RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 Q8NDZ9 215 aa10□□□□□ -0.81
SSRP1-202ENST00000293880 CR1P17927 2039 aa9.99□□□□□ -0.81
SSRP1-202ENST00000293880 FLNAP21333 2647 aaKnown RBP9.99□□□□□ -0.81
SSRP1-202ENST00000293880 ATRQ13535 2644 aa9.98□□□□□ -0.81
SSRP1-202ENST00000293880 ITPR3Q14573 2671 aa9.98□□□□□ -0.81
SSRP1-202ENST00000293880 MMP24-AS1A0A0U1RRL7 71 aa9.97□□□□□ -0.81
SSRP1-202ENST00000293880 KRTAP16-1A8MUX0 517 aa9.97□□□□□ -0.81
SSRP1-202ENST00000293880 MAST4O15021 2626 aa9.97□□□□□ -0.81
SSRP1-202ENST00000293880 CFAP46Q8IYW2 2715 aa9.96□□□□□ -0.81
SSRP1-202ENST00000293880 BRCA2P51587 3418 aa9.96□□□□□ -0.81
SSRP1-202ENST00000293880 HTTP42858 3142 aa9.95□□□□□ -0.82
SSRP1-202ENST00000293880 ZCCHC13Q8WW36 166 aaKnown RBP9.91□□□□□ -0.82
SSRP1-202ENST00000293880 ROMO1P60602 79 aa9.9□□□□□ -0.83
SSRP1-202ENST00000293880 Q5W150 140 aa9.9□□□□□ -0.83
SSRP1-202ENST00000293880 CHD9Q3L8U1 2897 aa9.85□□□□□ -0.83
SSRP1-202ENST00000293880 CENPEQ02224 2701 aa9.84□□□□□ -0.83
SSRP1-202ENST00000293880 PRUNE2Q8WUY3 3088 aa9.83□□□□□ -0.84
SSRP1-202ENST00000293880 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
SSRP1-202ENST00000293880 SPATA8Q6RVD6 105 aa9.83□□□□□ -0.84
SSRP1-202ENST00000293880 R4GN34 69 aa9.79□□□□□ -0.84
SSRP1-202ENST00000293880 A0A0C4DFX4 3053 aa9.78□□□□□ -0.84
SSRP1-202ENST00000293880 RPL37P61927 97 aaKnown RBP9.76□□□□□ -0.85
SSRP1-202ENST00000293880 TEP1Q99973 2627 aaKnown RBP9.76□□□□□ -0.85
SSRP1-202ENST00000293880 MGAQ8IWI9 3026 aa9.75□□□□□ -0.85
SSRP1-202ENST00000293880 PLAC8Q9NZF1 115 aa9.72□□□□□ -0.85
SSRP1-202ENST00000293880 NDUFAF8A1L188 74 aa9.72□□□□□ -0.85
SSRP1-202ENST00000293880 LINC00472Q9H8W2 130 aa9.72□□□□□ -0.85
SSRP1-202ENST00000293880 SETXQ7Z333 2677 aaKnown RBP9.71□□□□□ -0.85
SSRP1-202ENST00000293880 KRTAP26-1Q6PEX3 210 aa9.71□□□□□ -0.86
SSRP1-202ENST00000293880 ADM2Q7Z4H4 148 aa9.7□□□□□ -0.86
SSRP1-202ENST00000293880 XIRP2A4UGR9 3374 aa9.68□□□□□ -0.86
SSRP1-202ENST00000293880 CFAP54Q96N23 3096 aa9.67□□□□□ -0.86
SSRP1-202ENST00000293880 WDFY4Q6ZS81 3184 aa9.67□□□□□ -0.86
SSRP1-202ENST00000293880 M0QZ58 72 aa9.66□□□□□ -0.86
SSRP1-202ENST00000293880 SPRR1AP35321 89 aa9.66□□□□□ -0.86
SSRP1-202ENST00000293880 UNC80Q8N2C7 3258 aa9.63□□□□□ -0.87
SSRP1-202ENST00000293880 KRTAP1-5Q9BYS1 174 aa9.62□□□□□ -0.87
SSRP1-202ENST00000293880 TEX15Q9BXT5 2789 aa9.6□□□□□ -0.87
SSRP1-202ENST00000293880 LAMA2P24043 3122 aaKnown RBP9.6□□□□□ -0.87
SSRP1-202ENST00000293880 BAHCC1Q9P281 2608 aa9.6□□□□□ -0.87
SSRP1-202ENST00000293880 C20orf166-AS1Q96NR2 134 aa9.59□□□□□ -0.87
SSRP1-202ENST00000293880 TRANK1O15050 2925 aa9.58□□□□□ -0.88
SSRP1-202ENST00000293880 ZNF292O60281 2723 aa9.58□□□□□ -0.88
SSRP1-202ENST00000293880 PLAC4Q8WY50 150 aa9.58□□□□□ -0.88
SSRP1-202ENST00000293880 CDH23Q9H251 3354 aa9.58□□□□□ -0.88
SSRP1-202ENST00000293880 Q5VSD8 79 aa9.57□□□□□ -0.88
SSRP1-202ENST00000293880 KRTAP25-1Q3LHN0 102 aa9.57□□□□□ -0.88
SSRP1-202ENST00000293880 A8MU10 97 aa9.55□□□□□ -0.88
SSRP1-202ENST00000293880 KRTAP10-2P60368 255 aa9.55□□□□□ -0.88
SSRP1-202ENST00000293880 AKAP13Q12802 2813 aa9.55□□□□□ -0.88
SSRP1-202ENST00000293880 KRTAP10-1P60331 282 aa9.53□□□□□ -0.88
SSRP1-202ENST00000293880 A6NN06 94 aa9.53□□□□□ -0.88
SSRP1-202ENST00000293880 DSPP15924 2871 aaKnown RBP9.53□□□□□ -0.88
SSRP1-202ENST00000293880 Q6ZR54 194 aa9.53□□□□□ -0.88
SSRP1-202ENST00000293880 SPRR1BP22528 89 aa9.5□□□□□ -0.89
SSRP1-202ENST00000293880 STAB1Q9NY15 2570 aa9.49□□□□□ -0.89
SSRP1-202ENST00000293880 PANO1I0J062 215 aa9.48□□□□□ -0.89
SSRP1-202ENST00000293880 COL6A5A8TX70 2615 aa9.46□□□□□ -0.89
SSRP1-202ENST00000293880 CHD6Q8TD26 2715 aa9.45□□□□□ -0.9
SSRP1-202ENST00000293880 A0A087X002 238 aa9.45□□□□□ -0.9
SSRP1-202ENST00000293880 NOTCH2NLQ7Z3S9 236 aa9.45□□□□□ -0.9
SSRP1-202ENST00000293880 TRIOO75962 3097 aa9.44□□□□□ -0.9
SSRP1-202ENST00000293880 SEC61BP60468 96 aaKnown RBP9.42□□□□□ -0.9
SSRP1-202ENST00000293880 LCE6AA0A183 80 aa9.4□□□□□ -0.9
SSRP1-202ENST00000293880 ASB16-AS1Q495Z4 193 aa9.4□□□□□ -0.9
SSRP1-202ENST00000293880 IGSF10Q6WRI0 2623 aa9.39□□□□□ -0.91
SSRP1-202ENST00000293880 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
SSRP1-202ENST00000293880 SZT2Q5T011 3432 aa9.35□□□□□ -0.91
SSRP1-202ENST00000293880 CELSR3Q9NYQ7 3312 aa9.34□□□□□ -0.91
SSRP1-202ENST00000293880 MAP1AP78559 2803 aaPredicted RBP9.34□□□□□ -0.91
SSRP1-202ENST00000293880 KRTAP29-1A8MX34 341 aaPredicted RBP9.33□□□□□ -0.92
SSRP1-202ENST00000293880 VPS13AQ96RL7 3174 aa9.32□□□□□ -0.92
SSRP1-202ENST00000293880 UNC79Q9P2D8 2635 aa9.32□□□□□ -0.92
SSRP1-202ENST00000293880 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
SSRP1-202ENST00000293880 KRTAP4-16G5E9R7 235 aaPredicted RBP9.29□□□□□ -0.92
SSRP1-202ENST00000293880 KRTAP11-1Q8IUC1 163 aa9.29□□□□□ -0.92
SSRP1-202ENST00000293880 NOTCH1P46531 2555 aa9.26□□□□□ -0.93
SSRP1-202ENST00000293880 FRYQ5TBA9 3013 aa9.26□□□□□ -0.93
SSRP1-202ENST00000293880 GCN1Q92616 2671 aaKnown RBP9.22□□□□□ -0.93
SSRP1-202ENST00000293880 A8MUU9 505 aa9.22□□□□□ -0.93
SSRP1-202ENST00000293880 REV3LO60673 3130 aa9.17□□□□□ -0.94
SSRP1-202ENST00000293880 COL6A3P12111 3177 aa9.17□□□□□ -0.94
SSRP1-202ENST00000293880 NBEAL1Q6ZS30 2694 aa9.17□□□□□ -0.94
SSRP1-202ENST00000293880 UBR5O95071 2799 aaPredicted RBP9.15□□□□□ -0.94
SSRP1-202ENST00000293880 VCANP13611 3396 aa9.13□□□□□ -0.95
SSRP1-202ENST00000293880 DNAH14Q0VDD8 3507 aa9.11□□□□□ -0.95
SSRP1-202ENST00000293880 ITPR2Q14571 2701 aa9.1□□□□□ -0.95
SSRP1-202ENST00000293880 FRYLO94915 3013 aa9.09□□□□□ -0.95
SSRP1-202ENST00000293880 DMBT1Q9UGM3 2413 aaPredicted RBP9.09□□□□□ -0.95
SSRP1-202ENST00000293880 LAMA1P25391 3075 aa9.09□□□□□ -0.95
SSRP1-202ENST00000293880 KRTAP7-1Q8IUC3 87 aa9.08□□□□□ -0.96
SSRP1-202ENST00000293880 NBEAL2Q6ZNJ1 2754 aa9.08□□□□□ -0.96
SSRP1-202ENST00000293880 TACC2O95359 2948 aa9.06□□□□□ -0.96
SSRP1-202ENST00000293880 ATMQ13315 3056 aa9.05□□□□□ -0.96
SSRP1-202ENST00000293880 FREM2Q5SZK8 3169 aa9.05□□□□□ -0.96
SSRP1-202ENST00000293880 COL12A1Q99715 3063 aa9.03□□□□□ -0.96
SSRP1-202ENST00000293880 CRYBG3Q68DQ2 2970 aa9.01□□□□□ -0.97
SSRP1-202ENST00000293880 KRTAP13-2Q52LG2 175 aa9□□□□□ -0.97
SSRP1-202ENST00000293880 BOD1L1Q8NFC6 3051 aa9□□□□□ -0.97
SSRP1-202ENST00000293880 ITPR1Q14643 2758 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms