RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 J3QL48 77 aa6.67□□□□□ -1.34
PBRM1-201ENST00000296302 KRTAP4-16G5E9R7 235 aaPredicted RBP6.66□□□□□ -1.34
PBRM1-201ENST00000296302 CHD7Q9P2D1 2997 aa6.65□□□□□ -1.35
PBRM1-201ENST00000296302 LINC00483Q53H64 154 aa6.61□□□□□ -1.35
PBRM1-201ENST00000296302 A0A0C4DFX4 3053 aa6.6□□□□□ -1.35
PBRM1-201ENST00000296302 Q6ZSA8 131 aa6.6□□□□□ -1.35
PBRM1-201ENST00000296302 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
PBRM1-201ENST00000296302 AKAP13Q12802 2813 aa6.59□□□□□ -1.36
PBRM1-201ENST00000296302 LCE6AA0A183 80 aa6.59□□□□□ -1.36
PBRM1-201ENST00000296302 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
PBRM1-201ENST00000296302 S4R3F8 94 aa6.58□□□□□ -1.36
PBRM1-201ENST00000296302 MAST4O15021 2626 aa6.58□□□□□ -1.36
PBRM1-201ENST00000296302 ROMO1P60602 79 aa6.58□□□□□ -1.36
PBRM1-201ENST00000296302 KRTAP1-5Q9BYS1 174 aa6.58□□□□□ -1.36
PBRM1-201ENST00000296302 A0A0A0MQY5 61 aa6.56□□□□□ -1.36
PBRM1-201ENST00000296302 CHD6Q8TD26 2715 aa6.56□□□□□ -1.36
PBRM1-201ENST00000296302 SPATA8Q6RVD6 105 aa6.56□□□□□ -1.36
PBRM1-201ENST00000296302 H1FX-AS1Q4G0G2 97 aa6.55□□□□□ -1.36
PBRM1-201ENST00000296302 A6NN06 94 aa6.55□□□□□ -1.36
PBRM1-201ENST00000296302 CHD9Q3L8U1 2897 aa6.55□□□□□ -1.36
PBRM1-201ENST00000296302 C5orf42Q9H799 3197 aa6.54□□□□□ -1.36
PBRM1-201ENST00000296302 CENPEQ02224 2701 aa6.53□□□□□ -1.36
PBRM1-201ENST00000296302 UNC79Q9P2D8 2635 aa6.51□□□□□ -1.37
PBRM1-201ENST00000296302 CFAP54Q96N23 3096 aa6.5□□□□□ -1.37
PBRM1-201ENST00000296302 GCN1Q92616 2671 aaKnown RBP6.5□□□□□ -1.37
PBRM1-201ENST00000296302 HELZ2Q9BYK8 2649 aaKnown RBP6.49□□□□□ -1.37
PBRM1-201ENST00000296302 NBEAL1Q6ZS30 2694 aa6.49□□□□□ -1.37
PBRM1-201ENST00000296302 PCNTO95613 3336 aa6.49□□□□□ -1.37
PBRM1-201ENST00000296302 CFAP46Q8IYW2 2715 aa6.48□□□□□ -1.37
PBRM1-201ENST00000296302 R4GN34 69 aa6.46□□□□□ -1.38
PBRM1-201ENST00000296302 STAB1Q9NY15 2570 aa6.44□□□□□ -1.38
PBRM1-201ENST00000296302 A0A087X002 238 aa6.43□□□□□ -1.38
PBRM1-201ENST00000296302 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
PBRM1-201ENST00000296302 PANO1I0J062 215 aa6.42□□□□□ -1.38
PBRM1-201ENST00000296302 UTRNP46939 3433 aa6.41□□□□□ -1.38
PBRM1-201ENST00000296302 TRANK1O15050 2925 aa6.4□□□□□ -1.38
PBRM1-201ENST00000296302 MGAQ8IWI9 3026 aa6.4□□□□□ -1.38
PBRM1-201ENST00000296302 NOTCH1P46531 2555 aa6.4□□□□□ -1.39
PBRM1-201ENST00000296302 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.39
PBRM1-201ENST00000296302 FLG2Q5D862 2391 aaPredicted RBP6.38□□□□□ -1.39
PBRM1-201ENST00000296302 HTTP42858 3142 aa6.38□□□□□ -1.39
PBRM1-201ENST00000296302 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
PBRM1-201ENST00000296302 KRTAP10-1P60331 282 aa6.37□□□□□ -1.39
PBRM1-201ENST00000296302 KRTAP7-1Q8IUC3 87 aa6.36□□□□□ -1.39
PBRM1-201ENST00000296302 TEX15Q9BXT5 2789 aa6.36□□□□□ -1.39
PBRM1-201ENST00000296302 NBEAL2Q6ZNJ1 2754 aa6.36□□□□□ -1.39
PBRM1-201ENST00000296302 A8MU10 97 aa6.35□□□□□ -1.39
PBRM1-201ENST00000296302 ZNF292O60281 2723 aa6.35□□□□□ -1.39
PBRM1-201ENST00000296302 KRTAP11-1Q8IUC1 163 aa6.34□□□□□ -1.39
PBRM1-201ENST00000296302 M0QZ58 72 aa6.34□□□□□ -1.39
PBRM1-201ENST00000296302 KRTAP10-2P60368 255 aa6.34□□□□□ -1.39
PBRM1-201ENST00000296302 ADM2Q7Z4H4 148 aa6.33□□□□□ -1.4
PBRM1-201ENST00000296302 KRTAP16-1A8MUX0 517 aa6.32□□□□□ -1.4
PBRM1-201ENST00000296302 SEC61BP60468 96 aaKnown RBP6.31□□□□□ -1.4
PBRM1-201ENST00000296302 TEP1Q99973 2627 aaKnown RBP6.3□□□□□ -1.4
PBRM1-201ENST00000296302 KRTAP13-1Q8IUC0 172 aa6.29□□□□□ -1.4
PBRM1-201ENST00000296302 RANBP2P49792 3224 aaKnown RBP6.29□□□□□ -1.4
PBRM1-201ENST00000296302 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
PBRM1-201ENST00000296302 LAMA2P24043 3122 aaKnown RBP6.29□□□□□ -1.4
PBRM1-201ENST00000296302 COL6A5A8TX70 2615 aa6.29□□□□□ -1.4
PBRM1-201ENST00000296302 M0R2T5 61 aa6.26□□□□□ -1.41
PBRM1-201ENST00000296302 SETXQ7Z333 2677 aaKnown RBP6.26□□□□□ -1.41
PBRM1-201ENST00000296302 Q6ZRN7 208 aaPredicted RBP6.24□□□□□ -1.41
PBRM1-201ENST00000296302 FRYQ5TBA9 3013 aa6.23□□□□□ -1.41
PBRM1-201ENST00000296302 Q5VSD8 79 aa6.22□□□□□ -1.41
PBRM1-201ENST00000296302 WDFY4Q6ZS81 3184 aa6.22□□□□□ -1.41
PBRM1-201ENST00000296302 MAP1AP78559 2803 aaPredicted RBP6.21□□□□□ -1.42
PBRM1-201ENST00000296302 MKI67P46013 3256 aaKnown RBP6.2□□□□□ -1.42
PBRM1-201ENST00000296302 UBR5O95071 2799 aaPredicted RBP6.2□□□□□ -1.42
PBRM1-201ENST00000296302 TRIOO75962 3097 aa6.2□□□□□ -1.42
PBRM1-201ENST00000296302 STAB2Q8WWQ8 2551 aa6.19□□□□□ -1.42
PBRM1-201ENST00000296302 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
PBRM1-201ENST00000296302 NDUFAF8A1L188 74 aa6.17□□□□□ -1.42
PBRM1-201ENST00000296302 BAHCC1Q9P281 2608 aa6.16□□□□□ -1.42
PBRM1-201ENST00000296302 LAMA3Q16787 3333 aa6.15□□□□□ -1.43
PBRM1-201ENST00000296302 NSD1Q96L73 2696 aaPredicted RBP6.14□□□□□ -1.43
PBRM1-201ENST00000296302 DSPP15924 2871 aaKnown RBP6.14□□□□□ -1.43
PBRM1-201ENST00000296302 ITPR1Q14643 2758 aa6.13□□□□□ -1.43
PBRM1-201ENST00000296302 VPS13AQ96RL7 3174 aa6.13□□□□□ -1.43
PBRM1-201ENST00000296302 A8MUU9 505 aa6.12□□□□□ -1.43
PBRM1-201ENST00000296302 IGSF10Q6WRI0 2623 aa6.12□□□□□ -1.43
PBRM1-201ENST00000296302 KALRNO60229 2985 aa6.11□□□□□ -1.43
PBRM1-201ENST00000296302 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
PBRM1-201ENST00000296302 FREM2Q5SZK8 3169 aa6.08□□□□□ -1.44
PBRM1-201ENST00000296302 NBEAQ8NFP9 2946 aa6.08□□□□□ -1.44
PBRM1-201ENST00000296302 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
PBRM1-201ENST00000296302 PRUNE2Q8WUY3 3088 aa6.04□□□□□ -1.44
PBRM1-201ENST00000296302 APCP25054 2843 aa6.03□□□□□ -1.44
PBRM1-201ENST00000296302 ITPR2Q14571 2701 aa6.02□□□□□ -1.45
PBRM1-201ENST00000296302 UNC80Q8N2C7 3258 aa6.02□□□□□ -1.45
PBRM1-201ENST00000296302 BRCA2P51587 3418 aa6.01□□□□□ -1.45
PBRM1-201ENST00000296302 XIRP2A4UGR9 3374 aa5.98□□□□□ -1.45
PBRM1-201ENST00000296302 ASH1LQ9NR48 2969 aaKnown RBP5.96□□□□□ -1.45
PBRM1-201ENST00000296302 H0YAA0 97 aa5.96□□□□□ -1.46
PBRM1-201ENST00000296302 UTP20O75691 2785 aaKnown RBP5.96□□□□□ -1.46
PBRM1-201ENST00000296302 KMT2BQ9UMN6 2715 aaPredicted RBP5.95□□□□□ -1.46
PBRM1-201ENST00000296302 FLNCQ14315 2725 aa5.95□□□□□ -1.46
PBRM1-201ENST00000296302 TNP1P09430 55 aa5.93□□□□□ -1.46
PBRM1-201ENST00000296302 TACC2O95359 2948 aa5.93□□□□□ -1.46
PBRM1-201ENST00000296302 NIPBLQ6KC79 2804 aaeCLIP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms