RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 HELZ2Q9BYK8 2649 aaKnown RBP11.01□□□□□ -0.65
PCDHA13-201ENST00000289272 VPS13AQ96RL7 3174 aa10.98□□□□□ -0.65
PCDHA13-201ENST00000289272 COX6B2Q6YFQ2 88 aa10.97□□□□□ -0.65
PCDHA13-201ENST00000289272 XIRP2A4UGR9 3374 aa10.96□□□□□ -0.65
PCDHA13-201ENST00000289272 HRES1P13985 223 aa10.96□□□□□ -0.66
PCDHA13-201ENST00000289272 PSORS1C2Q9UIG4 136 aa10.96□□□□□ -0.66
PCDHA13-201ENST00000289272 H3BS24 57 aa10.94□□□□□ -0.66
PCDHA13-201ENST00000289272 Q8NDZ9 215 aa10.93□□□□□ -0.66
PCDHA13-201ENST00000289272 LINC00472Q9H8W2 130 aa10.93□□□□□ -0.66
PCDHA13-201ENST00000289272 ZCCHC13Q8WW36 166 aaKnown RBP10.9□□□□□ -0.66
PCDHA13-201ENST00000289272 A0A1B0GU33 70 aa10.89□□□□□ -0.67
PCDHA13-201ENST00000289272 MAST4O15021 2626 aa10.88□□□□□ -0.67
PCDHA13-201ENST00000289272 TNP2Q05952 138 aa10.87□□□□□ -0.67
PCDHA13-201ENST00000289272 DMAC1Q96GE9 116 aa10.87□□□□□ -0.67
PCDHA13-201ENST00000289272 DSPP15924 2871 aaKnown RBP10.86□□□□□ -0.67
PCDHA13-201ENST00000289272 SPINK7P58062 85 aa10.85□□□□□ -0.67
PCDHA13-201ENST00000289272 ANAPC11Q9NYG5 84 aa10.83□□□□□ -0.68
PCDHA13-201ENST00000289272 FRYQ5TBA9 3013 aa10.83□□□□□ -0.68
PCDHA13-201ENST00000289272 LAMA1P25391 3075 aa10.82□□□□□ -0.68
PCDHA13-201ENST00000289272 LCE6AA0A183 80 aa10.82□□□□□ -0.68
PCDHA13-201ENST00000289272 CHD6Q8TD26 2715 aa10.81□□□□□ -0.68
PCDHA13-201ENST00000289272 PRAC1Q96KF2 57 aa10.81□□□□□ -0.68
PCDHA13-201ENST00000289272 C9orf92A6NGG3 77 aa10.8□□□□□ -0.68
PCDHA13-201ENST00000289272 SMR3BP02814 79 aaPredicted RBP10.8□□□□□ -0.68
PCDHA13-201ENST00000289272 SZT2Q5T011 3432 aa10.8□□□□□ -0.68
PCDHA13-201ENST00000289272 Q6ZR54 194 aa10.8□□□□□ -0.68
PCDHA13-201ENST00000289272 Q8N1X5 172 aa10.77□□□□□ -0.69
PCDHA13-201ENST00000289272 LUZP6Q538Z0 58 aa10.76□□□□□ -0.69
PCDHA13-201ENST00000289272 CSAG1Q6PB30 78 aa10.76□□□□□ -0.69
PCDHA13-201ENST00000289272 KRTAP29-1A8MX34 341 aaPredicted RBP10.75□□□□□ -0.69
PCDHA13-201ENST00000289272 MAP1AP78559 2803 aaPredicted RBP10.75□□□□□ -0.69
PCDHA13-201ENST00000289272 IGSF10Q6WRI0 2623 aa10.73□□□□□ -0.69
PCDHA13-201ENST00000289272 VCANP13611 3396 aa10.72□□□□□ -0.69
PCDHA13-201ENST00000289272 GCN1Q92616 2671 aaKnown RBP10.72□□□□□ -0.69
PCDHA13-201ENST00000289272 A0A087X002 238 aa10.72□□□□□ -0.69
PCDHA13-201ENST00000289272 Q5W150 140 aa10.72□□□□□ -0.69
PCDHA13-201ENST00000289272 DNAH14Q0VDD8 3507 aa10.71□□□□□ -0.69
PCDHA13-201ENST00000289272 KRTAP26-1Q6PEX3 210 aa10.71□□□□□ -0.7
PCDHA13-201ENST00000289272 PLAC8Q9NZF1 115 aa10.7□□□□□ -0.7
PCDHA13-201ENST00000289272 CELSR3Q9NYQ7 3312 aa10.7□□□□□ -0.7
PCDHA13-201ENST00000289272 A6NN06 94 aa10.7□□□□□ -0.7
PCDHA13-201ENST00000289272 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.67□□□□□ -0.7
PCDHA13-201ENST00000289272 KRTAP4-16G5E9R7 235 aaPredicted RBP10.66□□□□□ -0.7
PCDHA13-201ENST00000289272 NBEAQ8NFP9 2946 aa10.64□□□□□ -0.71
PCDHA13-201ENST00000289272 SPATA8Q6RVD6 105 aa10.64□□□□□ -0.71
PCDHA13-201ENST00000289272 UNC79Q9P2D8 2635 aa10.62□□□□□ -0.71
PCDHA13-201ENST00000289272 TEX15Q9BXT5 2789 aa10.62□□□□□ -0.71
PCDHA13-201ENST00000289272 A0A0D9SG42 100 aa10.61□□□□□ -0.71
PCDHA13-201ENST00000289272 LINC00483Q53H64 154 aa10.6□□□□□ -0.71
PCDHA13-201ENST00000289272 SETXQ7Z333 2677 aaKnown RBP10.57□□□□□ -0.72
PCDHA13-201ENST00000289272 ROMO1P60602 79 aa10.54□□□□□ -0.72
PCDHA13-201ENST00000289272 A0A0A0MQY5 61 aa10.54□□□□□ -0.72
PCDHA13-201ENST00000289272 KRTAP1-5Q9BYS1 174 aa10.54□□□□□ -0.72
PCDHA13-201ENST00000289272 NBEAL2Q6ZNJ1 2754 aa10.54□□□□□ -0.72
PCDHA13-201ENST00000289272 KALRNO60229 2985 aa10.53□□□□□ -0.72
PCDHA13-201ENST00000289272 TEP1Q99973 2627 aaKnown RBP10.52□□□□□ -0.72
PCDHA13-201ENST00000289272 ADGRG4Q8IZF6 3080 aa10.51□□□□□ -0.73
PCDHA13-201ENST00000289272 Q6ZSA8 131 aa10.49□□□□□ -0.73
PCDHA13-201ENST00000289272 FLNCQ14315 2725 aa10.48□□□□□ -0.73
PCDHA13-201ENST00000289272 ATMQ13315 3056 aa10.48□□□□□ -0.73
PCDHA13-201ENST00000289272 BOD1L1Q8NFC6 3051 aa10.48□□□□□ -0.73
PCDHA13-201ENST00000289272 RPL37P61927 97 aaKnown RBP10.48□□□□□ -0.73
PCDHA13-201ENST00000289272 FRYLO94915 3013 aa10.47□□□□□ -0.73
PCDHA13-201ENST00000289272 H1FX-AS1Q4G0G2 97 aa10.47□□□□□ -0.73
PCDHA13-201ENST00000289272 NOTCH1P46531 2555 aa10.47□□□□□ -0.73
PCDHA13-201ENST00000289272 COL6A5A8TX70 2615 aa10.47□□□□□ -0.73
PCDHA13-201ENST00000289272 UBR5O95071 2799 aaPredicted RBP10.43□□□□□ -0.74
PCDHA13-201ENST00000289272 LRBAP50851 2863 aa10.42□□□□□ -0.74
PCDHA13-201ENST00000289272 STAB1Q9NY15 2570 aa10.41□□□□□ -0.74
PCDHA13-201ENST00000289272 COL6A3P12111 3177 aa10.39□□□□□ -0.75
PCDHA13-201ENST00000289272 FREM2Q5SZK8 3169 aa10.39□□□□□ -0.75
PCDHA13-201ENST00000289272 ITPR1Q14643 2758 aa10.38□□□□□ -0.75
PCDHA13-201ENST00000289272 S4R3F8 94 aa10.37□□□□□ -0.75
PCDHA13-201ENST00000289272 DMXL2Q8TDJ6 3036 aa10.36□□□□□ -0.75
PCDHA13-201ENST00000289272 KRTAP25-1Q3LHN0 102 aa10.35□□□□□ -0.75
PCDHA13-201ENST00000289272 COL12A1Q99715 3063 aa10.34□□□□□ -0.75
PCDHA13-201ENST00000289272 NBEAL1Q6ZS30 2694 aa10.34□□□□□ -0.75
PCDHA13-201ENST00000289272 CAMK2N1Q7Z7J9 78 aa10.34□□□□□ -0.75
PCDHA13-201ENST00000289272 SPTBN5Q9NRC6 3674 aaKnown RBP10.31□□□□□ -0.76
PCDHA13-201ENST00000289272 REV3LO60673 3130 aa10.3□□□□□ -0.76
PCDHA13-201ENST00000289272 M0R2T5 61 aa10.27□□□□□ -0.77
PCDHA13-201ENST00000289272 TNRC18O15417 2968 aaPredicted RBP10.26□□□□□ -0.77
PCDHA13-201ENST00000289272 KRTAP10-1P60331 282 aa10.26□□□□□ -0.77
PCDHA13-201ENST00000289272 UTP20O75691 2785 aaKnown RBP10.25□□□□□ -0.77
PCDHA13-201ENST00000289272 TACC2O95359 2948 aa10.24□□□□□ -0.77
PCDHA13-201ENST00000289272 ITPR2Q14571 2701 aa10.24□□□□□ -0.77
PCDHA13-201ENST00000289272 PANO1I0J062 215 aa10.24□□□□□ -0.77
PCDHA13-201ENST00000289272 Q5VSD8 79 aa10.24□□□□□ -0.77
PCDHA13-201ENST00000289272 SPEGQ15772 3267 aa10.24□□□□□ -0.77
PCDHA13-201ENST00000289272 KRTAP16-1A8MUX0 517 aa10.22□□□□□ -0.77
PCDHA13-201ENST00000289272 SEC61BP60468 96 aaKnown RBP10.22□□□□□ -0.77
PCDHA13-201ENST00000289272 KRTAP10-2P60368 255 aa10.2□□□□□ -0.78
PCDHA13-201ENST00000289272 KRTAP21-3Q3LHN1 58 aa10.18□□□□□ -0.78
PCDHA13-201ENST00000289272 KRTAP7-1Q8IUC3 87 aa10.16□□□□□ -0.78
PCDHA13-201ENST00000289272 NSD1Q96L73 2696 aaPredicted RBP10.16□□□□□ -0.78
PCDHA13-201ENST00000289272 RPS29P62273 56 aaKnown RBP10.15□□□□□ -0.78
PCDHA13-201ENST00000289272 ZZEF1O43149 2961 aa10.15□□□□□ -0.78
PCDHA13-201ENST00000289272 EYSQ5T1H1 3165 aa10.12□□□□□ -0.79
PCDHA13-201ENST00000289272 BAHCC1Q9P281 2608 aa10.11□□□□□ -0.79
PCDHA13-201ENST00000289272 HRNRQ86YZ3 2850 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms