RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 A0A1W2PNN7 141 aa8.29□□□□□ -1.08
SLC6A1-201ENST00000287766 PRR34Q9NV39 138 aa8.29□□□□□ -1.08
SLC6A1-201ENST00000287766 MOBPQ13875 183 aa8.28□□□□□ -1.08
SLC6A1-201ENST00000287766 LINC01600Q96MT4 127 aa8.28□□□□□ -1.08
SLC6A1-201ENST00000287766 LINC00588Q9Y4M8 146 aa8.28□□□□□ -1.08
SLC6A1-201ENST00000287766 Q8NDZ9 215 aa8.26□□□□□ -1.09
SLC6A1-201ENST00000287766 LINC00528Q8N1L1 170 aa8.26□□□□□ -1.09
SLC6A1-201ENST00000287766 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
SLC6A1-201ENST00000287766 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
SLC6A1-201ENST00000287766 SPINT4Q6UDR6 99 aa8.24□□□□□ -1.09
SLC6A1-201ENST00000287766 NIPBLQ6KC79 2804 aaeCLIP8.24□□□□□ -1.09
SLC6A1-201ENST00000287766 Q5XG85 94 aa8.24□□□□□ -1.09
SLC6A1-201ENST00000287766 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
SLC6A1-201ENST00000287766 LCA10Q71F78 164 aa8.23□□□□□ -1.09
SLC6A1-201ENST00000287766 CHTF8P0CG12 524 aa8.23□□□□□ -1.09
SLC6A1-201ENST00000287766 H3BNG1 76 aa8.22□□□□□ -1.09
SLC6A1-201ENST00000287766 SSBP3-AS1Q7Z2R9 100 aa8.22□□□□□ -1.09
SLC6A1-201ENST00000287766 LY6G6CO95867 125 aa8.22□□□□□ -1.09
SLC6A1-201ENST00000287766 CASC10Q5T4H9 136 aa8.22□□□□□ -1.09
SLC6A1-201ENST00000287766 PHF5AQ7RTV0 110 aaKnown RBP8.22□□□□□ -1.09
SLC6A1-201ENST00000287766 UQCR11O14957 56 aa8.22□□□□□ -1.09
SLC6A1-201ENST00000287766 Q8N377 158 aa8.21□□□□□ -1.09
SLC6A1-201ENST00000287766 EPM2AB3EWF7 344 aa8.21□□□□□ -1.1
SLC6A1-201ENST00000287766 A8MWP4 228 aa8.21□□□□□ -1.1
SLC6A1-201ENST00000287766 SPACA4Q8TDM5 124 aa8.2□□□□□ -1.1
SLC6A1-201ENST00000287766 OBSCN-AS1Q96MR7 158 aa8.2□□□□□ -1.1
SLC6A1-201ENST00000287766 FP248Q71RG6 208 aaPredicted RBP8.18□□□□□ -1.1
SLC6A1-201ENST00000287766 PRR15Q8IV56 129 aa8.18□□□□□ -1.1
SLC6A1-201ENST00000287766 IGFL1Q6UW32 110 aa8.17□□□□□ -1.1
SLC6A1-201ENST00000287766 IGLV5-52A0A0A0MRZ9 124 aa8.17□□□□□ -1.1
SLC6A1-201ENST00000287766 DNAH10OSP0CZ25 163 aa8.16□□□□□ -1.1
SLC6A1-201ENST00000287766 MIR22HGQ0VDD5 57 aa8.16□□□□□ -1.1
SLC6A1-201ENST00000287766 RBM12B-AS1Q9P1G2 102 aa8.15□□□□□ -1.1
SLC6A1-201ENST00000287766 KCNQ1DNQ9H478 68 aa8.15□□□□□ -1.1
SLC6A1-201ENST00000287766 A0A1W2PNM2 257 aa8.15□□□□□ -1.11
SLC6A1-201ENST00000287766 MRPL34Q9BQ48 92 aaKnown RBP8.14□□□□□ -1.11
SLC6A1-201ENST00000287766 OCR1Q9BZK8 76 aa8.14□□□□□ -1.11
SLC6A1-201ENST00000287766 FAM229BQ4G0N7 80 aa8.13□□□□□ -1.11
SLC6A1-201ENST00000287766 OXTP01178 125 aa8.12□□□□□ -1.11
SLC6A1-201ENST00000287766 IGLV1-50A0A075B6I6 118 aa8.12□□□□□ -1.11
SLC6A1-201ENST00000287766 LINC00313P59037 77 aa8.12□□□□□ -1.11
SLC6A1-201ENST00000287766 PRR26Q8N8Z3 221 aa8.11□□□□□ -1.11
SLC6A1-201ENST00000287766 K7EIL1 84 aa8.1□□□□□ -1.11
SLC6A1-201ENST00000287766 CDC42SE1Q9NRR8 79 aa8.1□□□□□ -1.11
SLC6A1-201ENST00000287766 Q1T7F1 81 aa8.1□□□□□ -1.11
SLC6A1-201ENST00000287766 C8orf17Q9NRJ1 99 aa8.08□□□□□ -1.12
SLC6A1-201ENST00000287766 CSMD2Q7Z408 3487 aa8.07□□□□□ -1.12
SLC6A1-201ENST00000287766 NUPR2A6NF83 97 aa8.07□□□□□ -1.12
SLC6A1-201ENST00000287766 C16orf90A8MZG2 172 aa8.07□□□□□ -1.12
SLC6A1-201ENST00000287766 FAM229AH3BQW9 127 aa8.06□□□□□ -1.12
SLC6A1-201ENST00000287766 KMT2BQ9UMN6 2715 aaPredicted RBP8.06□□□□□ -1.12
SLC6A1-201ENST00000287766 STAB2Q8WWQ8 2551 aa8.05□□□□□ -1.12
SLC6A1-201ENST00000287766 H3BS24 57 aa8.05□□□□□ -1.12
SLC6A1-201ENST00000287766 BSNQ9UPA5 3926 aa8.04□□□□□ -1.12
SLC6A1-201ENST00000287766 PRAC1Q96KF2 57 aa8.03□□□□□ -1.12
SLC6A1-201ENST00000287766 SPANXA2-OT1Q8N9U9 137 aa8.03□□□□□ -1.12
SLC6A1-201ENST00000287766 NBDYA0A0U1RRE5 68 aa8□□□□□ -1.13
SLC6A1-201ENST00000287766 DSCR10P59022 87 aa8□□□□□ -1.13
SLC6A1-201ENST00000287766 C1orf134Q5TEV5 83 aa8□□□□□ -1.13
SLC6A1-201ENST00000287766 Q96NJ1 140 aa8□□□□□ -1.13
SLC6A1-201ENST00000287766 VWFP04275 2813 aa8□□□□□ -1.13
SLC6A1-201ENST00000287766 A0A1B0GVX0 72 aa7.99□□□□□ -1.13
SLC6A1-201ENST00000287766 IGLV5-48A0A075B6I7 105 aa7.99□□□□□ -1.13
SLC6A1-201ENST00000287766 TENM1Q9UKZ4 2725 aa7.99□□□□□ -1.13
SLC6A1-201ENST00000287766 Q8N9P0 234 aaPredicted RBP7.99□□□□□ -1.13
SLC6A1-201ENST00000287766 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
SLC6A1-201ENST00000287766 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
SLC6A1-201ENST00000287766 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
SLC6A1-201ENST00000287766 LINC01554Q52M75 96 aa7.97□□□□□ -1.13
SLC6A1-201ENST00000287766 TLX1NBP0CAT3 122 aa7.97□□□□□ -1.13
SLC6A1-201ENST00000287766 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
SLC6A1-201ENST00000287766 APLNQ9ULZ1 77 aa7.95□□□□□ -1.14
SLC6A1-201ENST00000287766 RTL8CO15255 209 aa7.93□□□□□ -1.14
SLC6A1-201ENST00000287766 TENM4Q6N022 2769 aa7.93□□□□□ -1.14
SLC6A1-201ENST00000287766 KRTAP26-1Q6PEX3 210 aa7.92□□□□□ -1.14
SLC6A1-201ENST00000287766 Q5VV11 94 aa7.92□□□□□ -1.14
SLC6A1-201ENST00000287766 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
SLC6A1-201ENST00000287766 TENM3Q9P273 2699 aa7.91□□□□□ -1.14
SLC6A1-201ENST00000287766 Q75L30 129 aa7.91□□□□□ -1.14
SLC6A1-201ENST00000287766 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.14
SLC6A1-201ENST00000287766 TYMSOSQ8TAI1 123 aa7.89□□□□□ -1.15
SLC6A1-201ENST00000287766 PDZD2O15018 2839 aa7.88□□□□□ -1.15
SLC6A1-201ENST00000287766 NBPF19A0A087WUL8 3843 aa7.88□□□□□ -1.15
SLC6A1-201ENST00000287766 IGLV7-46A0A075B6I9 117 aa7.88□□□□□ -1.15
SLC6A1-201ENST00000287766 Q8N1X5 172 aa7.88□□□□□ -1.15
SLC6A1-201ENST00000287766 OTOGQ6ZRI0 2925 aa7.86□□□□□ -1.15
SLC6A1-201ENST00000287766 A0A0D9SG42 100 aa7.86□□□□□ -1.15
SLC6A1-201ENST00000287766 SPRR4Q96PI1 79 aa7.86□□□□□ -1.15
SLC6A1-201ENST00000287766 KRTAP1-5Q9BYS1 174 aa7.86□□□□□ -1.15
SLC6A1-201ENST00000287766 SPINK7P58062 85 aa7.85□□□□□ -1.15
SLC6A1-201ENST00000287766 IGLV5-37A0A075B6J1 123 aa7.83□□□□□ -1.16
SLC6A1-201ENST00000287766 LINC01558Q9Y6Z2 57 aa7.83□□□□□ -1.16
SLC6A1-201ENST00000287766 CNBPP62633 177 aaKnown RBP7.82□□□□□ -1.16
SLC6A1-201ENST00000287766 VPS13CQ709C8 3753 aa7.81□□□□□ -1.16
SLC6A1-201ENST00000287766 CSAG1Q6PB30 78 aa7.81□□□□□ -1.16
SLC6A1-201ENST00000287766 A0A087WTM6 91 aa7.8□□□□□ -1.16
SLC6A1-201ENST00000287766 ZNF861PO60384 105 aa7.8□□□□□ -1.16
SLC6A1-201ENST00000287766 SPRR1AP35321 89 aa7.79□□□□□ -1.16
SLC6A1-201ENST00000287766 PSORS1C2Q9UIG4 136 aa7.79□□□□□ -1.16
SLC6A1-201ENST00000287766 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms