RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 CYSTM1Q9H1C7 97 aa9.38□□□□□ -0.91
CNOT9-201ENST00000273064 A0A1W2PNM2 257 aa9.38□□□□□ -0.91
CNOT9-201ENST00000273064 OBSCN-AS1Q96MR7 158 aa9.37□□□□□ -0.91
CNOT9-201ENST00000273064 IGFL1Q6UW32 110 aa9.36□□□□□ -0.91
CNOT9-201ENST00000273064 H0Y9P7 68 aa9.36□□□□□ -0.91
CNOT9-201ENST00000273064 TGP01266 2768 aa9.36□□□□□ -0.91
CNOT9-201ENST00000273064 RTL8CO15255 209 aa9.35□□□□□ -0.91
CNOT9-201ENST00000273064 SERP1Q9Y6X1 66 aa9.35□□□□□ -0.91
CNOT9-201ENST00000273064 SEC61GP60059 68 aa9.34□□□□□ -0.91
CNOT9-201ENST00000273064 SMIM26A0A096LP01 95 aa9.34□□□□□ -0.91
CNOT9-201ENST00000273064 KRTAP1-5Q9BYS1 174 aa9.34□□□□□ -0.91
CNOT9-201ENST00000273064 C1orf195Q5TG92 126 aa9.32□□□□□ -0.92
CNOT9-201ENST00000273064 LINC01600Q96MT4 127 aa9.32□□□□□ -0.92
CNOT9-201ENST00000273064 ZNF706Q9Y5V0 76 aaPredicted RBP9.32□□□□□ -0.92
CNOT9-201ENST00000273064 WIPF1O43516 503 aa9.29□□□□□ -0.92
CNOT9-201ENST00000273064 C1orf64Q8NEQ6 169 aa9.29□□□□□ -0.92
CNOT9-201ENST00000273064 C9orf163Q8N9P6 203 aa9.28□□□□□ -0.92
CNOT9-201ENST00000273064 KRTAP26-1Q6PEX3 210 aa9.28□□□□□ -0.92
CNOT9-201ENST00000273064 APLNQ9ULZ1 77 aa9.28□□□□□ -0.92
CNOT9-201ENST00000273064 ZNF469Q96JG9 3925 aaPredicted RBP9.27□□□□□ -0.93
CNOT9-201ENST00000273064 SPACA4Q8TDM5 124 aa9.26□□□□□ -0.93
CNOT9-201ENST00000273064 BCE1O60756 84 aa9.25□□□□□ -0.93
CNOT9-201ENST00000273064 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
CNOT9-201ENST00000273064 hDV103S1A0JD37 113 aa9.24□□□□□ -0.93
CNOT9-201ENST00000273064 H7BZZ5 65 aa9.24□□□□□ -0.93
CNOT9-201ENST00000273064 PRO0628Q9UI54 55 aa9.23□□□□□ -0.93
CNOT9-201ENST00000273064 DMBT1Q9UGM3 2413 aaPredicted RBP9.23□□□□□ -0.93
CNOT9-201ENST00000273064 A0A087WTM6 91 aa9.22□□□□□ -0.93
CNOT9-201ENST00000273064 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.22□□□□□ -0.93
CNOT9-201ENST00000273064 ATP5EP56381 51 aaPredicted RBP9.21□□□□□ -0.93
CNOT9-201ENST00000273064 A6NED7 52 aa9.21□□□□□ -0.94
CNOT9-201ENST00000273064 SRRM2Q9UQ35 2752 aaKnown RBP9.2□□□□□ -0.94
CNOT9-201ENST00000273064 PRR15LQ9BU68 103 aa9.19□□□□□ -0.94
CNOT9-201ENST00000273064 PSORS1C2Q9UIG4 136 aa9.19□□□□□ -0.94
CNOT9-201ENST00000273064 SPINK1P00995 79 aa9.19□□□□□ -0.94
CNOT9-201ENST00000273064 IGLV5-48A0A075B6I7 105 aa9.19□□□□□ -0.94
CNOT9-201ENST00000273064 RPS28P62857 69 aaKnown RBP9.17□□□□□ -0.94
CNOT9-201ENST00000273064 IGKV2D-30A0A075B6S6 120 aa9.16□□□□□ -0.94
CNOT9-201ENST00000273064 IGKV2-30P06310 120 aa9.16□□□□□ -0.94
CNOT9-201ENST00000273064 KLKP1Q107X0 134 aa9.15□□□□□ -0.94
CNOT9-201ENST00000273064 PLA2G2DQ9UNK4 145 aa9.15□□□□□ -0.94
CNOT9-201ENST00000273064 SMR3BP02814 79 aaPredicted RBP9.15□□□□□ -0.95
CNOT9-201ENST00000273064 DSCR10P59022 87 aa9.14□□□□□ -0.95
CNOT9-201ENST00000273064 CNBPP62633 177 aaKnown RBP9.14□□□□□ -0.95
CNOT9-201ENST00000273064 PANO1I0J062 215 aa9.13□□□□□ -0.95
CNOT9-201ENST00000273064 TNP2Q05952 138 aa9.13□□□□□ -0.95
CNOT9-201ENST00000273064 TRAV22A0A0B4J277 110 aa9.12□□□□□ -0.95
CNOT9-201ENST00000273064 A8MWP4 228 aa9.12□□□□□ -0.95
CNOT9-201ENST00000273064 PRR15Q8IV56 129 aa9.11□□□□□ -0.95
CNOT9-201ENST00000273064 SPAG11AQ6PDA7 123 aa9.11□□□□□ -0.95
CNOT9-201ENST00000273064 LINC00336Q6ZUF6 198 aa9.09□□□□□ -0.95
CNOT9-201ENST00000273064 FLG2Q5D862 2391 aaPredicted RBP9.08□□□□□ -0.96
CNOT9-201ENST00000273064 A0A1B0GW54 56 aa9.08□□□□□ -0.96
CNOT9-201ENST00000273064 ZNF861PO60384 105 aa9.08□□□□□ -0.96
CNOT9-201ENST00000273064 OCR1Q9BZK8 76 aa9.08□□□□□ -0.96
CNOT9-201ENST00000273064 IGLV5-37A0A075B6J1 123 aa9.06□□□□□ -0.96
CNOT9-201ENST00000273064 SPRR1AP35321 89 aa9.05□□□□□ -0.96
CNOT9-201ENST00000273064 SPRR4Q96PI1 79 aa9.05□□□□□ -0.96
CNOT9-201ENST00000273064 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
CNOT9-201ENST00000273064 A8MUN3 132 aa9.04□□□□□ -0.96
CNOT9-201ENST00000273064 KRTAP11-1Q8IUC1 163 aa9.04□□□□□ -0.96
CNOT9-201ENST00000273064 KRTAP7-1Q8IUC3 87 aa9.03□□□□□ -0.96
CNOT9-201ENST00000273064 PMAIP1Q13794 54 aa9.02□□□□□ -0.96
CNOT9-201ENST00000273064 WWC2-AS2Q96NR7 200 aa9.02□□□□□ -0.96
CNOT9-201ENST00000273064 C8orf17Q9NRJ1 99 aa9.01□□□□□ -0.97
CNOT9-201ENST00000273064 TYMSOSQ8TAI1 123 aa9□□□□□ -0.97
CNOT9-201ENST00000273064 OXTP01178 125 aa9□□□□□ -0.97
CNOT9-201ENST00000273064 LINC00313P59037 77 aa8.99□□□□□ -0.97
CNOT9-201ENST00000273064 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
CNOT9-201ENST00000273064 MRPL34Q9BQ48 92 aaKnown RBP8.98□□□□□ -0.97
CNOT9-201ENST00000273064 IGLV7-43P04211 117 aa8.97□□□□□ -0.97
CNOT9-201ENST00000273064 KRTAP4-16G5E9R7 235 aaPredicted RBP8.97□□□□□ -0.97
CNOT9-201ENST00000273064 A0A1B0GVX0 72 aa8.95□□□□□ -0.98
CNOT9-201ENST00000273064 FAM229BQ4G0N7 80 aa8.95□□□□□ -0.98
CNOT9-201ENST00000273064 Q96NJ1 140 aa8.94□□□□□ -0.98
CNOT9-201ENST00000273064 TP53AIP1Q9HCN2 124 aa8.94□□□□□ -0.98
CNOT9-201ENST00000273064 CSMD3Q7Z407 3707 aa8.93□□□□□ -0.98
CNOT9-201ENST00000273064 FBN3Q75N90 2809 aa8.92□□□□□ -0.98
CNOT9-201ENST00000273064 COA5Q86WW8 74 aa8.92□□□□□ -0.98
CNOT9-201ENST00000273064 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
CNOT9-201ENST00000273064 ANK3Q12955 4377 aaKnown RBP8.91□□□□□ -0.98
CNOT9-201ENST00000273064 C9orf92A6NGG3 77 aa8.9□□□□□ -0.98
CNOT9-201ENST00000273064 LIMD2Q9BT23 127 aa8.88□□□□□ -0.99
CNOT9-201ENST00000273064 KRTAP10-2P60368 255 aa8.87□□□□□ -0.99
CNOT9-201ENST00000273064 C7orf65Q6ZTY9 151 aa8.87□□□□□ -0.99
CNOT9-201ENST00000273064 FP248Q71RG6 208 aaPredicted RBP8.85□□□□□ -0.99
CNOT9-201ENST00000273064 PRR26Q8N8Z3 221 aa8.85□□□□□ -0.99
CNOT9-201ENST00000273064 Q5XG85 94 aa8.85□□□□□ -0.99
CNOT9-201ENST00000273064 LINC00472Q9H8W2 130 aa8.83□□□□□ -1
CNOT9-201ENST00000273064 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
CNOT9-201ENST00000273064 H3BPC8 53 aa8.82□□□□□ -1
CNOT9-201ENST00000273064 MMP24-AS1A0A0U1RRL7 71 aa8.81□□□□□ -1
CNOT9-201ENST00000273064 ACYP2P14621 99 aa8.8□□□□□ -1
CNOT9-201ENST00000273064 A0A1B0GU69 56 aa8.78□□□□□ -1
CNOT9-201ENST00000273064 A0A087X002 238 aa8.77□□□□□ -1.01
CNOT9-201ENST00000273064 NOTCH2NLQ7Z3S9 236 aa8.77□□□□□ -1.01
CNOT9-201ENST00000273064 LOC101927531A0A1B0GV80 90 aa8.77□□□□□ -1.01
CNOT9-201ENST00000273064 Q8N9P0 234 aaPredicted RBP8.77□□□□□ -1.01
CNOT9-201ENST00000273064 FAM229AH3BQW9 127 aa8.76□□□□□ -1.01
CNOT9-201ENST00000273064 PLAC8Q9NZF1 115 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms