RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HIGD1BQ9P298 99 aa5.21□□□□□ -1.58
HMGN1-201ENST00000288344 TRAV13-2A0A0B4J235 113 aa5.2□□□□□ -1.58
HMGN1-201ENST00000288344 COX7BP24311 80 aa5.2□□□□□ -1.58
HMGN1-201ENST00000288344 A0A1B0GWB2 263 aa5.19□□□□□ -1.58
HMGN1-201ENST00000288344 A6NDN8 102 aa5.19□□□□□ -1.58
HMGN1-201ENST00000288344 HINT1P49773 126 aaPredicted RBP5.19□□□□□ -1.58
HMGN1-201ENST00000288344 RPS29P62273 56 aaKnown RBP5.19□□□□□ -1.58
HMGN1-201ENST00000288344 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
HMGN1-201ENST00000288344 SPINK1P00995 79 aa5.18□□□□□ -1.58
HMGN1-201ENST00000288344 CFC1BP0CG36 223 aa5.18□□□□□ -1.58
HMGN1-201ENST00000288344 CFC1P0CG37 223 aa5.18□□□□□ -1.58
HMGN1-201ENST00000288344 SPATA45Q537H7 98 aa5.18□□□□□ -1.58
HMGN1-201ENST00000288344 PAM16Q9Y3D7 125 aa5.18□□□□□ -1.58
HMGN1-201ENST00000288344 MOBPQ13875 183 aa5.17□□□□□ -1.58
HMGN1-201ENST00000288344 PRR4Q16378 134 aa5.17□□□□□ -1.58
HMGN1-201ENST00000288344 Q8N377 158 aa5.17□□□□□ -1.58
HMGN1-201ENST00000288344 MPLKIPQ8TAP9 179 aa5.17□□□□□ -1.58
HMGN1-201ENST00000288344 RETNLBQ9BQ08 111 aa5.17□□□□□ -1.58
HMGN1-201ENST00000288344 LINC00575Q6W349 94 aa5.16□□□□□ -1.58
HMGN1-201ENST00000288344 VAMP8Q9BV40 100 aa5.16□□□□□ -1.58
HMGN1-201ENST00000288344 IGLV9-49A0A0B4J1Y8 123 aa5.15□□□□□ -1.59
HMGN1-201ENST00000288344 TEX49A0A1B0GTD5 131 aa5.15□□□□□ -1.59
HMGN1-201ENST00000288344 TPRXLQ17RH7 258 aa5.15□□□□□ -1.59
HMGN1-201ENST00000288344 SLC25A34Q6PIV7 304 aa5.15□□□□□ -1.59
HMGN1-201ENST00000288344 HIST1H4GQ99525 98 aa5.15□□□□□ -1.59
HMGN1-201ENST00000288344 TAL2Q16559 108 aa5.14□□□□□ -1.59
HMGN1-201ENST00000288344 IGLV7-46A0A075B6I9 117 aa5.13□□□□□ -1.59
HMGN1-201ENST00000288344 A0A0B4J2C4 111 aa5.13□□□□□ -1.59
HMGN1-201ENST00000288344 KRTAP13-3Q3SY46 172 aa5.13□□□□□ -1.59
HMGN1-201ENST00000288344 FP248Q71RG6 208 aaPredicted RBP5.13□□□□□ -1.59
HMGN1-201ENST00000288344 CEND1Q8N111 149 aa5.13□□□□□ -1.59
HMGN1-201ENST00000288344 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
HMGN1-201ENST00000288344 FXYD2P54710 66 aa5.12□□□□□ -1.59
HMGN1-201ENST00000288344 CD164Q04900 197 aa5.11□□□□□ -1.59
HMGN1-201ENST00000288344 Q5XG85 94 aa5.11□□□□□ -1.59
HMGN1-201ENST00000288344 C12orf57Q99622 126 aa5.11□□□□□ -1.59
HMGN1-201ENST00000288344 LAMTOR3Q9UHA4 124 aa5.11□□□□□ -1.59
HMGN1-201ENST00000288344 IGLV8-61A0A075B6I0 122 aa5.1□□□□□ -1.59
HMGN1-201ENST00000288344 Q1RN00 199 aa5.1□□□□□ -1.59
HMGN1-201ENST00000288344 DEFB105AQ8NG35 78 aa5.1□□□□□ -1.59
HMGN1-201ENST00000288344 A0A0G2JQZ4 141 aa5.09□□□□□ -1.59
HMGN1-201ENST00000288344 hADV29S1A0JD25 119 aa5.09□□□□□ -1.59
HMGN1-201ENST00000288344 VAMP3Q15836 100 aa5.09□□□□□ -1.59
HMGN1-201ENST00000288344 FAM218AQ96MZ4 157 aa5.09□□□□□ -1.59
HMGN1-201ENST00000288344 NHP2Q9NX24 153 aaKnown RBP5.09□□□□□ -1.59
HMGN1-201ENST00000288344 SLC25A20O43772 301 aa5.08□□□□□ -1.6
HMGN1-201ENST00000288344 C9orf153Q5TBE3 101 aa5.08□□□□□ -1.6
HMGN1-201ENST00000288344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.08□□□□□ -1.6
HMGN1-201ENST00000288344 Q6ZQY7 126 aa5.08□□□□□ -1.6
HMGN1-201ENST00000288344 PRO1933Q9H354 126 aa5.08□□□□□ -1.6
HMGN1-201ENST00000288344 BVES-AS1Q5T3Y7 98 aa5.07□□□□□ -1.6
HMGN1-201ENST00000288344 PRO1854Q9UHT4 67 aa5.07□□□□□ -1.6
HMGN1-201ENST00000288344 H0YGX0 51 aa5.05□□□□□ -1.6
HMGN1-201ENST00000288344 HSD52Q0P140 79 aa5.05□□□□□ -1.6
HMGN1-201ENST00000288344 PPDPFLQ8WWR9 84 aa5.05□□□□□ -1.6
HMGN1-201ENST00000288344 UQCR10Q9UDW1 63 aa5.05□□□□□ -1.6
HMGN1-201ENST00000288344 OCIAD2Q56VL3 154 aa5.04□□□□□ -1.6
HMGN1-201ENST00000288344 RAB37Q96AX2 223 aa5.04□□□□□ -1.6
HMGN1-201ENST00000288344 A0A1B0GX51 115 aa5.03□□□□□ -1.6
HMGN1-201ENST00000288344 H7C2G1 150 aa5.03□□□□□ -1.6
HMGN1-201ENST00000288344 C1orf195Q5TG92 126 aa5.03□□□□□ -1.6
HMGN1-201ENST00000288344 IGFL1Q6UW32 110 aa5.03□□□□□ -1.6
HMGN1-201ENST00000288344 HRCT1Q6UXD1 115 aa5.03□□□□□ -1.6
HMGN1-201ENST00000288344 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
HMGN1-201ENST00000288344 SEC61BP60468 96 aaKnown RBP5.02□□□□□ -1.61
HMGN1-201ENST00000288344 ASB16-AS1Q495Z4 193 aa5.02□□□□□ -1.61
HMGN1-201ENST00000288344 LOC105371267A0A1B0GV96 52 aa5.01□□□□□ -1.61
HMGN1-201ENST00000288344 K7ERJ3 54 aa5.01□□□□□ -1.61
HMGN1-201ENST00000288344 UBE2V1Q13404 147 aa5.01□□□□□ -1.61
HMGN1-201ENST00000288344 Q6JHZ5 121 aa5□□□□□ -1.61
HMGN1-201ENST00000288344 Q75L30 129 aa5□□□□□ -1.61
HMGN1-201ENST00000288344 LIMD2Q9BT23 127 aa5□□□□□ -1.61
HMGN1-201ENST00000288344 Q6Q795 121 aa4.99□□□□□ -1.61
HMGN1-201ENST00000288344 TRBV7-7A0A0K0K1E9 115 aa4.98□□□□□ -1.61
HMGN1-201ENST00000288344 CLEC2BQ92478 149 aa4.98□□□□□ -1.61
HMGN1-201ENST00000288344 SMIM6P0DI80 62 aa4.97□□□□□ -1.61
HMGN1-201ENST00000288344 NDUFV3P56181 108 aaKnown RBP4.97□□□□□ -1.61
HMGN1-201ENST00000288344 H3BUT2 72 aa4.97□□□□□ -1.61
HMGN1-201ENST00000288344 SNHG12Q9BXW3 62 aa4.97□□□□□ -1.61
HMGN1-201ENST00000288344 A0A1W2PNM2 257 aa4.95□□□□□ -1.62
HMGN1-201ENST00000288344 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
HMGN1-201ENST00000288344 F8WEM9 126 aa4.94□□□□□ -1.62
HMGN1-201ENST00000288344 LST1O00453 97 aa4.94□□□□□ -1.62
HMGN1-201ENST00000288344 TRACP01848 142 aa4.94□□□□□ -1.62
HMGN1-201ENST00000288344 Q96NJ1 140 aa4.94□□□□□ -1.62
HMGN1-201ENST00000288344 H3BMG7 143 aa4.93□□□□□ -1.62
HMGN1-201ENST00000288344 TCL1BO95988 128 aa4.93□□□□□ -1.62
HMGN1-201ENST00000288344 TEN1Q86WV5 123 aa4.93□□□□□ -1.62
HMGN1-201ENST00000288344 SNCGO76070 127 aa4.92□□□□□ -1.62
HMGN1-201ENST00000288344 C9orf92A6NGG3 77 aa4.91□□□□□ -1.62
HMGN1-201ENST00000288344 H3BQ85 93 aa4.91□□□□□ -1.62
HMGN1-201ENST00000288344 TMEM256-PLSCR3K7ERE1 68 aa4.91□□□□□ -1.62
HMGN1-201ENST00000288344 COX6CP09669 75 aa4.91□□□□□ -1.62
HMGN1-201ENST00000288344 PSMB2P49721 201 aa4.91□□□□□ -1.62
HMGN1-201ENST00000288344 ORMDL1Q9P0S3 153 aa4.91□□□□□ -1.62
HMGN1-201ENST00000288344 FABP2P12104 132 aa4.9□□□□□ -1.63
HMGN1-201ENST00000288344 TRBV7-4A0A0J9YYF1 115 aa4.89□□□□□ -1.63
HMGN1-201ENST00000288344 M0R143 59 aa4.88□□□□□ -1.63
HMGN1-201ENST00000288344 RPL37P61927 97 aaKnown RBP4.88□□□□□ -1.63
HMGN1-201ENST00000288344 A0A087WSZ3 146 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms