RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 B9D2Q9BPU9 175 aa8.62□□□□□ -1.03
SCAF4-201ENST00000286835 KRTAP26-1Q6PEX3 210 aa8.62□□□□□ -1.03
SCAF4-201ENST00000286835 FBN1P35555 2871 aaKnown RBP8.61□□□□□ -1.03
SCAF4-201ENST00000286835 CDK2AP2O75956 126 aa8.61□□□□□ -1.03
SCAF4-201ENST00000286835 NDUFB1O75438 58 aa8.61□□□□□ -1.03
SCAF4-201ENST00000286835 H0Y9P7 68 aa8.61□□□□□ -1.03
SCAF4-201ENST00000286835 DSCR10P59022 87 aa8.6□□□□□ -1.03
SCAF4-201ENST00000286835 CHKB-CPT1BH3BT56 60 aa8.6□□□□□ -1.03
SCAF4-201ENST00000286835 IGLV9-49A0A0B4J1Y8 123 aa8.6□□□□□ -1.03
SCAF4-201ENST00000286835 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
SCAF4-201ENST00000286835 PCOTHQ58A44 107 aa8.59□□□□□ -1.03
SCAF4-201ENST00000286835 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
SCAF4-201ENST00000286835 F8WDY8 70 aa8.59□□□□□ -1.03
SCAF4-201ENST00000286835 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
SCAF4-201ENST00000286835 A8MUN3 132 aa8.57□□□□□ -1.04
SCAF4-201ENST00000286835 PHF5AQ7RTV0 110 aaKnown RBP8.56□□□□□ -1.04
SCAF4-201ENST00000286835 PRR15LQ9BU68 103 aa8.56□□□□□ -1.04
SCAF4-201ENST00000286835 hDV103S1A0JD37 113 aa8.55□□□□□ -1.04
SCAF4-201ENST00000286835 TRRAPQ9Y4A5 3859 aa8.55□□□□□ -1.04
SCAF4-201ENST00000286835 C1orf134Q5TEV5 83 aa8.54□□□□□ -1.04
SCAF4-201ENST00000286835 A0A1B0GW54 56 aa8.53□□□□□ -1.04
SCAF4-201ENST00000286835 PMAIP1Q13794 54 aa8.53□□□□□ -1.04
SCAF4-201ENST00000286835 A6NED7 52 aa8.53□□□□□ -1.04
SCAF4-201ENST00000286835 IGLV5-52A0A0A0MRZ9 124 aa8.52□□□□□ -1.05
SCAF4-201ENST00000286835 TRAV22A0A0B4J277 110 aa8.52□□□□□ -1.05
SCAF4-201ENST00000286835 NBDYA0A0U1RRE5 68 aa8.5□□□□□ -1.05
SCAF4-201ENST00000286835 TLX1NBP0CAT3 122 aa8.5□□□□□ -1.05
SCAF4-201ENST00000286835 SPINK6Q6UWN8 80 aa8.5□□□□□ -1.05
SCAF4-201ENST00000286835 SPRR4Q96PI1 79 aa8.5□□□□□ -1.05
SCAF4-201ENST00000286835 IGHV6-1A0A0B4J1U7 121 aa8.47□□□□□ -1.05
SCAF4-201ENST00000286835 PLA2G2DQ9UNK4 145 aa8.47□□□□□ -1.05
SCAF4-201ENST00000286835 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
SCAF4-201ENST00000286835 SPRR1AP35321 89 aa8.45□□□□□ -1.06
SCAF4-201ENST00000286835 TNP2Q05952 138 aa8.45□□□□□ -1.06
SCAF4-201ENST00000286835 KRTAP4-16G5E9R7 235 aaPredicted RBP8.44□□□□□ -1.06
SCAF4-201ENST00000286835 SEC61GP60059 68 aa8.44□□□□□ -1.06
SCAF4-201ENST00000286835 KRTAP7-1Q8IUC3 87 aa8.42□□□□□ -1.06
SCAF4-201ENST00000286835 PRR15Q8IV56 129 aa8.42□□□□□ -1.06
SCAF4-201ENST00000286835 IGLV5-37A0A075B6J1 123 aa8.42□□□□□ -1.06
SCAF4-201ENST00000286835 WWC2-AS2Q96NR7 200 aa8.42□□□□□ -1.06
SCAF4-201ENST00000286835 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
SCAF4-201ENST00000286835 SPAG11AQ6PDA7 123 aa8.41□□□□□ -1.06
SCAF4-201ENST00000286835 A8MWP4 228 aa8.4□□□□□ -1.06
SCAF4-201ENST00000286835 Q1T7F1 81 aa8.38□□□□□ -1.07
SCAF4-201ENST00000286835 LIMD2Q9BT23 127 aa8.36□□□□□ -1.07
SCAF4-201ENST00000286835 APLNQ9ULZ1 77 aa8.36□□□□□ -1.07
SCAF4-201ENST00000286835 COA5Q86WW8 74 aa8.36□□□□□ -1.07
SCAF4-201ENST00000286835 SRRM2Q9UQ35 2752 aaKnown RBP8.36□□□□□ -1.07
SCAF4-201ENST00000286835 ANK3Q12955 4377 aaKnown RBP8.35□□□□□ -1.07
SCAF4-201ENST00000286835 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
SCAF4-201ENST00000286835 RTL8CO15255 209 aa8.35□□□□□ -1.07
SCAF4-201ENST00000286835 CNBPP62633 177 aaKnown RBP8.35□□□□□ -1.07
SCAF4-201ENST00000286835 MOBPQ13875 183 aa8.35□□□□□ -1.07
SCAF4-201ENST00000286835 RETNLBQ9BQ08 111 aa8.35□□□□□ -1.07
SCAF4-201ENST00000286835 ZCCHC13Q8WW36 166 aaKnown RBP8.34□□□□□ -1.07
SCAF4-201ENST00000286835 KRTAP1-5Q9BYS1 174 aa8.34□□□□□ -1.07
SCAF4-201ENST00000286835 CYP4F30PQ9H0H9 118 aa8.33□□□□□ -1.08
SCAF4-201ENST00000286835 A8MU10 97 aa8.32□□□□□ -1.08
SCAF4-201ENST00000286835 TENM2Q9NT68 2774 aa8.31□□□□□ -1.08
SCAF4-201ENST00000286835 CIRBP-AS1Q8TBR5 109 aa8.31□□□□□ -1.08
SCAF4-201ENST00000286835 H3BPC8 53 aa8.3□□□□□ -1.08
SCAF4-201ENST00000286835 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
SCAF4-201ENST00000286835 ZNF706Q9Y5V0 76 aaPredicted RBP8.29□□□□□ -1.08
SCAF4-201ENST00000286835 Q8N9P0 234 aaPredicted RBP8.27□□□□□ -1.09
SCAF4-201ENST00000286835 Q5VV11 94 aa8.27□□□□□ -1.09
SCAF4-201ENST00000286835 LCE6AA0A183 80 aa8.26□□□□□ -1.09
SCAF4-201ENST00000286835 A0A087WTM6 91 aa8.26□□□□□ -1.09
SCAF4-201ENST00000286835 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
SCAF4-201ENST00000286835 LINC00472Q9H8W2 130 aa8.25□□□□□ -1.09
SCAF4-201ENST00000286835 C9orf163Q8N9P6 203 aa8.25□□□□□ -1.09
SCAF4-201ENST00000286835 SPANXA2-OT1Q8N9U9 137 aa8.24□□□□□ -1.09
SCAF4-201ENST00000286835 MMP24-AS1A0A0U1RRL7 71 aa8.24□□□□□ -1.09
SCAF4-201ENST00000286835 TP53AIP1Q9HCN2 124 aa8.24□□□□□ -1.09
SCAF4-201ENST00000286835 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
SCAF4-201ENST00000286835 IGLV8-61A0A075B6I0 122 aa8.21□□□□□ -1.09
SCAF4-201ENST00000286835 PANO1I0J062 215 aa8.21□□□□□ -1.1
SCAF4-201ENST00000286835 LOC101927531A0A1B0GV80 90 aa8.2□□□□□ -1.1
SCAF4-201ENST00000286835 CSMD3Q7Z407 3707 aa8.2□□□□□ -1.1
SCAF4-201ENST00000286835 MRPL34Q9BQ48 92 aaKnown RBP8.19□□□□□ -1.1
SCAF4-201ENST00000286835 CD164Q04900 197 aa8.19□□□□□ -1.1
SCAF4-201ENST00000286835 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.19□□□□□ -1.1
SCAF4-201ENST00000286835 TGP01266 2768 aa8.19□□□□□ -1.1
SCAF4-201ENST00000286835 A0A1B0GVX0 72 aa8.18□□□□□ -1.1
SCAF4-201ENST00000286835 PRR26Q8N8Z3 221 aa8.18□□□□□ -1.1
SCAF4-201ENST00000286835 IGLV7-46A0A075B6I9 117 aa8.16□□□□□ -1.1
SCAF4-201ENST00000286835 PSORS1C2Q9UIG4 136 aa8.14□□□□□ -1.11
SCAF4-201ENST00000286835 COL7A1Q02388 2944 aa8.14□□□□□ -1.11
SCAF4-201ENST00000286835 SPRR1BP22528 89 aa8.13□□□□□ -1.11
SCAF4-201ENST00000286835 SMR3BP02814 79 aaPredicted RBP8.12□□□□□ -1.11
SCAF4-201ENST00000286835 ATP11AUNQ6ZP68 121 aa8.12□□□□□ -1.11
SCAF4-201ENST00000286835 KTN1-AS1Q86SY8 53 aa8.1□□□□□ -1.11
SCAF4-201ENST00000286835 A0A087X002 238 aa8.09□□□□□ -1.11
SCAF4-201ENST00000286835 LCA10Q71F78 164 aa8.09□□□□□ -1.11
SCAF4-201ENST00000286835 NOTCH2NLQ7Z3S9 236 aa8.09□□□□□ -1.11
SCAF4-201ENST00000286835 IGKV2D-30A0A075B6S6 120 aa8.09□□□□□ -1.11
SCAF4-201ENST00000286835 IGKV2-30P06310 120 aa8.09□□□□□ -1.11
SCAF4-201ENST00000286835 SPINK1P00995 79 aa8.08□□□□□ -1.12
SCAF4-201ENST00000286835 HRES1P13985 223 aa8.08□□□□□ -1.12
SCAF4-201ENST00000286835 Q75L30 129 aa8.08□□□□□ -1.12
SCAF4-201ENST00000286835 SPINK7P58062 85 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms