RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 FAM30AQ9NZY2 134 aa12.93□□□□□ -0.34
YBX3-202ENST00000279550 RYR3Q15413 4870 aa12.93□□□□□ -0.34
YBX3-202ENST00000279550 FAM236AA0A1B0GUQ0 79 aa12.93□□□□□ -0.34
YBX3-202ENST00000279550 FAM236BA0A1B0GV22 79 aa12.93□□□□□ -0.34
YBX3-202ENST00000279550 Q6ZSA8 131 aa12.93□□□□□ -0.34
YBX3-202ENST00000279550 ANAPC13Q9BS18 74 aa12.93□□□□□ -0.34
YBX3-202ENST00000279550 BCE1O60756 84 aa12.92□□□□□ -0.34
YBX3-202ENST00000279550 UBE2AP49459 152 aa12.91□□□□□ -0.34
YBX3-202ENST00000279550 PKHD1P08F94 4074 aa12.91□□□□□ -0.34
YBX3-202ENST00000279550 ATP5EP2Q5VTU8 51 aa12.91□□□□□ -0.34
YBX3-202ENST00000279550 KRTAP13-1Q8IUC0 172 aa12.91□□□□□ -0.34
YBX3-202ENST00000279550 A0A087WVE0 104 aa12.89□□□□□ -0.35
YBX3-202ENST00000279550 A0A1W2PNM2 257 aa12.89□□□□□ -0.35
YBX3-202ENST00000279550 C1orf137Q5JT78 98 aa12.89□□□□□ -0.35
YBX3-202ENST00000279550 CIRBP-AS1Q8TBR5 109 aa12.86□□□□□ -0.35
YBX3-202ENST00000279550 HAMPP81172 84 aa12.85□□□□□ -0.35
YBX3-202ENST00000279550 HIST1H4AP62805 103 aaKnown RBP12.85□□□□□ -0.35
YBX3-202ENST00000279550 SCXQ7RTU7 201 aa12.85□□□□□ -0.35
YBX3-202ENST00000279550 A0A0G2JQZ4 141 aa12.84□□□□□ -0.35
YBX3-202ENST00000279550 DNAH8Q96JB1 4490 aa12.83□□□□□ -0.36
YBX3-202ENST00000279550 F8WEM9 126 aa12.82□□□□□ -0.36
YBX3-202ENST00000279550 SPRR1BP22528 89 aa12.82□□□□□ -0.36
YBX3-202ENST00000279550 Q8NBF4 154 aa12.82□□□□□ -0.36
YBX3-202ENST00000279550 PSORS1C2Q9UIG4 136 aa12.81□□□□□ -0.36
YBX3-202ENST00000279550 SRRM2Q9UQ35 2752 aaKnown RBP12.81□□□□□ -0.36
YBX3-202ENST00000279550 IGLV8-61A0A075B6I0 122 aa12.79□□□□□ -0.36
YBX3-202ENST00000279550 IGFL1Q6UW32 110 aa12.79□□□□□ -0.36
YBX3-202ENST00000279550 LRP1BQ9NZR2 4599 aa12.78□□□□□ -0.36
YBX3-202ENST00000279550 CXCL6P80162 114 aa12.77□□□□□ -0.36
YBX3-202ENST00000279550 SPRR4Q96PI1 79 aa12.77□□□□□ -0.36
YBX3-202ENST00000279550 NREPQ16612 68 aa12.76□□□□□ -0.37
YBX3-202ENST00000279550 CCDC179H3BU77 68 aa12.74□□□□□ -0.37
YBX3-202ENST00000279550 A0A1B0GW54 56 aa12.73□□□□□ -0.37
YBX3-202ENST00000279550 DYNC1H1Q14204 4646 aaKnown RBP12.72□□□□□ -0.37
YBX3-202ENST00000279550 CRYGAP11844 174 aa12.71□□□□□ -0.37
YBX3-202ENST00000279550 ATOX1O00244 68 aa12.69□□□□□ -0.38
YBX3-202ENST00000279550 Q8N9L7 120 aa12.68□□□□□ -0.38
YBX3-202ENST00000279550 ZNF861PO60384 105 aa12.66□□□□□ -0.38
YBX3-202ENST00000279550 BPY2O14599 106 aa12.65□□□□□ -0.38
YBX3-202ENST00000279550 LINC00483Q53H64 154 aa12.65□□□□□ -0.38
YBX3-202ENST00000279550 IGKV4-1P06312 121 aa12.64□□□□□ -0.39
YBX3-202ENST00000279550 IGLV7-43P04211 117 aa12.62□□□□□ -0.39
YBX3-202ENST00000279550 A0A087WSZ3 146 aa12.61□□□□□ -0.39
YBX3-202ENST00000279550 ZNF706Q9Y5V0 76 aaPredicted RBP12.6□□□□□ -0.39
YBX3-202ENST00000279550 IGLV9-49A0A0B4J1Y8 123 aa12.59□□□□□ -0.39
YBX3-202ENST00000279550 ANAPC11Q9NYG5 84 aa12.59□□□□□ -0.39
YBX3-202ENST00000279550 APOBP04114 4563 aaKnown RBP12.59□□□□□ -0.39
YBX3-202ENST00000279550 COX7CP15954 63 aa12.58□□□□□ -0.4
YBX3-202ENST00000279550 DSCR10P59022 87 aa12.56□□□□□ -0.4
YBX3-202ENST00000279550 C9orf153Q5TBE3 101 aa12.56□□□□□ -0.4
YBX3-202ENST00000279550 SERP2Q8N6R1 65 aa12.56□□□□□ -0.4
YBX3-202ENST00000279550 UQCRQO14949 82 aa12.55□□□□□ -0.4
YBX3-202ENST00000279550 SMR3BP02814 79 aaPredicted RBP12.54□□□□□ -0.4
YBX3-202ENST00000279550 VPS13BQ7Z7G8 4022 aa12.52□□□□□ -0.4
YBX3-202ENST00000279550 DEFB116Q30KQ4 102 aa12.52□□□□□ -0.41
YBX3-202ENST00000279550 CDK2AP2O75956 126 aa12.51□□□□□ -0.41
YBX3-202ENST00000279550 RPL37AP61513 92 aaKnown RBP12.5□□□□□ -0.41
YBX3-202ENST00000279550 MOBPQ13875 183 aa12.5□□□□□ -0.41
YBX3-202ENST00000279550 K7EQZ3 153 aa12.48□□□□□ -0.41
YBX3-202ENST00000279550 EPPK1P58107 5090 aaKnown RBP12.46□□□□□ -0.42
YBX3-202ENST00000279550 TRAV7A0A075B6U4 112 aa12.44□□□□□ -0.42
YBX3-202ENST00000279550 HRCT1Q6UXD1 115 aa12.44□□□□□ -0.42
YBX3-202ENST00000279550 LINC00472Q9H8W2 130 aa12.43□□□□□ -0.42
YBX3-202ENST00000279550 CYSTM1Q9H1C7 97 aa12.42□□□□□ -0.42
YBX3-202ENST00000279550 KRTAP10-4P60372 401 aaPredicted RBP12.4□□□□□ -0.42
YBX3-202ENST00000279550 FAT1Q14517 4588 aa12.4□□□□□ -0.42
YBX3-202ENST00000279550 HSPG2P98160 4391 aa12.39□□□□□ -0.43
YBX3-202ENST00000279550 SMIM20Q8N5G0 67 aa12.39□□□□□ -0.43
YBX3-202ENST00000279550 FAM229AH3BQW9 127 aa12.36□□□□□ -0.43
YBX3-202ENST00000279550 Q96NJ1 140 aa12.36□□□□□ -0.43
YBX3-202ENST00000279550 SPINK6Q6UWN8 80 aa12.34□□□□□ -0.43
YBX3-202ENST00000279550 SS18L2Q9UHA2 77 aa12.34□□□□□ -0.43
YBX3-202ENST00000279550 PLA2G1BP04054 148 aaKnown RBP12.34□□□□□ -0.43
YBX3-202ENST00000279550 OCR1Q9BZK8 76 aa12.34□□□□□ -0.43
YBX3-202ENST00000279550 C20orf197Q8N268 126 aa12.32□□□□□ -0.44
YBX3-202ENST00000279550 HCG22E2RYF7 251 aa12.31□□□□□ -0.44
YBX3-202ENST00000279550 RYR1P21817 5038 aa12.31□□□□□ -0.44
YBX3-202ENST00000279550 A8MWP4 228 aa12.31□□□□□ -0.44
YBX3-202ENST00000279550 Q5VSD8 79 aa12.31□□□□□ -0.44
YBX3-202ENST00000279550 A0A087X002 238 aa12.3□□□□□ -0.44
YBX3-202ENST00000279550 PRR15Q8IV56 129 aa12.3□□□□□ -0.44
YBX3-202ENST00000279550 KRTAP13-2Q52LG2 175 aa12.29□□□□□ -0.44
YBX3-202ENST00000279550 KIAA1109Q2LD37 5005 aa12.28□□□□□ -0.44
YBX3-202ENST00000279550 WFDC13Q8IUB5 93 aa12.28□□□□□ -0.44
YBX3-202ENST00000279550 KRTAP1-4P0C5Y4 121 aa12.27□□□□□ -0.45
YBX3-202ENST00000279550 J3KT08 172 aa12.26□□□□□ -0.45
YBX3-202ENST00000279550 SSBP3-AS1Q7Z2R9 100 aa12.26□□□□□ -0.45
YBX3-202ENST00000279550 KRTAP17-1Q9BYP8 105 aa12.25□□□□□ -0.45
YBX3-202ENST00000279550 KRTAP29-1A8MX34 341 aaPredicted RBP12.24□□□□□ -0.45
YBX3-202ENST00000279550 FAM229BQ4G0N7 80 aa12.23□□□□□ -0.45
YBX3-202ENST00000279550 Q8N1X5 172 aa12.23□□□□□ -0.45
YBX3-202ENST00000279550 SNURFQ9Y675 71 aa12.23□□□□□ -0.45
YBX3-202ENST00000279550 CD164Q04900 197 aa12.21□□□□□ -0.45
YBX3-202ENST00000279550 KLKP1Q107X0 134 aa12.19□□□□□ -0.46
YBX3-202ENST00000279550 MMP24-AS1A0A0U1RRL7 71 aa12.18□□□□□ -0.46
YBX3-202ENST00000279550 CASC2Q6XLA1 102 aa12.18□□□□□ -0.46
YBX3-202ENST00000279550 TMEM254Q8TBM7 123 aa12.17□□□□□ -0.46
YBX3-202ENST00000279550 NDUFB1O75438 58 aa12.16□□□□□ -0.46
YBX3-202ENST00000279550 A0A0U1RQV1 116 aa12.14□□□□□ -0.47
YBX3-202ENST00000279550 H7BZZ5 65 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms