RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 DNAH10Q8IVF4 4471 aa3.76□□□□□ -1.81
CDKAL1-201ENST00000274695 NIPBLQ6KC79 2804 aaeCLIP3.76□□□□□ -1.812e-6■■■■□ 19.3
CDKAL1-201ENST00000274695 K7EQZ3 153 aa3.75□□□□□ -1.81
CDKAL1-201ENST00000274695 RPL37AP61513 92 aaKnown RBP3.75□□□□□ -1.81
CDKAL1-201ENST00000274695 KRTAP13-1Q8IUC0 172 aa3.75□□□□□ -1.81
CDKAL1-201ENST00000274695 LINC00472Q9H8W2 130 aa3.75□□□□□ -1.81
CDKAL1-201ENST00000274695 Q6ZR54 194 aa3.74□□□□□ -1.81
CDKAL1-201ENST00000274695 SCXQ7RTU7 201 aa3.74□□□□□ -1.81
CDKAL1-201ENST00000274695 Q8N9L7 120 aa3.74□□□□□ -1.81
CDKAL1-201ENST00000274695 FAM168BA1KXE4 195 aa3.74□□□□□ -1.81
CDKAL1-201ENST00000274695 Q5VV11 94 aa3.73□□□□□ -1.81
CDKAL1-201ENST00000274695 IGFL1Q6UW32 110 aa3.73□□□□□ -1.81
CDKAL1-201ENST00000274695 HECTD4Q9Y4D8 3996 aa3.73□□□□□ -1.81
CDKAL1-201ENST00000274695 CSPG4Q6UVK1 2322 aa3.72□□□□□ -1.81
CDKAL1-201ENST00000274695 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
CDKAL1-201ENST00000274695 USP9YO00507 2555 aaPredicted RBP3.72□□□□□ -1.81
CDKAL1-201ENST00000274695 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
CDKAL1-201ENST00000274695 WNK1Q9H4A3 2382 aa3.72□□□□□ -1.81
CDKAL1-201ENST00000274695 IGKV2D-30A0A075B6S6 120 aa3.71□□□□□ -1.81
CDKAL1-201ENST00000274695 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.81
CDKAL1-201ENST00000274695 Q8N9P0 234 aaPredicted RBP3.71□□□□□ -1.81
CDKAL1-201ENST00000274695 Q96NJ1 140 aa3.71□□□□□ -1.81
CDKAL1-201ENST00000274695 LIMD2Q9BT23 127 aa3.71□□□□□ -1.81
CDKAL1-201ENST00000274695 RIF1Q5UIP0 2472 aaKnown RBP3.71□□□□□ -1.82
CDKAL1-201ENST00000274695 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
CDKAL1-201ENST00000274695 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
CDKAL1-201ENST00000274695 A8MWP4 228 aa3.71□□□□□ -1.82
CDKAL1-201ENST00000274695 LINC00483Q53H64 154 aa3.71□□□□□ -1.82
CDKAL1-201ENST00000274695 ST20-AS1Q8NBB2 130 aa3.71□□□□□ -1.82
CDKAL1-201ENST00000274695 NCOR2Q9Y618 2525 aa3.71□□□□□ -1.82
CDKAL1-201ENST00000274695 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
CDKAL1-201ENST00000274695 C16orf90A8MZG2 172 aa3.7□□□□□ -1.82
CDKAL1-201ENST00000274695 C3orf84H3BNL1 204 aa3.7□□□□□ -1.82
CDKAL1-201ENST00000274695 C14orf177Q52M58 125 aa3.7□□□□□ -1.82
CDKAL1-201ENST00000274695 NOTCH3Q9UM47 2321 aa3.7□□□□□ -1.82
CDKAL1-201ENST00000274695 HIVEP1P15822 2718 aa3.7□□□□□ -1.82
CDKAL1-201ENST00000274695 KRTAP13-3Q3SY46 172 aa3.7□□□□□ -1.82
CDKAL1-201ENST00000274695 NF1P21359 2839 aa3.69□□□□□ -1.82
CDKAL1-201ENST00000274695 TENM4Q6N022 2769 aa3.69□□□□□ -1.82
CDKAL1-201ENST00000274695 MMP24-AS1A0A0U1RRL7 71 aa3.69□□□□□ -1.82
CDKAL1-201ENST00000274695 PHF5AQ7RTV0 110 aaKnown RBP3.69□□□□□ -1.82
CDKAL1-201ENST00000274695 CSMD3Q7Z407 3707 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 USP24Q9UPU5 2620 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 A6NED7 52 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 KRTAP10-11P60412 298 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 CHD8Q9HCK8 2581 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 PRB1P04280 392 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 KRTAP17-1Q9BYP8 105 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 LINC01558Q9Y6Z2 57 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 UBE2BP63146 152 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 TP53AIP1Q9HCN2 124 aa3.68□□□□□ -1.82
CDKAL1-201ENST00000274695 TENM2Q9NT68 2774 aa3.67□□□□□ -1.82
CDKAL1-201ENST00000274695 NBASA2RRP1 2371 aa3.67□□□□□ -1.82
CDKAL1-201ENST00000274695 DEFB4AO15263 64 aa3.67□□□□□ -1.82
CDKAL1-201ENST00000274695 LCA10Q71F78 164 aa3.67□□□□□ -1.82
CDKAL1-201ENST00000274695 VWFP04275 2813 aa3.67□□□□□ -1.82
CDKAL1-201ENST00000274695 A6NN06 94 aa3.67□□□□□ -1.82
CDKAL1-201ENST00000274695 MOBPQ13875 183 aa3.67□□□□□ -1.82
CDKAL1-201ENST00000274695 PIEZO1Q92508 2521 aa3.66□□□□□ -1.82
CDKAL1-201ENST00000274695 FRAS1Q86XX4 4008 aa3.66□□□□□ -1.82
CDKAL1-201ENST00000274695 ATP11AUNQ6ZP68 121 aa3.65□□□□□ -1.82
CDKAL1-201ENST00000274695 DNAH2Q9P225 4427 aa3.65□□□□□ -1.83
CDKAL1-201ENST00000274695 LINC00208Q96KT6 92 aa3.65□□□□□ -1.83
CDKAL1-201ENST00000274695 DEFB131BA0A096LNP1 70 aa3.64□□□□□ -1.83
CDKAL1-201ENST00000274695 NAV2Q8IVL1 2488 aa3.64□□□□□ -1.83
CDKAL1-201ENST00000274695 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
CDKAL1-201ENST00000274695 PTPN13Q12923 2485 aa3.63□□□□□ -1.83
CDKAL1-201ENST00000274695 H0Y9P7 68 aa3.63□□□□□ -1.83
CDKAL1-201ENST00000274695 EPG5Q9HCE0 2579 aa3.63□□□□□ -1.83
CDKAL1-201ENST00000274695 ZNF861PO60384 105 aa3.63□□□□□ -1.83
CDKAL1-201ENST00000274695 FLNAP21333 2647 aaKnown RBP3.63□□□□□ -1.83
CDKAL1-201ENST00000274695 A8MUU9 505 aa3.62□□□□□ -1.83
CDKAL1-201ENST00000274695 LINC01554Q52M75 96 aa3.62□□□□□ -1.83
CDKAL1-201ENST00000274695 CASC2Q6XLA1 102 aa3.62□□□□□ -1.83
CDKAL1-201ENST00000274695 OTOGQ6ZRI0 2925 aa3.62□□□□□ -1.83
CDKAL1-201ENST00000274695 TLN2Q9Y4G6 2542 aa3.62□□□□□ -1.83
CDKAL1-201ENST00000274695 A0A1W2PNN7 141 aa3.62□□□□□ -1.83
CDKAL1-201ENST00000274695 KRTAP11-1Q8IUC1 163 aa3.62□□□□□ -1.83
CDKAL1-201ENST00000274695 CREBBPQ92793 2442 aa3.61□□□□□ -1.83
CDKAL1-201ENST00000274695 CENPEQ02224 2701 aa3.61□□□□□ -1.83
CDKAL1-201ENST00000274695 A0A096LNI7 61 aa3.61□□□□□ -1.83
CDKAL1-201ENST00000274695 PANO1I0J062 215 aa3.61□□□□□ -1.83
CDKAL1-201ENST00000274695 K7ERS5 55 aa3.61□□□□□ -1.83
CDKAL1-201ENST00000274695 XP32Q5T750 250 aa3.61□□□□□ -1.83
CDKAL1-201ENST00000274695 LRCOL1A6NCL2 159 aa3.61□□□□□ -1.83
CDKAL1-201ENST00000274695 Q6ZRN7 208 aaPredicted RBP3.61□□□□□ -1.83
CDKAL1-201ENST00000274695 GCN1Q92616 2671 aaKnown RBP3.6□□□□□ -1.83
CDKAL1-201ENST00000274695 COA5Q86WW8 74 aa3.6□□□□□ -1.83
CDKAL1-201ENST00000274695 DEFB105AQ8NG35 78 aa3.6□□□□□ -1.83
CDKAL1-201ENST00000274695 LRRK2Q5S007 2527 aa3.6□□□□□ -1.83
CDKAL1-201ENST00000274695 SPTBN4Q9H254 2564 aa3.6□□□□□ -1.83
CDKAL1-201ENST00000274695 A0A087WSZ3 146 aa3.6□□□□□ -1.83
CDKAL1-201ENST00000274695 MYO9AB2RTY4 2548 aa3.59□□□□□ -1.83
CDKAL1-201ENST00000274695 IGKV2-24A0A0C4DH68 120 aa3.59□□□□□ -1.84
CDKAL1-201ENST00000274695 TENM1Q9UKZ4 2725 aa3.58□□□□□ -1.84
CDKAL1-201ENST00000274695 HTN3P15516 51 aa3.58□□□□□ -1.84
CDKAL1-201ENST00000274695 KRTAP1-5Q9BYS1 174 aa3.58□□□□□ -1.84
CDKAL1-201ENST00000274695 JMJD1CQ15652 2540 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms