RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 Q9BRP9 147 aa6.66□□□□□ -1.34
SKA1-201ENST00000285116 NDUFB1O75438 58 aa6.65□□□□□ -1.34
SKA1-201ENST00000285116 K7EQZ3 153 aa6.65□□□□□ -1.35
SKA1-201ENST00000285116 C11orf45Q8TAV5 145 aa6.65□□□□□ -1.35
SKA1-201ENST00000285116 PSPHP1O15172 72 aa6.64□□□□□ -1.35
SKA1-201ENST00000285116 DNAH1Q9P2D7 4330 aa6.64□□□□□ -1.35
SKA1-201ENST00000285116 DNAH3Q8TD57 4116 aa6.63□□□□□ -1.35
SKA1-201ENST00000285116 DNAH7Q8WXX0 4024 aa6.63□□□□□ -1.35
SKA1-201ENST00000285116 HCG22E2RYF7 251 aa6.63□□□□□ -1.35
SKA1-201ENST00000285116 PSCAO43653 123 aa6.63□□□□□ -1.35
SKA1-201ENST00000285116 KRTAP7-1Q8IUC3 87 aa6.63□□□□□ -1.35
SKA1-201ENST00000285116 ST20-AS1Q8NBB2 130 aa6.62□□□□□ -1.35
SKA1-201ENST00000285116 H3BS24 57 aa6.61□□□□□ -1.35
SKA1-201ENST00000285116 HUWE1Q7Z6Z7 4374 aaKnown RBP6.61□□□□□ -1.35
SKA1-201ENST00000285116 PRR4Q16378 134 aa6.6□□□□□ -1.35
SKA1-201ENST00000285116 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
SKA1-201ENST00000285116 K7EIL1 84 aa6.6□□□□□ -1.35
SKA1-201ENST00000285116 IGLV8-61A0A075B6I0 122 aa6.6□□□□□ -1.35
SKA1-201ENST00000285116 MP68P56378 58 aa6.6□□□□□ -1.35
SKA1-201ENST00000285116 LINC00588Q9Y4M8 146 aa6.6□□□□□ -1.35
SKA1-201ENST00000285116 A8MUN3 132 aa6.59□□□□□ -1.36
SKA1-201ENST00000285116 FAM168BA1KXE4 195 aa6.58□□□□□ -1.36
SKA1-201ENST00000285116 RPL37AP8A6NKH3 93 aa6.58□□□□□ -1.36
SKA1-201ENST00000285116 B9D2Q9BPU9 175 aa6.57□□□□□ -1.36
SKA1-201ENST00000285116 REG3GQ6UW15 175 aa6.57□□□□□ -1.36
SKA1-201ENST00000285116 Q5VV11 94 aa6.56□□□□□ -1.36
SKA1-201ENST00000285116 CASC10Q5T4H9 136 aa6.56□□□□□ -1.36
SKA1-201ENST00000285116 SPANXA2-OT1Q8N9U9 137 aa6.56□□□□□ -1.36
SKA1-201ENST00000285116 UBE2BP63146 152 aa6.55□□□□□ -1.36
SKA1-201ENST00000285116 LINC00476Q8WZB0 136 aa6.54□□□□□ -1.36
SKA1-201ENST00000285116 LIMD2Q9BT23 127 aa6.54□□□□□ -1.36
SKA1-201ENST00000285116 H3BPC8 53 aa6.54□□□□□ -1.36
SKA1-201ENST00000285116 UBE2AP49459 152 aa6.54□□□□□ -1.36
SKA1-201ENST00000285116 CNBPP62633 177 aaKnown RBP6.54□□□□□ -1.36
SKA1-201ENST00000285116 WFDC13Q8IUB5 93 aa6.54□□□□□ -1.36
SKA1-201ENST00000285116 LINC00208Q96KT6 92 aa6.54□□□□□ -1.36
SKA1-201ENST00000285116 DNAH10Q8IVF4 4471 aa6.54□□□□□ -1.36
SKA1-201ENST00000285116 DNAH9Q9NYC9 4486 aa6.54□□□□□ -1.36
SKA1-201ENST00000285116 CD164Q04900 197 aa6.53□□□□□ -1.36
SKA1-201ENST00000285116 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
SKA1-201ENST00000285116 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
SKA1-201ENST00000285116 C16orf90A8MZG2 172 aa6.52□□□□□ -1.37
SKA1-201ENST00000285116 Q8N9P0 234 aaPredicted RBP6.52□□□□□ -1.37
SKA1-201ENST00000285116 H0Y9J4 135 aa6.52□□□□□ -1.37
SKA1-201ENST00000285116 IGFL1Q6UW32 110 aa6.51□□□□□ -1.37
SKA1-201ENST00000285116 KRTAP29-1A8MX34 341 aaPredicted RBP6.51□□□□□ -1.37
SKA1-201ENST00000285116 CHKB-CPT1BH3BT56 60 aa6.51□□□□□ -1.37
SKA1-201ENST00000285116 SPRR1BP22528 89 aa6.51□□□□□ -1.37
SKA1-201ENST00000285116 DEFB116Q30KQ4 102 aa6.5□□□□□ -1.37
SKA1-201ENST00000285116 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
SKA1-201ENST00000285116 H0Y9P7 68 aa6.5□□□□□ -1.37
SKA1-201ENST00000285116 STARD9Q9P2P6 4700 aa6.49□□□□□ -1.37
SKA1-201ENST00000285116 A8MU10 97 aa6.49□□□□□ -1.37
SKA1-201ENST00000285116 A0A087WSZ3 146 aa6.49□□□□□ -1.37
SKA1-201ENST00000285116 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
SKA1-201ENST00000285116 PLECQ15149 4684 aaKnown RBP6.48□□□□□ -1.37
SKA1-201ENST00000285116 A0A0G2JQZ4 141 aa6.47□□□□□ -1.37
SKA1-201ENST00000285116 A0A1W2PNN7 141 aa6.47□□□□□ -1.37
SKA1-201ENST00000285116 CASC2Q6XLA1 102 aa6.47□□□□□ -1.37
SKA1-201ENST00000285116 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
SKA1-201ENST00000285116 KTN1-AS1Q86SY8 53 aa6.47□□□□□ -1.37
SKA1-201ENST00000285116 A0A096LNI7 61 aa6.46□□□□□ -1.37
SKA1-201ENST00000285116 Q75L30 129 aa6.46□□□□□ -1.38
SKA1-201ENST00000285116 C9orf163Q8N9P6 203 aa6.46□□□□□ -1.38
SKA1-201ENST00000285116 RPL37AP61513 92 aaKnown RBP6.46□□□□□ -1.38
SKA1-201ENST00000285116 C14orf177Q52M58 125 aa6.46□□□□□ -1.38
SKA1-201ENST00000285116 ATP11AUNQ6ZP68 121 aa6.46□□□□□ -1.38
SKA1-201ENST00000285116 LOC101927531A0A1B0GV80 90 aa6.45□□□□□ -1.38
SKA1-201ENST00000285116 FAM229AH3BQW9 127 aa6.44□□□□□ -1.38
SKA1-201ENST00000285116 SRRM2Q9UQ35 2752 aaKnown RBP6.43□□□□□ -1.38
SKA1-201ENST00000285116 A8MWP4 228 aa6.43□□□□□ -1.38
SKA1-201ENST00000285116 SPTSSBQ8NFR3 76 aa6.43□□□□□ -1.38
SKA1-201ENST00000285116 LCA10Q71F78 164 aa6.42□□□□□ -1.38
SKA1-201ENST00000285116 COA5Q86WW8 74 aa6.42□□□□□ -1.38
SKA1-201ENST00000285116 A6NED7 52 aa6.42□□□□□ -1.38
SKA1-201ENST00000285116 PRLHP81277 87 aa6.42□□□□□ -1.38
SKA1-201ENST00000285116 KRTAP1-5Q9BYS1 174 aa6.42□□□□□ -1.38
SKA1-201ENST00000285116 IGLV7-46A0A075B6I9 117 aa6.41□□□□□ -1.38
SKA1-201ENST00000285116 NDUFS5O43920 106 aa6.41□□□□□ -1.38
SKA1-201ENST00000285116 LINC00472Q9H8W2 130 aa6.41□□□□□ -1.38
SKA1-201ENST00000285116 DYNC2H1Q8NCM8 4307 aaKnown RBP6.4□□□□□ -1.38
SKA1-201ENST00000285116 FRAS1Q86XX4 4008 aa6.4□□□□□ -1.38
SKA1-201ENST00000285116 PHF5AQ7RTV0 110 aaKnown RBP6.39□□□□□ -1.39
SKA1-201ENST00000285116 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
SKA1-201ENST00000285116 A6NN06 94 aa6.38□□□□□ -1.39
SKA1-201ENST00000285116 LCE2DQ5TA82 110 aaPredicted RBP6.38□□□□□ -1.39
SKA1-201ENST00000285116 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
SKA1-201ENST00000285116 RBM12B-AS1Q9P1G2 102 aa6.38□□□□□ -1.39
SKA1-201ENST00000285116 IGKV2-24A0A0C4DH68 120 aa6.37□□□□□ -1.39
SKA1-201ENST00000285116 APLNQ9ULZ1 77 aa6.37□□□□□ -1.39
SKA1-201ENST00000285116 KRTAP11-1Q8IUC1 163 aa6.36□□□□□ -1.39
SKA1-201ENST00000285116 MMP24-AS1A0A0U1RRL7 71 aa6.36□□□□□ -1.39
SKA1-201ENST00000285116 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
SKA1-201ENST00000285116 HYDINQ4G0P3 5121 aa6.35□□□□□ -1.39
SKA1-201ENST00000285116 ASB16-AS1Q495Z4 193 aa6.35□□□□□ -1.39
SKA1-201ENST00000285116 PLAC8Q9NZF1 115 aa6.34□□□□□ -1.39
SKA1-201ENST00000285116 TP53AIP1Q9HCN2 124 aa6.34□□□□□ -1.39
SKA1-201ENST00000285116 KMT2CQ8NEZ4 4911 aaKnown RBP6.33□□□□□ -1.4
SKA1-201ENST00000285116 LINC00483Q53H64 154 aa6.32□□□□□ -1.4
SKA1-201ENST00000285116 PCOTHQ58A44 107 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms