RNA–Protein interactions for RNA: ENST00000278426.7

SLC43A1-201, Transcript of solute carrier family 43 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC43A1, Length 2,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-201ENST00000278426 Q1T7F1 81 aa11.36□□□□□ -0.59
SLC43A1-201ENST00000278426 COL6A5A8TX70 2615 aa11.34□□□□□ -0.59
SLC43A1-201ENST00000278426 RPL37AP61513 92 aaKnown RBP11.34□□□□□ -0.59
SLC43A1-201ENST00000278426 NBEAL1Q6ZS30 2694 aa11.34□□□□□ -0.59
SLC43A1-201ENST00000278426 IGKV2-24A0A0C4DH68 120 aa11.33□□□□□ -0.6
SLC43A1-201ENST00000278426 A0A087WSZ3 146 aa11.32□□□□□ -0.6
SLC43A1-201ENST00000278426 PRLHP81277 87 aa11.32□□□□□ -0.6
SLC43A1-201ENST00000278426 CYP4F30PQ9H0H9 118 aa11.32□□□□□ -0.6
SLC43A1-201ENST00000278426 TRAV22A0A0B4J277 110 aa11.31□□□□□ -0.6
SLC43A1-201ENST00000278426 DNAH3Q8TD57 4116 aa11.3□□□□□ -0.6
SLC43A1-201ENST00000278426 A0A096LNI7 61 aa11.29□□□□□ -0.6
SLC43A1-201ENST00000278426 DNAH10Q8IVF4 4471 aa11.28□□□□□ -0.6
SLC43A1-201ENST00000278426 LINC00208Q96KT6 92 aa11.28□□□□□ -0.6
SLC43A1-201ENST00000278426 SRRM2Q9UQ35 2752 aaKnown RBP11.27□□□□□ -0.6
SLC43A1-201ENST00000278426 V9GYY9 64 aa11.26□□□□□ -0.61
SLC43A1-201ENST00000278426 LYSTQ99698 3801 aa11.26□□□□□ -0.61
SLC43A1-201ENST00000278426 PRR15Q8IV56 129 aa11.25□□□□□ -0.61
SLC43A1-201ENST00000278426 MP68P56378 58 aa11.25□□□□□ -0.61
SLC43A1-201ENST00000278426 KRTAP1-5Q9BYS1 174 aa11.25□□□□□ -0.61
SLC43A1-201ENST00000278426 HUWE1Q7Z6Z7 4374 aaKnown RBP11.25□□□□□ -0.61
SLC43A1-201ENST00000278426 A8MUN3 132 aa11.24□□□□□ -0.61
SLC43A1-201ENST00000278426 KRTAP29-1A8MX34 341 aaPredicted RBP11.23□□□□□ -0.61
SLC43A1-201ENST00000278426 NDUFB1O75438 58 aa11.23□□□□□ -0.61
SLC43A1-201ENST00000278426 C16orf90A8MZG2 172 aa11.21□□□□□ -0.61
SLC43A1-201ENST00000278426 B9D2Q9BPU9 175 aa11.21□□□□□ -0.61
SLC43A1-201ENST00000278426 CSMD3Q7Z407 3707 aa11.21□□□□□ -0.62
SLC43A1-201ENST00000278426 IGLV8-61A0A075B6I0 122 aa11.2□□□□□ -0.62
SLC43A1-201ENST00000278426 A8MU10 97 aa11.2□□□□□ -0.62
SLC43A1-201ENST00000278426 H0Y9P7 68 aa11.2□□□□□ -0.62
SLC43A1-201ENST00000278426 K7EIL1 84 aa11.2□□□□□ -0.62
SLC43A1-201ENST00000278426 KRTAP11-1Q8IUC1 163 aa11.2□□□□□ -0.62
SLC43A1-201ENST00000278426 CHTF8P0CG12 524 aa11.19□□□□□ -0.62
SLC43A1-201ENST00000278426 UBE2AP49459 152 aa11.19□□□□□ -0.62
SLC43A1-201ENST00000278426 CASC2Q6XLA1 102 aa11.19□□□□□ -0.62
SLC43A1-201ENST00000278426 CNBPP62633 177 aaKnown RBP11.18□□□□□ -0.62
SLC43A1-201ENST00000278426 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
SLC43A1-201ENST00000278426 STAB2Q8WWQ8 2551 aa11.16□□□□□ -0.62
SLC43A1-201ENST00000278426 DNAH9Q9NYC9 4486 aa11.15□□□□□ -0.62
SLC43A1-201ENST00000278426 Q5VV11 94 aa11.14□□□□□ -0.63
SLC43A1-201ENST00000278426 MGAM2Q2M2H8 2515 aa11.14□□□□□ -0.63
SLC43A1-201ENST00000278426 TENM2Q9NT68 2774 aa11.13□□□□□ -0.63
SLC43A1-201ENST00000278426 COL7A1Q02388 2944 aa11.12□□□□□ -0.63
SLC43A1-201ENST00000278426 SEC61GP60059 68 aa11.12□□□□□ -0.63
SLC43A1-201ENST00000278426 PMAIP1Q13794 54 aa11.11□□□□□ -0.63
SLC43A1-201ENST00000278426 LINC00472Q9H8W2 130 aa11.11□□□□□ -0.63
SLC43A1-201ENST00000278426 A8MWP4 228 aa11.1□□□□□ -0.63
SLC43A1-201ENST00000278426 Q8N9P0 234 aaPredicted RBP11.1□□□□□ -0.63
SLC43A1-201ENST00000278426 UBE2DNLQ8IWF7 75 aa11.09□□□□□ -0.63
SLC43A1-201ENST00000278426 SPANXA2-OT1Q8N9U9 137 aa11.09□□□□□ -0.63
SLC43A1-201ENST00000278426 C9orf163Q8N9P6 203 aa11.07□□□□□ -0.64
SLC43A1-201ENST00000278426 H0Y9J4 135 aa11.05□□□□□ -0.64
SLC43A1-201ENST00000278426 H3BPC8 53 aa11.05□□□□□ -0.64
SLC43A1-201ENST00000278426 CHKB-CPT1BH3BT56 60 aa11.05□□□□□ -0.64
SLC43A1-201ENST00000278426 PRR15LQ9BU68 103 aa11.05□□□□□ -0.64
SLC43A1-201ENST00000278426 MMP24-AS1A0A0U1RRL7 71 aa11.03□□□□□ -0.64
SLC43A1-201ENST00000278426 SPRR1BP22528 89 aa11.03□□□□□ -0.64
SLC43A1-201ENST00000278426 DNAH7Q8WXX0 4024 aa11□□□□□ -0.65
SLC43A1-201ENST00000278426 PANO1I0J062 215 aa11□□□□□ -0.65
SLC43A1-201ENST00000278426 APLNQ9ULZ1 77 aa11□□□□□ -0.65
SLC43A1-201ENST00000278426 C14orf177Q52M58 125 aa10.99□□□□□ -0.65
SLC43A1-201ENST00000278426 COA5Q86WW8 74 aa10.99□□□□□ -0.65
SLC43A1-201ENST00000278426 LIMD2Q9BT23 127 aa10.99□□□□□ -0.65
SLC43A1-201ENST00000278426 PCOTHQ58A44 107 aa10.99□□□□□ -0.65
SLC43A1-201ENST00000278426 IGLV7-46A0A075B6I9 117 aa10.94□□□□□ -0.66
SLC43A1-201ENST00000278426 CD164Q04900 197 aa10.93□□□□□ -0.66
SLC43A1-201ENST00000278426 LCA10Q71F78 164 aa10.92□□□□□ -0.66
SLC43A1-201ENST00000278426 IGLV9-49A0A0B4J1Y8 123 aa10.92□□□□□ -0.66
SLC43A1-201ENST00000278426 SPTSSBQ8NFR3 76 aa10.91□□□□□ -0.66
SLC43A1-201ENST00000278426 Q96NJ1 140 aa10.91□□□□□ -0.66
SLC43A1-201ENST00000278426 KRTAP13-1Q8IUC0 172 aa10.89□□□□□ -0.67
SLC43A1-201ENST00000278426 Q75L30 129 aa10.89□□□□□ -0.67
SLC43A1-201ENST00000278426 A6NED7 52 aa10.88□□□□□ -0.67
SLC43A1-201ENST00000278426 NBDYA0A0U1RRE5 68 aa10.87□□□□□ -0.67
SLC43A1-201ENST00000278426 LOC101927531A0A1B0GV80 90 aa10.87□□□□□ -0.67
SLC43A1-201ENST00000278426 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.87□□□□□ -0.67
SLC43A1-201ENST00000278426 PLECQ15149 4684 aaKnown RBP10.86□□□□□ -0.67
SLC43A1-201ENST00000278426 ASB16-AS1Q495Z4 193 aa10.85□□□□□ -0.67
SLC43A1-201ENST00000278426 SPAG11AQ6PDA7 123 aa10.85□□□□□ -0.67
SLC43A1-201ENST00000278426 C8orf17Q9NRJ1 99 aa10.85□□□□□ -0.67
SLC43A1-201ENST00000278426 Q6ZRN7 208 aaPredicted RBP10.84□□□□□ -0.67
SLC43A1-201ENST00000278426 NDUFS5O43920 106 aa10.83□□□□□ -0.68
SLC43A1-201ENST00000278426 MDFIQ99750 246 aa10.83□□□□□ -0.68
SLC43A1-201ENST00000278426 IGHV6-1A0A0B4J1U7 121 aa10.82□□□□□ -0.68
SLC43A1-201ENST00000278426 MOBPQ13875 183 aa10.82□□□□□ -0.68
SLC43A1-201ENST00000278426 TP53AIP1Q9HCN2 124 aa10.81□□□□□ -0.68
SLC43A1-201ENST00000278426 Q6ZR54 194 aa10.8□□□□□ -0.68
SLC43A1-201ENST00000278426 DYNC2H1Q8NCM8 4307 aaKnown RBP10.8□□□□□ -0.68
SLC43A1-201ENST00000278426 SPACA4Q8TDM5 124 aa10.79□□□□□ -0.68
SLC43A1-201ENST00000278426 ANAPC11Q9NYG5 84 aa10.78□□□□□ -0.68
SLC43A1-201ENST00000278426 ATP11AUNQ6ZP68 121 aa10.78□□□□□ -0.68
SLC43A1-201ENST00000278426 A0A087X002 238 aa10.77□□□□□ -0.68
SLC43A1-201ENST00000278426 HRES1P13985 223 aa10.77□□□□□ -0.68
SLC43A1-201ENST00000278426 NOTCH2NLQ7Z3S9 236 aa10.77□□□□□ -0.68
SLC43A1-201ENST00000278426 LINC01558Q9Y6Z2 57 aa10.77□□□□□ -0.69
SLC43A1-201ENST00000278426 KTN1-AS1Q86SY8 53 aa10.76□□□□□ -0.69
SLC43A1-201ENST00000278426 A0A1B0GVX0 72 aa10.76□□□□□ -0.69
SLC43A1-201ENST00000278426 PLAC8Q9NZF1 115 aa10.75□□□□□ -0.69
SLC43A1-201ENST00000278426 CDC42SE1Q9NRR8 79 aa10.74□□□□□ -0.69
SLC43A1-201ENST00000278426 A6NN06 94 aa10.73□□□□□ -0.69
SLC43A1-201ENST00000278426 LINC00483Q53H64 154 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms