RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ERC2-IT1O76042 136 aa3.14□□□□□ -1.91
UBR1-201ENST00000290650 GVQW2A0A096LPI5 108 aaPredicted RBP3.13□□□□□ -1.91
UBR1-201ENST00000290650 HCG22E2RYF7 251 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 TENM4Q6N022 2769 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 C7orf65Q6ZTY9 151 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 SPINK1P00995 79 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 PRR34Q9NV39 138 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 NBDYA0A0U1RRE5 68 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 RTL8CO15255 209 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 PDZD2O15018 2839 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 K7EQZ3 153 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 LINC00336Q6ZUF6 198 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 SPACA4Q8TDM5 124 aa3.13□□□□□ -1.91
UBR1-201ENST00000290650 SPAG11AQ6PDA7 123 aa3.12□□□□□ -1.91
UBR1-201ENST00000290650 LINC00612Q8N6U2 182 aa3.12□□□□□ -1.91
UBR1-201ENST00000290650 Q8N377 158 aa3.12□□□□□ -1.91
UBR1-201ENST00000290650 C16orf90A8MZG2 172 aa3.11□□□□□ -1.91
UBR1-201ENST00000290650 H3BNG1 76 aa3.11□□□□□ -1.91
UBR1-201ENST00000290650 IGLV1-50A0A075B6I6 118 aa3.11□□□□□ -1.91
UBR1-201ENST00000290650 LINC00528Q8N1L1 170 aa3.1□□□□□ -1.91
UBR1-201ENST00000290650 TENM1Q9UKZ4 2725 aa3.1□□□□□ -1.91
UBR1-201ENST00000290650 VWFP04275 2813 aa3.1□□□□□ -1.91
UBR1-201ENST00000290650 hDV103S1A0JD37 113 aa3.1□□□□□ -1.91
UBR1-201ENST00000290650 PRR15Q8IV56 129 aa3.1□□□□□ -1.91
UBR1-201ENST00000290650 IGKV2D-30A0A075B6S6 120 aa3.1□□□□□ -1.91
UBR1-201ENST00000290650 LOC110117498A0A087WWA1 95 aa3.1□□□□□ -1.91
UBR1-201ENST00000290650 IGKV2-30P06310 120 aa3.1□□□□□ -1.91
UBR1-201ENST00000290650 Q8NBF4 154 aa3.1□□□□□ -1.91
UBR1-201ENST00000290650 C1orf64Q8NEQ6 169 aa3.1□□□□□ -1.91
UBR1-201ENST00000290650 TRBV7-4A0A0J9YYF1 115 aa3.09□□□□□ -1.91
UBR1-201ENST00000290650 CYP4F30PQ9H0H9 118 aa3.09□□□□□ -1.91
UBR1-201ENST00000290650 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
UBR1-201ENST00000290650 SMR3BP02814 79 aaPredicted RBP3.09□□□□□ -1.92
UBR1-201ENST00000290650 ATP11AUNQ6ZP68 121 aa3.09□□□□□ -1.92
UBR1-201ENST00000290650 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
UBR1-201ENST00000290650 KCNQ1DNQ9H478 68 aa3.08□□□□□ -1.92
UBR1-201ENST00000290650 OBSCN-AS1Q96MR7 158 aa3.08□□□□□ -1.92
UBR1-201ENST00000290650 PKD1L1Q8TDX9 2849 aa3.08□□□□□ -1.92
UBR1-201ENST00000290650 CSMD3Q7Z407 3707 aa3.07□□□□□ -1.92
UBR1-201ENST00000290650 OTOGQ6ZRI0 2925 aa3.07□□□□□ -1.92
UBR1-201ENST00000290650 RBM12B-AS1Q9P1G2 102 aa3.07□□□□□ -1.92
UBR1-201ENST00000290650 RYR1P21817 5038 aa3.07□□□□□ -1.92
UBR1-201ENST00000290650 IGLV8-61A0A075B6I0 122 aa3.07□□□□□ -1.92
UBR1-201ENST00000290650 AKAP9Q99996 3911 aa3.07□□□□□ -1.92
UBR1-201ENST00000290650 OXTP01178 125 aa3.06□□□□□ -1.92
UBR1-201ENST00000290650 TENM3Q9P273 2699 aa3.05□□□□□ -1.92
UBR1-201ENST00000290650 A0A1W2PNM2 257 aa3.05□□□□□ -1.92
UBR1-201ENST00000290650 H7BZZ5 65 aa3.05□□□□□ -1.92
UBR1-201ENST00000290650 APLNQ9ULZ1 77 aa3.05□□□□□ -1.92
UBR1-201ENST00000290650 A0A087WTM6 91 aa3.04□□□□□ -1.92
UBR1-201ENST00000290650 DSCR10P59022 87 aa3.04□□□□□ -1.92
UBR1-201ENST00000290650 KRTAP1-5Q9BYS1 174 aa3.04□□□□□ -1.92
UBR1-201ENST00000290650 PSORS1C2Q9UIG4 136 aa3.04□□□□□ -1.92
UBR1-201ENST00000290650 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.04□□□□□ -1.92
UBR1-201ENST00000290650 C9orf92A6NGG3 77 aa3.03□□□□□ -1.92
UBR1-201ENST00000290650 TYMSOSQ8TAI1 123 aa3.03□□□□□ -1.92
UBR1-201ENST00000290650 A0A1B0GU69 56 aa3.03□□□□□ -1.93
UBR1-201ENST00000290650 A8MUN3 132 aa3.03□□□□□ -1.93
UBR1-201ENST00000290650 PLA2G1BP04054 148 aaKnown RBP3.03□□□□□ -1.93
UBR1-201ENST00000290650 Q5XG85 94 aa3.03□□□□□ -1.93
UBR1-201ENST00000290650 KLKP1Q107X0 134 aa3.02□□□□□ -1.93
UBR1-201ENST00000290650 Q96NJ1 140 aa3.02□□□□□ -1.93
UBR1-201ENST00000290650 TNP2Q05952 138 aa3.02□□□□□ -1.93
UBR1-201ENST00000290650 C9orf163Q8N9P6 203 aa3.02□□□□□ -1.93
UBR1-201ENST00000290650 LINC00313P59037 77 aa3.02□□□□□ -1.93
UBR1-201ENST00000290650 TRAV22A0A0B4J277 110 aa3.02□□□□□ -1.93
UBR1-201ENST00000290650 A8MWP4 228 aa3.01□□□□□ -1.93
UBR1-201ENST00000290650 H3BPC8 53 aa3.01□□□□□ -1.93
UBR1-201ENST00000290650 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
UBR1-201ENST00000290650 TLX1NBP0CAT3 122 aa3□□□□□ -1.93
UBR1-201ENST00000290650 LOC101927531A0A1B0GV80 90 aa3□□□□□ -1.93
UBR1-201ENST00000290650 WWC2-AS2Q96NR7 200 aa3□□□□□ -1.93
UBR1-201ENST00000290650 ZNF861PO60384 105 aa2.99□□□□□ -1.93
UBR1-201ENST00000290650 CDC42SE1Q9NRR8 79 aa2.99□□□□□ -1.93
UBR1-201ENST00000290650 TENM2Q9NT68 2774 aa2.99□□□□□ -1.93
UBR1-201ENST00000290650 PANO1I0J062 215 aa2.98□□□□□ -1.93
UBR1-201ENST00000290650 FP248Q71RG6 208 aaPredicted RBP2.98□□□□□ -1.93
UBR1-201ENST00000290650 KRTAP26-1Q6PEX3 210 aa2.98□□□□□ -1.93
UBR1-201ENST00000290650 C8orf17Q9NRJ1 99 aa2.98□□□□□ -1.93
UBR1-201ENST00000290650 PLA2G2DQ9UNK4 145 aa2.98□□□□□ -1.93
UBR1-201ENST00000290650 CNBPP62633 177 aaKnown RBP2.97□□□□□ -1.93
UBR1-201ENST00000290650 FAM229BQ4G0N7 80 aa2.97□□□□□ -1.93
UBR1-201ENST00000290650 SPRR4Q96PI1 79 aa2.97□□□□□ -1.93
UBR1-201ENST00000290650 MRPL34Q9BQ48 92 aaKnown RBP2.97□□□□□ -1.93
UBR1-201ENST00000290650 COA5Q86WW8 74 aa2.97□□□□□ -1.93
UBR1-201ENST00000290650 SSBP3-AS1Q7Z2R9 100 aa2.97□□□□□ -1.93
UBR1-201ENST00000290650 IGLV7-43P04211 117 aa2.97□□□□□ -1.93
UBR1-201ENST00000290650 ANK3Q12955 4377 aaKnown RBP2.96□□□□□ -1.93
UBR1-201ENST00000290650 IGLV5-48A0A075B6I7 105 aa2.96□□□□□ -1.93
UBR1-201ENST00000290650 A0A1B0GVX0 72 aa2.96□□□□□ -1.94
UBR1-201ENST00000290650 ACYP2P14621 99 aa2.96□□□□□ -1.94
UBR1-201ENST00000290650 TGP01266 2768 aa2.96□□□□□ -1.94
UBR1-201ENST00000290650 PCLOQ9Y6V0 5065 aa2.96□□□□□ -1.94
UBR1-201ENST00000290650 Q1T7F1 81 aa2.96□□□□□ -1.94
UBR1-201ENST00000290650 OCR1Q9BZK8 76 aa2.96□□□□□ -1.94
UBR1-201ENST00000290650 TP53AIP1Q9HCN2 124 aa2.95□□□□□ -1.94
UBR1-201ENST00000290650 A0A1B0GW54 56 aa2.95□□□□□ -1.94
UBR1-201ENST00000290650 UQCR11O14957 56 aa2.95□□□□□ -1.94
UBR1-201ENST00000290650 KRTAP11-1Q8IUC1 163 aa2.95□□□□□ -1.94
UBR1-201ENST00000290650 FLG2Q5D862 2391 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms