□□□□□ -1.3
SNX20-201ENST00000300590 H0Y9J4 135 aa6.94□□□□□ -1.3
SNX20-201ENST00000300590 ANK3Q12955 4377 aaKnown RBP6.94□□□□□ -1.3
SNX20-201ENST00000300590 SPRR1AP35321 89 aa6.94□□□□□ -1.3
SNX20-201ENST00000300590 NOTCH1P46531 2555 aa6.94□□□□□ -1.3
SNX20-201ENST00000300590 DEFB131BA0A096LNP1 70 aa6.93□□□□□ -1.3
SNX20-201ENST00000300590 LINC01556Q5JQF7 62 aa6.93□□□□□ -1.3
SNX20-201ENST00000300590 COA5Q86WW8 74 aa6.93□□□□□ -1.3
SNX20-201ENST00000300590 TENM4Q6N022 2769 aa6.92□□□□□ -1.3
SNX20-201ENST00000300590 OXLD1Q5BKU9 147 aa6.92□□□□□ -1.3
SNX20-201ENST00000300590 COL6A5A8TX70 2615 aa6.92□□□□□ -1.3
SNX20-201ENST00000300590 A6NN06 94 aa6.91□□□□□ -1.3
SNX20-201ENST00000300590 H3BS24 57 aa6.91□□□□□ -1.3
SNX20-201ENST00000300590 LOC101927531A0A1B0GV80 90 aa6.91□□□□□ -1.3
SNX20-201ENST00000300590 CNBPP62633 177 aaKnown RBP6.91□□□□□ -1.3
SNX20-201ENST00000300590 C8orf87E5RJ46 101 aa6.9□□□□□ -1.3
SNX20-201ENST00000300590 PRAC1Q96KF2 57 aa6.9□□□□□ -1.3
SNX20-201ENST00000300590 KRTAP29-1A8MX34 341 aaPredicted RBP6.9□□□□□ -1.31
SNX20-201ENST00000300590 CDC42SE1Q9NRR8 79 aa6.9□□□□□ -1.31
SNX20-201ENST00000300590 Q75L30 129 aa6.89□□□□□ -1.31
SNX20-201ENST00000300590 PHF5AQ7RTV0 110 aaKnown RBP6.89□□□□□ -1.31
SNX20-201ENST00000300590 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
SNX20-201ENST00000300590 NSD1Q96L73 2696 aaPredicted RBP6.88□□□□□ -1.31
SNX20-201ENST00000300590 MOBPQ13875 183 aa6.88□□□□□ -1.31
SNX20-201ENST00000300590 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
SNX20-201ENST00000300590 SPANXA2-OT1Q8N9U9 137 aa6.88□□□□□ -1.31
SNX20-201ENST00000300590 MDFIQ99750 246 aa6.88□□□□□ -1.31
SNX20-201ENST00000300590 PLA2G2DQ9UNK4 145 aa6.88□□□□□ -1.31
SNX20-201ENST00000300590 COL7A1Q02388 2944 aa6.87□□□□□ -1.31
SNX20-201ENST00000300590 INAFM1C9JVW0 142 aa6.86□□□□□ -1.31
SNX20-201ENST00000300590 H3BNG1 76 aa6.85□□□□□ -1.31
SNX20-201ENST00000300590 IGLV5-37A0A075B6J1 123 aa6.85□□□□□ -1.31
SNX20-201ENST00000300590 C9orf163Q8N9P6 203 aa6.85□□□□□ -1.31
SNX20-201ENST00000300590 A8MWP4 228 aa6.84□□□□□ -1.31
SNX20-201ENST00000300590 SPINK7P58062 85 aa6.84□□□□□ -1.31
SNX20-201ENST00000300590 STAB1Q9NY15 2570 aa6.83□□□□□ -1.32
SNX20-201ENST00000300590 NBEAL1Q6ZS30 2694 aa6.82□□□□□ -1.32
SNX20-201ENST00000300590 H3BPC8 53 aa6.82□□□□□ -1.32
SNX20-201ENST00000300590 DNAH10OSP0CZ25 163 aa6.82□□□□□ -1.32
SNX20-201ENST00000300590 LINC00313P59037 77 aa6.82□□□□□ -1.32
SNX20-201ENST00000300590 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
SNX20-201ENST00000300590 IGLV7-46A0A075B6I9 117 aa6.81□□□□□ -1.32
SNX20-201ENST00000300590 LINC00472Q9H8W2 130 aa6.8□□□□□ -1.32
SNX20-201ENST00000300590 KRTAP10-11P60412 298 aa6.79□□□□□ -1.32
SNX20-201ENST00000300590 KRTAP11-1Q8IUC1 163 aa6.79□□□□□ -1.32
SNX20-201ENST00000300590 MMP24-AS1A0A0U1RRL7 71 aa6.79□□□□□ -1.32
SNX20-201ENST00000300590 ADM2Q7Z4H4 148 aa6.79□□□□□ -1.32
SNX20-201ENST00000300590 IGLV9-49A0A0B4J1Y8 123 aa6.78□□□□□ -1.32
SNX20-201ENST00000300590 IGLV8-61A0A075B6I0 122 aa6.76□□□□□ -1.33
SNX20-201ENST00000300590 IGHV6-1A0A0B4J1U7 121 aa6.76□□□□□ -1.33
SNX20-201ENST00000300590 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
SNX20-201ENST00000300590 TENM2Q9NT68 2774 aa6.75□□□□□ -1.33
SNX20-201ENST00000300590 LINC01554Q52M75 96 aa6.75□□□□□ -1.33
SNX20-201ENST00000300590 LINC01558Q9Y6Z2 57 aa6.75□□□□□ -1.33
SNX20-201ENST00000300590 HRES1P13985 223 aa6.74□□□□□ -1.33
SNX20-201ENST00000300590 KMT2BQ9UMN6 2715 aaPredicted RBP6.74□□□□□ -1.33
SNX20-201ENST00000300590 K7EIL1 84 aa6.71□□□□□ -1.33
SNX20-201ENST00000300590 ANK2Q01484 3957 aa6.71□□□□□ -1.33
SNX20-201ENST00000300590 C8orf17Q9NRJ1 99 aa6.7□□□□□ -1.34
SNX20-201ENST00000300590 CDK2AP2O75956 126 aa6.69□□□□□ -1.34
SNX20-201ENST00000300590 A0A087X002 238 aa6.68□□□□□ -1.34
SNX20-201ENST00000300590 SPINK6Q6UWN8 80 aa6.68□□□□□ -1.34
SNX20-201ENST00000300590 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
SNX20-201ENST00000300590 KRTAP1-5Q9BYS1 174 aa6.68□□□□□ -1.34
SNX20-201ENST00000300590 TP53AIP1Q9HCN2 124 aa6.67□□□□□ -1.34
SNX20-201ENST00000300590 DNAH10Q8IVF4 4471 aa6.67□□□□□ -1.34
SNX20-201ENST00000300590 ANAPC11Q9NYG5 84 aa6.66□□□□□ -1.34
SNX20-201ENST00000300590 STAB2Q8WWQ8 2551 aa6.66□□□□□ -1.34
SNX20-201ENST00000300590 RETNLBQ9BQ08 111 aa6.65□□□□□ -1.34
SNX20-201ENST00000300590 PLAC8Q9NZF1 115 aa6.65□□□□□ -1.35
SNX20-201ENST00000300590 Q96NJ1 140 aa6.64□□□□□ -1.35
SNX20-201ENST00000300590 SPRR1BP22528 89 aa6.64□□□□□ -1.35
SNX20-201ENST00000300590 MRPL34Q9BQ48 92 aaKnown RBP6.63□□□□□ -1.35
SNX20-201ENST00000300590 PANO1I0J062 215 aa6.62□□□□□ -1.35
SNX20-201ENST00000300590 Q6ZR54 194 aa6.62□□□□□ -1.35
SNX20-201ENST00000300590 MGAM2Q2M2H8 2515 aa6.62□□□□□ -1.35
SNX20-201ENST00000300590 A0A1B0GVX0 72 aa6.62□□□□□ -1.35
SNX20-201ENST00000300590 UBE2DNLQ8IWF7 75 aa6.61□□□□□ -1.35
SNX20-201ENST00000300590 Q5W150 140 aa6.6□□□□□ -1.35
SNX20-201ENST00000300590 LYSTQ99698 3801 aa6.6□□□□□ -1.35
SNX20-201ENST00000300590 A0A1B0GU69 56 aa6.59□□□□□ -1.35
SNX20-201ENST00000300590 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
SNX20-201ENST00000300590 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms