RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 UQCR10Q9UDW1 63 aa12.73□□□□□ -0.37
GFRA4-201ENST00000290417 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.72□□□□□ -0.37
GFRA4-201ENST00000290417 LIMD2Q9BT23 127 aa12.72□□□□□ -0.37
GFRA4-201ENST00000290417 LOC105371267A0A1B0GV96 52 aa12.71□□□□□ -0.37
GFRA4-201ENST00000290417 F8WEM9 126 aa12.71□□□□□ -0.37
GFRA4-201ENST00000290417 CD164Q04900 197 aa12.71□□□□□ -0.37
GFRA4-201ENST00000290417 A0A0G2JQZ4 141 aa12.71□□□□□ -0.38
GFRA4-201ENST00000290417 H0YGX0 51 aa12.7□□□□□ -0.38
GFRA4-201ENST00000290417 SNCGO76070 127 aa12.67□□□□□ -0.38
GFRA4-201ENST00000290417 KRTAP13-3Q3SY46 172 aa12.67□□□□□ -0.38
GFRA4-201ENST00000290417 FAM218AQ96MZ4 157 aa12.66□□□□□ -0.38
GFRA4-201ENST00000290417 PPDPFLQ8WWR9 84 aa12.64□□□□□ -0.39
GFRA4-201ENST00000290417 K7ERJ3 54 aa12.63□□□□□ -0.39
GFRA4-201ENST00000290417 TRIAP1O43715 76 aa12.62□□□□□ -0.39
GFRA4-201ENST00000290417 SMIM6P0DI80 62 aa12.62□□□□□ -0.39
GFRA4-201ENST00000290417 SNHG12Q9BXW3 62 aa12.62□□□□□ -0.39
GFRA4-201ENST00000290417 OCIAD2Q56VL3 154 aa12.61□□□□□ -0.39
GFRA4-201ENST00000290417 IGLV8-61A0A075B6I0 122 aa12.6□□□□□ -0.39
GFRA4-201ENST00000290417 Q6JHZ5 121 aa12.59□□□□□ -0.39
GFRA4-201ENST00000290417 PSMB2P49721 201 aa12.58□□□□□ -0.4
GFRA4-201ENST00000290417 Q5XG85 94 aa12.57□□□□□ -0.4
GFRA4-201ENST00000290417 IGFL1Q6UW32 110 aa12.57□□□□□ -0.4
GFRA4-201ENST00000290417 A0A1B0GX51 115 aa12.56□□□□□ -0.4
GFRA4-201ENST00000290417 CLEC2BQ92478 149 aa12.56□□□□□ -0.4
GFRA4-201ENST00000290417 H3BUT2 72 aa12.54□□□□□ -0.4
GFRA4-201ENST00000290417 TCL1BO95988 128 aa12.52□□□□□ -0.41
GFRA4-201ENST00000290417 COX6CP09669 75 aa12.51□□□□□ -0.41
GFRA4-201ENST00000290417 C1orf195Q5TG92 126 aa12.51□□□□□ -0.41
GFRA4-201ENST00000290417 MUC17Q685J3 4493 aa12.5□□□□□ -0.41
GFRA4-201ENST00000290417 GHRHP01286 108 aa12.5□□□□□ -0.41
GFRA4-201ENST00000290417 NDUFV3P56181 108 aaKnown RBP12.5□□□□□ -0.41
GFRA4-201ENST00000290417 FABP2P12104 132 aa12.49□□□□□ -0.41
GFRA4-201ENST00000290417 TRBV7-7A0A0K0K1E9 115 aa12.48□□□□□ -0.41
GFRA4-201ENST00000290417 DNAL4O96015 105 aa12.47□□□□□ -0.41
GFRA4-201ENST00000290417 MUC2Q02817 5179 aa12.46□□□□□ -0.41
GFRA4-201ENST00000290417 XP32Q5T750 250 aa12.45□□□□□ -0.42
GFRA4-201ENST00000290417 C9orf92A6NGG3 77 aa12.45□□□□□ -0.42
GFRA4-201ENST00000290417 ORMDL1Q9P0S3 153 aa12.44□□□□□ -0.42
GFRA4-201ENST00000290417 H3BMG7 143 aa12.43□□□□□ -0.42
GFRA4-201ENST00000290417 M0R143 59 aa12.42□□□□□ -0.42
GFRA4-201ENST00000290417 SCGB1C2P0DMR2 95 aa12.42□□□□□ -0.42
GFRA4-201ENST00000290417 ASB16-AS1Q495Z4 193 aa12.42□□□□□ -0.42
GFRA4-201ENST00000290417 SEC61BP60468 96 aaKnown RBP12.4□□□□□ -0.42
GFRA4-201ENST00000290417 H3BQ85 93 aa12.37□□□□□ -0.43
GFRA4-201ENST00000290417 A0A0U1RQV1 116 aa12.37□□□□□ -0.43
GFRA4-201ENST00000290417 TEN1Q86WV5 123 aa12.37□□□□□ -0.43
GFRA4-201ENST00000290417 TSTD3H0UI37 97 aa12.36□□□□□ -0.43
GFRA4-201ENST00000290417 Q6Q795 121 aa12.36□□□□□ -0.43
GFRA4-201ENST00000290417 A0A1B0GV72 72 aa12.35□□□□□ -0.43
GFRA4-201ENST00000290417 TMEM256-PLSCR3K7ERE1 68 aa12.35□□□□□ -0.43
GFRA4-201ENST00000290417 TRACP01848 142 aa12.35□□□□□ -0.43
GFRA4-201ENST00000290417 LST1O00453 97 aa12.34□□□□□ -0.43
GFRA4-201ENST00000290417 SS18L2Q9UHA2 77 aa12.31□□□□□ -0.44
GFRA4-201ENST00000290417 NAA38Q9BRA0 125 aaKnown RBP12.3□□□□□ -0.44
GFRA4-201ENST00000290417 ANKRD29Q8N6D5 301 aa12.29□□□□□ -0.44
GFRA4-201ENST00000290417 A0A087WSZ3 146 aa12.28□□□□□ -0.44
GFRA4-201ENST00000290417 A0A1W2PNM2 257 aa12.28□□□□□ -0.44
GFRA4-201ENST00000290417 UBE2V1Q13404 147 aa12.28□□□□□ -0.44
GFRA4-201ENST00000290417 KRTAP4-1Q9BYQ7 146 aa12.26□□□□□ -0.45
GFRA4-201ENST00000290417 BATFQ16520 125 aa12.25□□□□□ -0.45
GFRA4-201ENST00000290417 PCOTHQ58A44 107 aa12.22□□□□□ -0.45
GFRA4-201ENST00000290417 BAALC-AS2P0C853 105 aa12.21□□□□□ -0.45
GFRA4-201ENST00000290417 ATXN8Q156A1 80 aa12.2□□□□□ -0.46
GFRA4-201ENST00000290417 TRBV7-4A0A0J9YYF1 115 aa12.2□□□□□ -0.46
GFRA4-201ENST00000290417 FAT4Q6V0I7 4981 aa12.19□□□□□ -0.46
GFRA4-201ENST00000290417 CCKP06307 115 aa12.19□□□□□ -0.46
GFRA4-201ENST00000290417 RPL37P61927 97 aaKnown RBP12.17□□□□□ -0.46
GFRA4-201ENST00000290417 RBM3P98179 157 aaKnown RBP12.17□□□□□ -0.46
GFRA4-201ENST00000290417 Q96NJ1 140 aa12.17□□□□□ -0.46
GFRA4-201ENST00000290417 OBSCN-AS1Q96MR7 158 aa12.16□□□□□ -0.46
GFRA4-201ENST00000290417 LYRM7Q5U5X0 104 aa12.14□□□□□ -0.47
GFRA4-201ENST00000290417 DSCR8Q96T75 97 aa12.13□□□□□ -0.47
GFRA4-201ENST00000290417 VPS25Q9BRG1 176 aa12.13□□□□□ -0.47
GFRA4-201ENST00000290417 SIGMAR1Q99720 223 aa12.1□□□□□ -0.47
GFRA4-201ENST00000290417 TRBV20-1A0A075B6N2 111 aa12.07□□□□□ -0.48
GFRA4-201ENST00000290417 C9JAW5 83 aa12.07□□□□□ -0.48
GFRA4-201ENST00000290417 C9orf118A6NHY6 69 aa12.06□□□□□ -0.48
GFRA4-201ENST00000290417 IGKV4-1P06312 121 aa12.06□□□□□ -0.48
GFRA4-201ENST00000290417 LCE2AQ5TA79 106 aaPredicted RBP12.05□□□□□ -0.48
GFRA4-201ENST00000290417 TAX1BP3O14907 124 aa12.04□□□□□ -0.48
GFRA4-201ENST00000290417 JMJD7-PLA2G4BH0Y9G9 81 aa12.03□□□□□ -0.48
GFRA4-201ENST00000290417 DEFB116Q30KQ4 102 aa12.03□□□□□ -0.48
GFRA4-201ENST00000290417 Q75L30 129 aa12.03□□□□□ -0.48
GFRA4-201ENST00000290417 LINC00472Q9H8W2 130 aa12.03□□□□□ -0.48
GFRA4-201ENST00000290417 DSCR10P59022 87 aa12.01□□□□□ -0.49
GFRA4-201ENST00000290417 A0A1W2PPM0 123 aa12□□□□□ -0.49
GFRA4-201ENST00000290417 PCP4L1A6NKN8 68 aa12□□□□□ -0.49
GFRA4-201ENST00000290417 ATP11AUNQ6ZP68 121 aa11.98□□□□□ -0.49
GFRA4-201ENST00000290417 Q6ZQT0 140 aa11.97□□□□□ -0.49
GFRA4-201ENST00000290417 LOC110117498A0A087WWA1 95 aa11.95□□□□□ -0.5
GFRA4-201ENST00000290417 C21orf62-AS1Q17RA5 79 aa11.95□□□□□ -0.5
GFRA4-201ENST00000290417 C20orf166-AS1Q96NR2 134 aa11.95□□□□□ -0.5
GFRA4-201ENST00000290417 C14orf132Q9NPU4 83 aa11.95□□□□□ -0.5
GFRA4-201ENST00000290417 LINC00313P59037 77 aa11.94□□□□□ -0.5
GFRA4-201ENST00000290417 A8MUU9 505 aa11.92□□□□□ -0.5
GFRA4-201ENST00000290417 PDE6GP18545 87 aa11.92□□□□□ -0.5
GFRA4-201ENST00000290417 MTURNQ8N3F0 131 aa11.92□□□□□ -0.5
GFRA4-201ENST00000290417 IGHV6-1A0A0B4J1U7 121 aa11.91□□□□□ -0.5
GFRA4-201ENST00000290417 H3BT86 120 aa11.89□□□□□ -0.51
GFRA4-201ENST00000290417 KRTAP19-2Q3LHN2 52 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms