RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 A0A0D9SG42 100 aa8.13□□□□□ -1.11
SMG9-201ENST00000270066 KRTAP1-5Q9BYS1 174 aa8.13□□□□□ -1.11
SMG9-201ENST00000270066 Q5VV11 94 aa8.13□□□□□ -1.11
SMG9-201ENST00000270066 H3BS24 57 aa8.12□□□□□ -1.11
SMG9-201ENST00000270066 ZCCHC13Q8WW36 166 aaKnown RBP8.11□□□□□ -1.11
SMG9-201ENST00000270066 KRTAP26-1Q6PEX3 210 aa8.1□□□□□ -1.11
SMG9-201ENST00000270066 MMP24-AS1A0A0U1RRL7 71 aa8.1□□□□□ -1.11
SMG9-201ENST00000270066 TRANK1O15050 2925 aa8.08□□□□□ -1.12
SMG9-201ENST00000270066 HRES1P13985 223 aa8.08□□□□□ -1.12
SMG9-201ENST00000270066 LINC01558Q9Y6Z2 57 aa8.07□□□□□ -1.12
SMG9-201ENST00000270066 LAMA2P24043 3122 aaKnown RBP8.06□□□□□ -1.12
SMG9-201ENST00000270066 Q5VSD8 79 aa8.06□□□□□ -1.12
SMG9-201ENST00000270066 SPINK7P58062 85 aa8.05□□□□□ -1.12
SMG9-201ENST00000270066 KRTAP10-1P60331 282 aa8.04□□□□□ -1.12
SMG9-201ENST00000270066 M0R2T5 61 aa8.04□□□□□ -1.12
SMG9-201ENST00000270066 LINC00472Q9H8W2 130 aa8.03□□□□□ -1.12
SMG9-201ENST00000270066 UNC80Q8N2C7 3258 aa8.02□□□□□ -1.13
SMG9-201ENST00000270066 ZNF292O60281 2723 aa8.01□□□□□ -1.13
SMG9-201ENST00000270066 KRTAP10-2P60368 255 aa8.01□□□□□ -1.13
SMG9-201ENST00000270066 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
SMG9-201ENST00000270066 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
SMG9-201ENST00000270066 PRUNE2Q8WUY3 3088 aa7.99□□□□□ -1.13
SMG9-201ENST00000270066 S4R3F8 94 aa7.99□□□□□ -1.13
SMG9-201ENST00000270066 AKAP13Q12802 2813 aa7.98□□□□□ -1.13
SMG9-201ENST00000270066 CDH23Q9H251 3354 aa7.98□□□□□ -1.13
SMG9-201ENST00000270066 A0A1B0GU33 70 aa7.98□□□□□ -1.13
SMG9-201ENST00000270066 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
SMG9-201ENST00000270066 Q5W150 140 aa7.97□□□□□ -1.13
SMG9-201ENST00000270066 Q6ZR54 194 aa7.96□□□□□ -1.13
SMG9-201ENST00000270066 CAMK2N1Q7Z7J9 78 aa7.95□□□□□ -1.14
SMG9-201ENST00000270066 CENPEQ02224 2701 aa7.93□□□□□ -1.14
SMG9-201ENST00000270066 CHD6Q8TD26 2715 aa7.9□□□□□ -1.14
SMG9-201ENST00000270066 FREM2Q5SZK8 3169 aa7.89□□□□□ -1.15
SMG9-201ENST00000270066 DMAC1Q96GE9 116 aa7.88□□□□□ -1.15
SMG9-201ENST00000270066 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
SMG9-201ENST00000270066 PANO1I0J062 215 aa7.86□□□□□ -1.15
SMG9-201ENST00000270066 XIRP2A4UGR9 3374 aa7.85□□□□□ -1.15
SMG9-201ENST00000270066 MGAQ8IWI9 3026 aa7.85□□□□□ -1.15
SMG9-201ENST00000270066 LUZP6Q538Z0 58 aa7.85□□□□□ -1.15
SMG9-201ENST00000270066 TEX15Q9BXT5 2789 aa7.84□□□□□ -1.15
SMG9-201ENST00000270066 STAB1Q9NY15 2570 aa7.82□□□□□ -1.16
SMG9-201ENST00000270066 UNC79Q9P2D8 2635 aa7.82□□□□□ -1.16
SMG9-201ENST00000270066 TEP1Q99973 2627 aaKnown RBP7.81□□□□□ -1.16
SMG9-201ENST00000270066 SZT2Q5T011 3432 aa7.8□□□□□ -1.16
SMG9-201ENST00000270066 TRIOO75962 3097 aa7.8□□□□□ -1.16
SMG9-201ENST00000270066 IGSF10Q6WRI0 2623 aa7.8□□□□□ -1.16
SMG9-201ENST00000270066 GCN1Q92616 2671 aaKnown RBP7.79□□□□□ -1.16
SMG9-201ENST00000270066 R4GN34 69 aa7.79□□□□□ -1.16
SMG9-201ENST00000270066 COL6A5A8TX70 2615 aa7.78□□□□□ -1.16
SMG9-201ENST00000270066 KRTAP21-3Q3LHN1 58 aa7.77□□□□□ -1.17
SMG9-201ENST00000270066 Q6ZRN7 208 aaPredicted RBP7.76□□□□□ -1.17
SMG9-201ENST00000270066 WDFY4Q6ZS81 3184 aa7.75□□□□□ -1.17
SMG9-201ENST00000270066 A0A087X002 238 aa7.75□□□□□ -1.17
SMG9-201ENST00000270066 BAHCC1Q9P281 2608 aa7.75□□□□□ -1.17
SMG9-201ENST00000270066 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
SMG9-201ENST00000270066 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
SMG9-201ENST00000270066 MAP1AP78559 2803 aaPredicted RBP7.71□□□□□ -1.17
SMG9-201ENST00000270066 NBEAL1Q6ZS30 2694 aa7.71□□□□□ -1.17
SMG9-201ENST00000270066 FRYQ5TBA9 3013 aa7.71□□□□□ -1.18
SMG9-201ENST00000270066 NBEAL2Q6ZNJ1 2754 aa7.71□□□□□ -1.18
SMG9-201ENST00000270066 ASB16-AS1Q495Z4 193 aa7.71□□□□□ -1.18
SMG9-201ENST00000270066 A8MU10 97 aa7.7□□□□□ -1.18
SMG9-201ENST00000270066 DNAH14Q0VDD8 3507 aa7.69□□□□□ -1.18
SMG9-201ENST00000270066 NOTCH1P46531 2555 aa7.69□□□□□ -1.18
SMG9-201ENST00000270066 VPS13AQ96RL7 3174 aa7.68□□□□□ -1.18
SMG9-201ENST00000270066 A6NN06 94 aa7.68□□□□□ -1.18
SMG9-201ENST00000270066 SETXQ7Z333 2677 aaKnown RBP7.67□□□□□ -1.18
SMG9-201ENST00000270066 DSPP15924 2871 aaKnown RBP7.66□□□□□ -1.18
SMG9-201ENST00000270066 KRTAP11-1Q8IUC1 163 aa7.64□□□□□ -1.19
SMG9-201ENST00000270066 CELSR3Q9NYQ7 3312 aa7.64□□□□□ -1.19
SMG9-201ENST00000270066 M0QZ58 72 aa7.63□□□□□ -1.19
SMG9-201ENST00000270066 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
SMG9-201ENST00000270066 ROMO1P60602 79 aa7.63□□□□□ -1.19
SMG9-201ENST00000270066 VCANP13611 3396 aa7.62□□□□□ -1.19
SMG9-201ENST00000270066 H1FX-AS1Q4G0G2 97 aa7.62□□□□□ -1.19
SMG9-201ENST00000270066 ADM2Q7Z4H4 148 aa7.62□□□□□ -1.19
SMG9-201ENST00000270066 NBEAQ8NFP9 2946 aa7.62□□□□□ -1.19
SMG9-201ENST00000270066 SPATA8Q6RVD6 105 aa7.6□□□□□ -1.19
SMG9-201ENST00000270066 FLG2Q5D862 2391 aaPredicted RBP7.6□□□□□ -1.19
SMG9-201ENST00000270066 KRTAP7-1Q8IUC3 87 aa7.6□□□□□ -1.19
SMG9-201ENST00000270066 NOTCH2NLQ7Z3S9 236 aa7.59□□□□□ -1.19
SMG9-201ENST00000270066 LAMA1P25391 3075 aa7.59□□□□□ -1.19
SMG9-201ENST00000270066 A0A0A0MQY5 61 aa7.59□□□□□ -1.2
SMG9-201ENST00000270066 DMBT1Q9UGM3 2413 aaPredicted RBP7.58□□□□□ -1.2
SMG9-201ENST00000270066 KALRNO60229 2985 aa7.58□□□□□ -1.2
SMG9-201ENST00000270066 ITPR2Q14571 2701 aa7.58□□□□□ -1.2
SMG9-201ENST00000270066 KRTAP13-1Q8IUC0 172 aa7.57□□□□□ -1.2
SMG9-201ENST00000270066 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
SMG9-201ENST00000270066 KMT2BQ9UMN6 2715 aaPredicted RBP7.55□□□□□ -1.2
SMG9-201ENST00000270066 KRTAP13-2Q52LG2 175 aa7.54□□□□□ -1.2
SMG9-201ENST00000270066 SPTBN5Q9NRC6 3674 aaKnown RBP7.53□□□□□ -1.2
SMG9-201ENST00000270066 NSD1Q96L73 2696 aaPredicted RBP7.52□□□□□ -1.21
SMG9-201ENST00000270066 EYSQ5T1H1 3165 aa7.51□□□□□ -1.21
SMG9-201ENST00000270066 UBR5O95071 2799 aaPredicted RBP7.5□□□□□ -1.21
SMG9-201ENST00000270066 COL6A3P12111 3177 aa7.5□□□□□ -1.21
SMG9-201ENST00000270066 KRTAP25-1Q3LHN0 102 aa7.47□□□□□ -1.21
SMG9-201ENST00000270066 ITPR1Q14643 2758 aa7.44□□□□□ -1.22
SMG9-201ENST00000270066 SPEGQ15772 3267 aa7.44□□□□□ -1.22
SMG9-201ENST00000270066 ASH1LQ9NR48 2969 aaKnown RBP7.42□□□□□ -1.22
SMG9-201ENST00000270066 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms