RNA–Protein interactions for RNA: ENST00000300305.7

RUNX1-201, Transcript of runt related transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX1, Length 6,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-201ENST00000300305 HTTP42858 3142 aa9.93□□□□□ -0.82
RUNX1-201ENST00000300305 FP248Q71RG6 208 aaPredicted RBP9.92□□□□□ -0.82
RUNX1-201ENST00000300305 ITPR3Q14573 2671 aa9.92□□□□□ -0.82
RUNX1-201ENST00000300305 A0A0C4DFX4 3053 aa9.91□□□□□ -0.82
RUNX1-201ENST00000300305 LAMA2P24043 3122 aaKnown RBP9.9□□□□□ -0.82
RUNX1-201ENST00000300305 Q5VV11 94 aa9.89□□□□□ -0.83
RUNX1-201ENST00000300305 R4GN34 69 aa9.87□□□□□ -0.83
RUNX1-201ENST00000300305 LINC01558Q9Y6Z2 57 aa9.86□□□□□ -0.83
RUNX1-201ENST00000300305 XIRP2A4UGR9 3374 aa9.86□□□□□ -0.83
RUNX1-201ENST00000300305 DMAC1Q96GE9 116 aa9.85□□□□□ -0.83
RUNX1-201ENST00000300305 ATRQ13535 2644 aa9.82□□□□□ -0.84
RUNX1-201ENST00000300305 CHD9Q3L8U1 2897 aa9.82□□□□□ -0.84
RUNX1-201ENST00000300305 KRTAP1-5Q9BYS1 174 aa9.82□□□□□ -0.84
RUNX1-201ENST00000300305 PRUNE2Q8WUY3 3088 aa9.82□□□□□ -0.84
RUNX1-201ENST00000300305 SPATA8Q6RVD6 105 aa9.82□□□□□ -0.84
RUNX1-201ENST00000300305 PLAC8Q9NZF1 115 aa9.81□□□□□ -0.84
RUNX1-201ENST00000300305 MGAQ8IWI9 3026 aa9.8□□□□□ -0.84
RUNX1-201ENST00000300305 UNC80Q8N2C7 3258 aa9.8□□□□□ -0.84
RUNX1-201ENST00000300305 TRIOO75962 3097 aa9.78□□□□□ -0.84
RUNX1-201ENST00000300305 Q5VSD8 79 aa9.77□□□□□ -0.85
RUNX1-201ENST00000300305 LINC00472Q9H8W2 130 aa9.76□□□□□ -0.85
RUNX1-201ENST00000300305 OXTP01178 125 aa9.76□□□□□ -0.85
RUNX1-201ENST00000300305 KRTAP10-2P60368 255 aa9.76□□□□□ -0.85
RUNX1-201ENST00000300305 CFAP46Q8IYW2 2715 aa9.75□□□□□ -0.85
RUNX1-201ENST00000300305 M0QZ58 72 aa9.75□□□□□ -0.85
RUNX1-201ENST00000300305 MAST4O15021 2626 aa9.74□□□□□ -0.85
RUNX1-201ENST00000300305 WDFY4Q6ZS81 3184 aa9.73□□□□□ -0.85
RUNX1-201ENST00000300305 HELZ2Q9BYK8 2649 aaKnown RBP9.73□□□□□ -0.85
RUNX1-201ENST00000300305 KRTAP10-1P60331 282 aa9.72□□□□□ -0.85
RUNX1-201ENST00000300305 KRTAP26-1Q6PEX3 210 aa9.72□□□□□ -0.85
RUNX1-201ENST00000300305 CELSR3Q9NYQ7 3312 aa9.72□□□□□ -0.85
RUNX1-201ENST00000300305 FREM2Q5SZK8 3169 aa9.72□□□□□ -0.85
RUNX1-201ENST00000300305 CDH23Q9H251 3354 aa9.71□□□□□ -0.86
RUNX1-201ENST00000300305 SPRR1AP35321 89 aa9.7□□□□□ -0.86
RUNX1-201ENST00000300305 CENPEQ02224 2701 aa9.69□□□□□ -0.86
RUNX1-201ENST00000300305 ADM2Q7Z4H4 148 aa9.69□□□□□ -0.86
RUNX1-201ENST00000300305 A0A0A0MQY5 61 aa9.68□□□□□ -0.86
RUNX1-201ENST00000300305 PANO1I0J062 215 aa9.67□□□□□ -0.86
RUNX1-201ENST00000300305 ROMO1P60602 79 aa9.67□□□□□ -0.86
RUNX1-201ENST00000300305 AKAP13Q12802 2813 aa9.65□□□□□ -0.87
RUNX1-201ENST00000300305 H1FX-AS1Q4G0G2 97 aa9.64□□□□□ -0.87
RUNX1-201ENST00000300305 RPL37P61927 97 aaKnown RBP9.64□□□□□ -0.87
RUNX1-201ENST00000300305 CHD6Q8TD26 2715 aa9.63□□□□□ -0.87
RUNX1-201ENST00000300305 DNAH14Q0VDD8 3507 aa9.58□□□□□ -0.88
RUNX1-201ENST00000300305 A0A087X002 238 aa9.57□□□□□ -0.88
RUNX1-201ENST00000300305 Q6ZR54 194 aa9.57□□□□□ -0.88
RUNX1-201ENST00000300305 NOTCH2NLQ7Z3S9 236 aa9.57□□□□□ -0.88
RUNX1-201ENST00000300305 SEC61BP60468 96 aaKnown RBP9.56□□□□□ -0.88
RUNX1-201ENST00000300305 TEX15Q9BXT5 2789 aa9.54□□□□□ -0.88
RUNX1-201ENST00000300305 A8MU10 97 aa9.52□□□□□ -0.88
RUNX1-201ENST00000300305 SPRR1BP22528 89 aa9.52□□□□□ -0.89
RUNX1-201ENST00000300305 TRANK1O15050 2925 aa9.52□□□□□ -0.89
RUNX1-201ENST00000300305 VPS13AQ96RL7 3174 aa9.51□□□□□ -0.89
RUNX1-201ENST00000300305 PLAC4Q8WY50 150 aa9.5□□□□□ -0.89
RUNX1-201ENST00000300305 TEP1Q99973 2627 aaKnown RBP9.47□□□□□ -0.89
RUNX1-201ENST00000300305 FLG2Q5D862 2391 aaPredicted RBP9.45□□□□□ -0.9
RUNX1-201ENST00000300305 FRYQ5TBA9 3013 aa9.45□□□□□ -0.9
RUNX1-201ENST00000300305 KRTAP11-1Q8IUC1 163 aa9.43□□□□□ -0.9
RUNX1-201ENST00000300305 SZT2Q5T011 3432 aa9.43□□□□□ -0.9
RUNX1-201ENST00000300305 LCE6AA0A183 80 aa9.42□□□□□ -0.9
RUNX1-201ENST00000300305 GCN1Q92616 2671 aaKnown RBP9.4□□□□□ -0.9
RUNX1-201ENST00000300305 VCANP13611 3396 aa9.4□□□□□ -0.91
RUNX1-201ENST00000300305 NBEAL1Q6ZS30 2694 aa9.38□□□□□ -0.91
RUNX1-201ENST00000300305 MAP1AP78559 2803 aaPredicted RBP9.38□□□□□ -0.91
RUNX1-201ENST00000300305 STAB1Q9NY15 2570 aa9.37□□□□□ -0.91
RUNX1-201ENST00000300305 C20orf166-AS1Q96NR2 134 aa9.37□□□□□ -0.91
RUNX1-201ENST00000300305 DSPP15924 2871 aaKnown RBP9.36□□□□□ -0.91
RUNX1-201ENST00000300305 NBEAL2Q6ZNJ1 2754 aa9.35□□□□□ -0.91
RUNX1-201ENST00000300305 COL6A3P12111 3177 aa9.34□□□□□ -0.91
RUNX1-201ENST00000300305 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
RUNX1-201ENST00000300305 KRTAP29-1A8MX34 341 aaPredicted RBP9.33□□□□□ -0.92
RUNX1-201ENST00000300305 LAMA1P25391 3075 aa9.31□□□□□ -0.92
RUNX1-201ENST00000300305 ZNF292O60281 2723 aa9.29□□□□□ -0.92
RUNX1-201ENST00000300305 UNC79Q9P2D8 2635 aa9.29□□□□□ -0.92
RUNX1-201ENST00000300305 A8MUU9 505 aa9.27□□□□□ -0.93
RUNX1-201ENST00000300305 KALRNO60229 2985 aa9.26□□□□□ -0.93
RUNX1-201ENST00000300305 SETXQ7Z333 2677 aaKnown RBP9.24□□□□□ -0.93
RUNX1-201ENST00000300305 COL6A5A8TX70 2615 aa9.23□□□□□ -0.93
RUNX1-201ENST00000300305 KRTAP25-1Q3LHN0 102 aa9.23□□□□□ -0.93
RUNX1-201ENST00000300305 REV3LO60673 3130 aa9.22□□□□□ -0.93
RUNX1-201ENST00000300305 KRTAP16-1A8MUX0 517 aa9.22□□□□□ -0.93
RUNX1-201ENST00000300305 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
RUNX1-201ENST00000300305 NDUFAF8A1L188 74 aa9.21□□□□□ -0.93
RUNX1-201ENST00000300305 NOTCH1P46531 2555 aa9.19□□□□□ -0.94
RUNX1-201ENST00000300305 CFAP47Q6ZTR5 3102 aa9.18□□□□□ -0.94
RUNX1-201ENST00000300305 KRTAP7-1Q8IUC3 87 aa9.18□□□□□ -0.94
RUNX1-201ENST00000300305 A6NN06 94 aa9.15□□□□□ -0.94
RUNX1-201ENST00000300305 BOD1L1Q8NFC6 3051 aa9.14□□□□□ -0.95
RUNX1-201ENST00000300305 IGSF10Q6WRI0 2623 aa9.13□□□□□ -0.95
RUNX1-201ENST00000300305 C10orf95Q9H7T3 257 aa9.13□□□□□ -0.95
RUNX1-201ENST00000300305 LRBAP50851 2863 aa9.12□□□□□ -0.95
RUNX1-201ENST00000300305 KRTAP13-2Q52LG2 175 aa9.12□□□□□ -0.95
RUNX1-201ENST00000300305 DMXL2Q8TDJ6 3036 aa9.11□□□□□ -0.95
RUNX1-201ENST00000300305 Q6ZRN7 208 aaPredicted RBP9.1□□□□□ -0.95
RUNX1-201ENST00000300305 UBR5O95071 2799 aaPredicted RBP9.08□□□□□ -0.96
RUNX1-201ENST00000300305 ATMQ13315 3056 aa9.08□□□□□ -0.96
RUNX1-201ENST00000300305 TACC2O95359 2948 aa9.07□□□□□ -0.96
RUNX1-201ENST00000300305 SPEGQ15772 3267 aa9.04□□□□□ -0.96
RUNX1-201ENST00000300305 SPTBN5Q9NRC6 3674 aaKnown RBP9.04□□□□□ -0.96
RUNX1-201ENST00000300305 FRYLO94915 3013 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms