RNA–Protein interactions for RNA: ENST00000292823.6

PCYT1A-201, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 5,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-201ENST00000292823 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
PCYT1A-201ENST00000292823 ANAPC11Q9NYG5 84 aa6.12□□□□□ -1.43
PCYT1A-201ENST00000292823 OXTP01178 125 aa6.11□□□□□ -1.43
PCYT1A-201ENST00000292823 A0A1B0GU33 70 aa6.11□□□□□ -1.43
PCYT1A-201ENST00000292823 LAMA3Q16787 3333 aa6.1□□□□□ -1.43
PCYT1A-201ENST00000292823 Q6ZSA8 131 aa6.1□□□□□ -1.43
PCYT1A-201ENST00000292823 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.1□□□□□ -1.43
PCYT1A-201ENST00000292823 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
PCYT1A-201ENST00000292823 FASNP49327 2511 aaKnown RBP6.08□□□□□ -1.44
PCYT1A-201ENST00000292823 EPG5Q9HCE0 2579 aa6.08□□□□□ -1.44
PCYT1A-201ENST00000292823 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
PCYT1A-201ENST00000292823 FLNAP21333 2647 aaKnown RBP6.08□□□□□ -1.44
PCYT1A-201ENST00000292823 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
PCYT1A-201ENST00000292823 AKAP13Q12802 2813 aa6.06□□□□□ -1.44
PCYT1A-201ENST00000292823 CSAG1Q6PB30 78 aa6.05□□□□□ -1.44
PCYT1A-201ENST00000292823 ROMO1P60602 79 aa6.05□□□□□ -1.44
PCYT1A-201ENST00000292823 PRR26Q8N8Z3 221 aa6.04□□□□□ -1.44
PCYT1A-201ENST00000292823 CDH23Q9H251 3354 aa6.04□□□□□ -1.44
PCYT1A-201ENST00000292823 ZCCHC13Q8WW36 166 aaKnown RBP6.03□□□□□ -1.44
PCYT1A-201ENST00000292823 KRTAP1-5Q9BYS1 174 aa6.03□□□□□ -1.44
PCYT1A-201ENST00000292823 MGAQ8IWI9 3026 aa6.02□□□□□ -1.44
PCYT1A-201ENST00000292823 Q5VV11 94 aa6.02□□□□□ -1.45
PCYT1A-201ENST00000292823 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.45
PCYT1A-201ENST00000292823 Q6ZR54 194 aa6.01□□□□□ -1.45
PCYT1A-201ENST00000292823 MGAM2Q2M2H8 2515 aa6.01□□□□□ -1.45
PCYT1A-201ENST00000292823 ITPR3Q14573 2671 aa6.01□□□□□ -1.45
PCYT1A-201ENST00000292823 LAMA2P24043 3122 aaKnown RBP6□□□□□ -1.45
PCYT1A-201ENST00000292823 UNC80Q8N2C7 3258 aa6□□□□□ -1.45
PCYT1A-201ENST00000292823 R4GN34 69 aa6□□□□□ -1.45
PCYT1A-201ENST00000292823 CFAP54Q96N23 3096 aa5.99□□□□□ -1.45
PCYT1A-201ENST00000292823 ATRQ13535 2644 aa5.99□□□□□ -1.45
PCYT1A-201ENST00000292823 C20orf166-AS1Q96NR2 134 aa5.96□□□□□ -1.45
PCYT1A-201ENST00000292823 Q5W150 140 aa5.96□□□□□ -1.46
PCYT1A-201ENST00000292823 DNAH14Q0VDD8 3507 aa5.95□□□□□ -1.46
PCYT1A-201ENST00000292823 MAST4O15021 2626 aa5.95□□□□□ -1.46
PCYT1A-201ENST00000292823 TRIOO75962 3097 aa5.95□□□□□ -1.46
PCYT1A-201ENST00000292823 Q5VSD8 79 aa5.93□□□□□ -1.46
PCYT1A-201ENST00000292823 S4R3F8 94 aa5.93□□□□□ -1.46
PCYT1A-201ENST00000292823 KRTAP10-1P60331 282 aa5.93□□□□□ -1.46
PCYT1A-201ENST00000292823 SZT2Q5T011 3432 aa5.92□□□□□ -1.46
PCYT1A-201ENST00000292823 KRTAP7-1Q8IUC3 87 aa5.91□□□□□ -1.46
PCYT1A-201ENST00000292823 LAMA1P25391 3075 aa5.91□□□□□ -1.46
PCYT1A-201ENST00000292823 SPTBN5Q9NRC6 3674 aaKnown RBP5.9□□□□□ -1.46
PCYT1A-201ENST00000292823 PRUNE2Q8WUY3 3088 aa5.89□□□□□ -1.47
PCYT1A-201ENST00000292823 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
PCYT1A-201ENST00000292823 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
PCYT1A-201ENST00000292823 STAB1Q9NY15 2570 aa5.88□□□□□ -1.47
PCYT1A-201ENST00000292823 XIRP2A4UGR9 3374 aa5.88□□□□□ -1.47
PCYT1A-201ENST00000292823 HECTD1Q9ULT8 2610 aa5.88□□□□□ -1.47
PCYT1A-201ENST00000292823 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
PCYT1A-201ENST00000292823 RPS29P62273 56 aaKnown RBP5.87□□□□□ -1.47
PCYT1A-201ENST00000292823 VPS13AQ96RL7 3174 aa5.87□□□□□ -1.47
PCYT1A-201ENST00000292823 SEC61BP60468 96 aaKnown RBP5.87□□□□□ -1.47
PCYT1A-201ENST00000292823 DSPP15924 2871 aaKnown RBP5.86□□□□□ -1.47
PCYT1A-201ENST00000292823 Q6ZRN7 208 aaPredicted RBP5.86□□□□□ -1.47
PCYT1A-201ENST00000292823 WDFY4Q6ZS81 3184 aa5.85□□□□□ -1.47
PCYT1A-201ENST00000292823 DMBT1Q9UGM3 2413 aaPredicted RBP5.85□□□□□ -1.47
PCYT1A-201ENST00000292823 PANO1I0J062 215 aa5.85□□□□□ -1.47
PCYT1A-201ENST00000292823 KRTAP13-1Q8IUC0 172 aa5.85□□□□□ -1.47
PCYT1A-201ENST00000292823 RPL37P61927 97 aaKnown RBP5.84□□□□□ -1.47
PCYT1A-201ENST00000292823 FRYQ5TBA9 3013 aa5.84□□□□□ -1.47
PCYT1A-201ENST00000292823 M0QZ58 72 aa5.84□□□□□ -1.48
PCYT1A-201ENST00000292823 CHD6Q8TD26 2715 aa5.83□□□□□ -1.48
PCYT1A-201ENST00000292823 VCANP13611 3396 aa5.82□□□□□ -1.48
PCYT1A-201ENST00000292823 IGSF10Q6WRI0 2623 aa5.82□□□□□ -1.48
PCYT1A-201ENST00000292823 SPATA8Q6RVD6 105 aa5.82□□□□□ -1.48
PCYT1A-201ENST00000292823 KRTAP11-1Q8IUC1 163 aa5.82□□□□□ -1.48
PCYT1A-201ENST00000292823 CFAP46Q8IYW2 2715 aa5.81□□□□□ -1.48
PCYT1A-201ENST00000292823 FLNBO75369 2602 aaKnown RBP5.81□□□□□ -1.48
PCYT1A-201ENST00000292823 HELZ2Q9BYK8 2649 aaKnown RBP5.8□□□□□ -1.48
PCYT1A-201ENST00000292823 REV3LO60673 3130 aa5.8□□□□□ -1.48
PCYT1A-201ENST00000292823 TNRC18O15417 2968 aaPredicted RBP5.79□□□□□ -1.48
PCYT1A-201ENST00000292823 STAB2Q8WWQ8 2551 aa5.78□□□□□ -1.48
PCYT1A-201ENST00000292823 TEX15Q9BXT5 2789 aa5.76□□□□□ -1.49
PCYT1A-201ENST00000292823 P0C880 135 aa5.76□□□□□ -1.49
PCYT1A-201ENST00000292823 GCN1Q92616 2671 aaKnown RBP5.76□□□□□ -1.49
PCYT1A-201ENST00000292823 KMT2BQ9UMN6 2715 aaPredicted RBP5.73□□□□□ -1.49
PCYT1A-201ENST00000292823 A0A087X002 238 aa5.73□□□□□ -1.49
PCYT1A-201ENST00000292823 NOTCH2NLQ7Z3S9 236 aa5.73□□□□□ -1.49
PCYT1A-201ENST00000292823 CELSR3Q9NYQ7 3312 aa5.72□□□□□ -1.49
PCYT1A-201ENST00000292823 LRBAP50851 2863 aa5.72□□□□□ -1.49
PCYT1A-201ENST00000292823 NBEAQ8NFP9 2946 aa5.72□□□□□ -1.49
PCYT1A-201ENST00000292823 CENPEQ02224 2701 aa5.71□□□□□ -1.5
PCYT1A-201ENST00000292823 SETXQ7Z333 2677 aaKnown RBP5.71□□□□□ -1.5
PCYT1A-201ENST00000292823 COL6A3P12111 3177 aa5.7□□□□□ -1.5
PCYT1A-201ENST00000292823 A6NN06 94 aa5.7□□□□□ -1.5
PCYT1A-201ENST00000292823 HRNRQ86YZ3 2850 aaPredicted RBP5.69□□□□□ -1.5
PCYT1A-201ENST00000292823 ZZEF1O43149 2961 aa5.69□□□□□ -1.5
PCYT1A-201ENST00000292823 UNC79Q9P2D8 2635 aa5.69□□□□□ -1.5
PCYT1A-201ENST00000292823 KALRNO60229 2985 aa5.68□□□□□ -1.5
PCYT1A-201ENST00000292823 NBEAL1Q6ZS30 2694 aa5.68□□□□□ -1.5
PCYT1A-201ENST00000292823 ZFHX3Q15911 3703 aa5.68□□□□□ -1.5
PCYT1A-201ENST00000292823 USP34Q70CQ2 3546 aa5.67□□□□□ -1.5
PCYT1A-201ENST00000292823 TEP1Q99973 2627 aaKnown RBP5.67□□□□□ -1.5
PCYT1A-201ENST00000292823 FRYLO94915 3013 aa5.67□□□□□ -1.5
PCYT1A-201ENST00000292823 C10orf95Q9H7T3 257 aa5.66□□□□□ -1.5
PCYT1A-201ENST00000292823 ADGRG4Q8IZF6 3080 aa5.66□□□□□ -1.5
PCYT1A-201ENST00000292823 NOTCH1P46531 2555 aa5.66□□□□□ -1.5
PCYT1A-201ENST00000292823 KRTAP13-2Q52LG2 175 aa5.63□□□□□ -1.51
PCYT1A-201ENST00000292823 ADM2Q7Z4H4 148 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms