RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 KRTAP4-16G5E9R7 235 aaPredicted RBP4.76□□□□□ -1.65
PRKAA1-201ENST00000296800 M0R2N4 97 aa4.76□□□□□ -1.65
PRKAA1-201ENST00000296800 CNBPP62633 177 aaKnown RBP4.76□□□□□ -1.65
PRKAA1-201ENST00000296800 SERP2Q8N6R1 65 aa4.76□□□□□ -1.65
PRKAA1-201ENST00000296800 HUWE1Q7Z6Z7 4374 aaKnown RBP4.75□□□□□ -1.65
PRKAA1-201ENST00000296800 FAM168BA1KXE4 195 aa4.75□□□□□ -1.65
PRKAA1-201ENST00000296800 PSCAO43653 123 aa4.75□□□□□ -1.65
PRKAA1-201ENST00000296800 LINC01547P58512 204 aaPredicted RBP4.75□□□□□ -1.65
PRKAA1-201ENST00000296800 APLNQ9ULZ1 77 aa4.75□□□□□ -1.65
PRKAA1-201ENST00000296800 DNAH1Q9P2D7 4330 aa4.75□□□□□ -1.65
PRKAA1-201ENST00000296800 TENM2Q9NT68 2774 aa4.75□□□□□ -1.65
PRKAA1-201ENST00000296800 IGLV5-48A0A075B6I7 105 aa4.74□□□□□ -1.65
PRKAA1-201ENST00000296800 NUPR2A6NF83 97 aa4.74□□□□□ -1.65
PRKAA1-201ENST00000296800 RPL37AP8A6NKH3 93 aa4.74□□□□□ -1.65
PRKAA1-201ENST00000296800 C16orf90A8MZG2 172 aa4.74□□□□□ -1.65
PRKAA1-201ENST00000296800 BCE1O60756 84 aa4.74□□□□□ -1.65
PRKAA1-201ENST00000296800 CRYGAP11844 174 aa4.74□□□□□ -1.65
PRKAA1-201ENST00000296800 A0A1B0GW54 56 aa4.73□□□□□ -1.65
PRKAA1-201ENST00000296800 HAMPP81172 84 aa4.73□□□□□ -1.65
PRKAA1-201ENST00000296800 REG3GQ6UW15 175 aa4.73□□□□□ -1.65
PRKAA1-201ENST00000296800 FAM19A1Q7Z5A9 133 aa4.73□□□□□ -1.65
PRKAA1-201ENST00000296800 KRTAP7-1Q8IUC3 87 aa4.73□□□□□ -1.65
PRKAA1-201ENST00000296800 Q8N377 158 aa4.73□□□□□ -1.65
PRKAA1-201ENST00000296800 Q9BRP9 147 aa4.73□□□□□ -1.65
PRKAA1-201ENST00000296800 RYR2Q92736 4967 aa4.73□□□□□ -1.65
PRKAA1-201ENST00000296800 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
PRKAA1-201ENST00000296800 A0A096LNI7 61 aa4.72□□□□□ -1.65
PRKAA1-201ENST00000296800 UBE2BP63146 152 aa4.72□□□□□ -1.65
PRKAA1-201ENST00000296800 SMIM20Q8N5G0 67 aa4.72□□□□□ -1.65
PRKAA1-201ENST00000296800 FUSP35637 526 aaKnown RBP eCLIP4.71□□□□□ -1.66
PRKAA1-201ENST00000296800 DEFB105AQ8NG35 78 aa4.71□□□□□ -1.66
PRKAA1-201ENST00000296800 UBR4Q5T4S7 5183 aa4.7□□□□□ -1.66
PRKAA1-201ENST00000296800 F8WEM9 126 aa4.7□□□□□ -1.66
PRKAA1-201ENST00000296800 HERC2O95714 4834 aa4.7□□□□□ -1.66
PRKAA1-201ENST00000296800 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
PRKAA1-201ENST00000296800 TRAV7A0A075B6U4 112 aa4.69□□□□□ -1.66
PRKAA1-201ENST00000296800 IGKV2-24A0A0C4DH68 120 aa4.69□□□□□ -1.66
PRKAA1-201ENST00000296800 NBDYA0A0U1RRE5 68 aa4.69□□□□□ -1.66
PRKAA1-201ENST00000296800 TMEM258P61165 79 aa4.69□□□□□ -1.66
PRKAA1-201ENST00000296800 NREPQ16612 68 aa4.69□□□□□ -1.66
PRKAA1-201ENST00000296800 C1orf137Q5JT78 98 aa4.69□□□□□ -1.66
PRKAA1-201ENST00000296800 Q8NBF4 154 aa4.69□□□□□ -1.66
PRKAA1-201ENST00000296800 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.68□□□□□ -1.66
PRKAA1-201ENST00000296800 C3orf84H3BNL1 204 aa4.68□□□□□ -1.66
PRKAA1-201ENST00000296800 SCXQ7RTU7 201 aa4.68□□□□□ -1.66
PRKAA1-201ENST00000296800 ST20-AS1Q8NBB2 130 aa4.68□□□□□ -1.66
PRKAA1-201ENST00000296800 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
PRKAA1-201ENST00000296800 BPY2O14599 106 aa4.67□□□□□ -1.66
PRKAA1-201ENST00000296800 ERC2-IT1O76042 136 aa4.67□□□□□ -1.66
PRKAA1-201ENST00000296800 IGKV4-1P06312 121 aa4.67□□□□□ -1.66
PRKAA1-201ENST00000296800 SVIPQ8NHG7 77 aa4.67□□□□□ -1.66
PRKAA1-201ENST00000296800 LINC00474Q9P2X8 69 aa4.67□□□□□ -1.66
PRKAA1-201ENST00000296800 STAB2Q8WWQ8 2551 aa4.67□□□□□ -1.66
PRKAA1-201ENST00000296800 A0A1W2PNM2 257 aa4.66□□□□□ -1.66
PRKAA1-201ENST00000296800 A0A1W2PNN7 141 aa4.66□□□□□ -1.66
PRKAA1-201ENST00000296800 LRCOL1A6NCL2 159 aa4.66□□□□□ -1.66
PRKAA1-201ENST00000296800 Q6ZRN7 208 aaPredicted RBP4.66□□□□□ -1.66
PRKAA1-201ENST00000296800 C9orf163Q8N9P6 203 aa4.66□□□□□ -1.66
PRKAA1-201ENST00000296800 SPRR4Q96PI1 79 aa4.66□□□□□ -1.66
PRKAA1-201ENST00000296800 H0Y9J4 135 aa4.65□□□□□ -1.67
PRKAA1-201ENST00000296800 PRLHP81277 87 aa4.65□□□□□ -1.67
PRKAA1-201ENST00000296800 DNAH9Q9NYC9 4486 aa4.65□□□□□ -1.67
PRKAA1-201ENST00000296800 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
PRKAA1-201ENST00000296800 J3KT08 172 aa4.64□□□□□ -1.67
PRKAA1-201ENST00000296800 CHTF8P0CG12 524 aa4.64□□□□□ -1.67
PRKAA1-201ENST00000296800 PHF5AQ7RTV0 110 aaKnown RBP4.64□□□□□ -1.67
PRKAA1-201ENST00000296800 SMIM29Q86T20 159 aa4.64□□□□□ -1.67
PRKAA1-201ENST00000296800 HIGD2AQ9BW72 106 aa4.64□□□□□ -1.67
PRKAA1-201ENST00000296800 UBE2AP49459 152 aa4.63□□□□□ -1.67
PRKAA1-201ENST00000296800 C20orf197Q8N268 126 aa4.63□□□□□ -1.67
PRKAA1-201ENST00000296800 CYSTM1Q9H1C7 97 aa4.63□□□□□ -1.67
PRKAA1-201ENST00000296800 SPRR1BP22528 89 aa4.62□□□□□ -1.67
PRKAA1-201ENST00000296800 KLKP1Q107X0 134 aa4.62□□□□□ -1.67
PRKAA1-201ENST00000296800 IGFL1Q6UW32 110 aa4.62□□□□□ -1.67
PRKAA1-201ENST00000296800 SACSQ9NZJ4 4579 aa4.62□□□□□ -1.67
PRKAA1-201ENST00000296800 LCE6AA0A183 80 aa4.61□□□□□ -1.67
PRKAA1-201ENST00000296800 EPM2AB3EWF7 344 aa4.61□□□□□ -1.67
PRKAA1-201ENST00000296800 Q8N9L7 120 aa4.61□□□□□ -1.67
PRKAA1-201ENST00000296800 SPACA4Q8TDM5 124 aa4.61□□□□□ -1.67
PRKAA1-201ENST00000296800 FAM236DA0A1B0GTK5 79 aa4.6□□□□□ -1.67
PRKAA1-201ENST00000296800 NDUFC1O43677 76 aa4.6□□□□□ -1.67
PRKAA1-201ENST00000296800 FAM236CP0DP71 79 aa4.6□□□□□ -1.67
PRKAA1-201ENST00000296800 A0A087WTM6 91 aa4.59□□□□□ -1.67
PRKAA1-201ENST00000296800 ATP5EP56381 51 aaPredicted RBP4.59□□□□□ -1.67
PRKAA1-201ENST00000296800 RPS28P62857 69 aaKnown RBP4.58□□□□□ -1.68
PRKAA1-201ENST00000296800 KRTAP13-1Q8IUC0 172 aa4.58□□□□□ -1.68
PRKAA1-201ENST00000296800 KRTAP11-1Q8IUC1 163 aa4.58□□□□□ -1.68
PRKAA1-201ENST00000296800 OCR1Q9BZK8 76 aa4.58□□□□□ -1.68
PRKAA1-201ENST00000296800 H7BZZ5 65 aa4.57□□□□□ -1.68
PRKAA1-201ENST00000296800 RTL8CO15255 209 aa4.57□□□□□ -1.68
PRKAA1-201ENST00000296800 DSCR10P59022 87 aa4.57□□□□□ -1.68
PRKAA1-201ENST00000296800 Q6ZR54 194 aa4.57□□□□□ -1.68
PRKAA1-201ENST00000296800 PRR26Q8N8Z3 221 aa4.57□□□□□ -1.68
PRKAA1-201ENST00000296800 TMEM254Q8TBM7 123 aa4.57□□□□□ -1.68
PRKAA1-201ENST00000296800 LYSTQ99698 3801 aa4.57□□□□□ -1.68
PRKAA1-201ENST00000296800 ZNF706Q9Y5V0 76 aaPredicted RBP4.57□□□□□ -1.68
PRKAA1-201ENST00000296800 DNAH10Q8IVF4 4471 aa4.56□□□□□ -1.68
PRKAA1-201ENST00000296800 A0A087WSZ3 146 aa4.56□□□□□ -1.68
PRKAA1-201ENST00000296800 PANO1I0J062 215 aa4.56□□□□□ -1.68
PRKAA1-201ENST00000296800 K7EQZ3 153 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms