RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.11
SREK1-201ENST00000284041 ALPK2Q86TB3 2170 aa1.9□□□□□ -2.11
SREK1-201ENST00000284041 DEFB131AP59861 70 aa1.89□□□□□ -2.11
SREK1-201ENST00000284041 SPINT4Q6UDR6 99 aa1.89□□□□□ -2.11
SREK1-201ENST00000284041 UNC13CQ8NB66 2214 aa1.89□□□□□ -2.11
SREK1-201ENST00000284041 ASXL3Q9C0F0 2248 aa1.89□□□□□ -2.11
SREK1-201ENST00000284041 NBEAL1Q6ZS30 2694 aa1.89□□□□□ -2.11
SREK1-201ENST00000284041 DEFB123Q8N688 67 aa1.89□□□□□ -2.11
SREK1-201ENST00000284041 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
SREK1-201ENST00000284041 F8P00451 2351 aa1.89□□□□□ -2.11
SREK1-201ENST00000284041 SPRR1AP35321 89 aa1.88□□□□□ -2.11
SREK1-201ENST00000284041 CLPSL2Q6UWE3 100 aa1.88□□□□□ -2.11
SREK1-201ENST00000284041 DMBT1Q9UGM3 2413 aaPredicted RBP1.88□□□□□ -2.11
SREK1-201ENST00000284041 UTP20O75691 2785 aaKnown RBP1.88□□□□□ -2.11
SREK1-201ENST00000284041 DYNC2H1Q8NCM8 4307 aaKnown RBP1.88□□□□□ -2.11
SREK1-201ENST00000284041 COL6A5A8TX70 2615 aa1.88□□□□□ -2.11
SREK1-201ENST00000284041 GCN1Q92616 2671 aaKnown RBP1.87□□□□□ -2.11
SREK1-201ENST00000284041 IGSF10Q6WRI0 2623 aa1.87□□□□□ -2.11
SREK1-201ENST00000284041 LYNX1P0DP58 116 aa1.86□□□□□ -2.11
SREK1-201ENST00000284041 ASH1LQ9NR48 2969 aaKnown RBP1.86□□□□□ -2.11
SREK1-201ENST00000284041 PKHD1P08F94 4074 aa1.86□□□□□ -2.11
SREK1-201ENST00000284041 BSNQ9UPA5 3926 aa1.86□□□□□ -2.11
SREK1-201ENST00000284041 IGFL1Q6UW32 110 aa1.86□□□□□ -2.11
SREK1-201ENST00000284041 TRRAPQ9Y4A5 3859 aa1.86□□□□□ -2.11
SREK1-201ENST00000284041 ZNF292O60281 2723 aa1.86□□□□□ -2.11
SREK1-201ENST00000284041 PKHD1L1Q86WI1 4243 aa1.86□□□□□ -2.11
SREK1-201ENST00000284041 IGF2RP11717 2491 aa1.85□□□□□ -2.11
SREK1-201ENST00000284041 SDK1Q7Z5N4 2213 aa1.85□□□□□ -2.11
SREK1-201ENST00000284041 KRTAP10-1P60331 282 aa1.85□□□□□ -2.11
SREK1-201ENST00000284041 PRRC2BQ5JSZ5 2229 aaKnown RBP1.85□□□□□ -2.11
SREK1-201ENST00000284041 DEFB119Q8N690 84 aa1.85□□□□□ -2.11
SREK1-201ENST00000284041 LEAP2Q969E1 77 aa1.85□□□□□ -2.11
SREK1-201ENST00000284041 CADP27708 2225 aa1.84□□□□□ -2.11
SREK1-201ENST00000284041 UNQ6190/PRO20217Q6UXQ8 127 aa1.84□□□□□ -2.11
SREK1-201ENST00000284041 SPTY2D1-AS1A0A0U1RR47 76 aa1.84□□□□□ -2.12
SREK1-201ENST00000284041 SPRR1BP22528 89 aa1.84□□□□□ -2.12
SREK1-201ENST00000284041 PLCE1Q9P212 2302 aa1.84□□□□□ -2.12
SREK1-201ENST00000284041 DMDP11532 3685 aa1.83□□□□□ -2.12
SREK1-201ENST00000284041 TENM2Q9NT68 2774 aa1.83□□□□□ -2.12
SREK1-201ENST00000284041 ANK3Q12955 4377 aaKnown RBP1.83□□□□□ -2.12
SREK1-201ENST00000284041 MRPL34Q9BQ48 92 aaKnown RBP1.83□□□□□ -2.12
SREK1-201ENST00000284041 C6orf48Q9UBA6 75 aa1.83□□□□□ -2.12
SREK1-201ENST00000284041 DNAH6Q9C0G6 4158 aa1.83□□□□□ -2.12
SREK1-201ENST00000284041 KRTAP10-7P60409 375 aaPredicted RBP1.83□□□□□ -2.12
SREK1-201ENST00000284041 COL6A6A6NMZ7 2263 aa1.83□□□□□ -2.12
SREK1-201ENST00000284041 ANK2Q01484 3957 aa1.83□□□□□ -2.12
SREK1-201ENST00000284041 PTPRQQ9UMZ3 2332 aa1.82□□□□□ -2.12
SREK1-201ENST00000284041 FRAS1Q86XX4 4008 aa1.82□□□□□ -2.12
SREK1-201ENST00000284041 PRB2P02812 416 aaPredicted RBP1.82□□□□□ -2.12
SREK1-201ENST00000284041 FLGP20930 4061 aaPredicted RBP1.82□□□□□ -2.12
SREK1-201ENST00000284041 H1FX-AS1Q4G0G2 97 aa1.82□□□□□ -2.12
SREK1-201ENST00000284041 KNTC1P50748 2209 aa1.82□□□□□ -2.12
SREK1-201ENST00000284041 PP632Q6XCG6 107 aa1.81□□□□□ -2.12
SREK1-201ENST00000284041 RPL37P61927 97 aaKnown RBP1.81□□□□□ -2.12
SREK1-201ENST00000284041 DNAH11Q96DT5 4516 aa1.81□□□□□ -2.12
SREK1-201ENST00000284041 H0YGG7 62 aa1.81□□□□□ -2.12
SREK1-201ENST00000284041 ZNF469Q96JG9 3925 aaPredicted RBP1.8□□□□□ -2.12
SREK1-201ENST00000284041 KRTAP10-10P60014 251 aa1.8□□□□□ -2.12
SREK1-201ENST00000284041 DEFB134Q4QY38 66 aa1.8□□□□□ -2.12
SREK1-201ENST00000284041 OTOGQ6ZRI0 2925 aa1.79□□□□□ -2.12
SREK1-201ENST00000284041 ABCA4P78363 2273 aa1.79□□□□□ -2.12
SREK1-201ENST00000284041 TECTAO75443 2155 aa1.79□□□□□ -2.12
SREK1-201ENST00000284041 HECTD4Q9Y4D8 3996 aa1.79□□□□□ -2.12
SREK1-201ENST00000284041 RTTNQ86VV8 2226 aa1.78□□□□□ -2.12
SREK1-201ENST00000284041 KRTAP9-6A8MVA2 160 aa1.78□□□□□ -2.12
SREK1-201ENST00000284041 F5P12259 2224 aa1.78□□□□□ -2.12
SREK1-201ENST00000284041 DNAH10Q8IVF4 4471 aa1.78□□□□□ -2.12
SREK1-201ENST00000284041 DEFB109BQ30KR1 87 aa1.78□□□□□ -2.12
SREK1-201ENST00000284041 FAT2Q9NYQ8 4349 aa1.78□□□□□ -2.12
SREK1-201ENST00000284041 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.13
SREK1-201ENST00000284041 CSPG4Q6UVK1 2322 aa1.78□□□□□ -2.13
SREK1-201ENST00000284041 CNTRLQ7Z7A1 2325 aa1.77□□□□□ -2.13
SREK1-201ENST00000284041 DEFB108AA8MXU0 73 aa1.77□□□□□ -2.13
SREK1-201ENST00000284041 MINOS1Q5TGZ0 78 aa1.77□□□□□ -2.13
SREK1-201ENST00000284041 USF3Q68DE3 2245 aa1.77□□□□□ -2.13
SREK1-201ENST00000284041 KMT2AQ03164 3969 aa1.77□□□□□ -2.13
SREK1-201ENST00000284041 CHD6Q8TD26 2715 aa1.76□□□□□ -2.13
SREK1-201ENST00000284041 DNAH5Q8TE73 4624 aa1.76□□□□□ -2.13
SREK1-201ENST00000284041 AHCTF1Q8WYP5 2266 aa1.75□□□□□ -2.13
SREK1-201ENST00000284041 PRB1P04280 392 aa1.75□□□□□ -2.13
SREK1-201ENST00000284041 CFAP54Q96N23 3096 aa1.75□□□□□ -2.13
SREK1-201ENST00000284041 DNAH2Q9P225 4427 aa1.75□□□□□ -2.13
SREK1-201ENST00000284041 CELSR2Q9HCU4 2923 aa1.74□□□□□ -2.13
SREK1-201ENST00000284041 CHD7Q9P2D1 2997 aa1.74□□□□□ -2.13
SREK1-201ENST00000284041 SSBP3-AS1Q7Z2R9 100 aa1.74□□□□□ -2.13
SREK1-201ENST00000284041 REV3LO60673 3130 aa1.74□□□□□ -2.13
SREK1-201ENST00000284041 WFDC13Q8IUB5 93 aa1.74□□□□□ -2.13
SREK1-201ENST00000284041 DNAJC13O75165 2243 aa1.73□□□□□ -2.13
SREK1-201ENST00000284041 DNAH8Q96JB1 4490 aa1.73□□□□□ -2.13
SREK1-201ENST00000284041 PKD1P98161 4303 aa1.73□□□□□ -2.13
SREK1-201ENST00000284041 PCOTHQ58A44 107 aa1.73□□□□□ -2.13
SREK1-201ENST00000284041 ACACAQ13085 2346 aa1.73□□□□□ -2.13
SREK1-201ENST00000284041 FLG2Q5D862 2391 aaPredicted RBP1.73□□□□□ -2.13
SREK1-201ENST00000284041 H3BUA1 57 aa1.73□□□□□ -2.13
SREK1-201ENST00000284041 KRTAP21-3Q3LHN1 58 aa1.73□□□□□ -2.13
SREK1-201ENST00000284041 NSD1Q96L73 2696 aaPredicted RBP1.73□□□□□ -2.13
SREK1-201ENST00000284041 COL6A3P12111 3177 aa1.72□□□□□ -2.13
SREK1-201ENST00000284041 HSPG2P98160 4391 aa1.72□□□□□ -2.13
SREK1-201ENST00000284041 FBN3Q75N90 2809 aa1.72□□□□□ -2.13
SREK1-201ENST00000284041 SPINK13Q1W4C9 94 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms