RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 WFDC13Q8IUB5 93 aa17.38■□□□□ 0.37
CBX4-201ENST00000269397 C1orf64Q8NEQ6 169 aa17.38■□□□□ 0.37
CBX4-201ENST00000269397 A0A087WSZ3 146 aa17.35■□□□□ 0.37
CBX4-201ENST00000269397 RPL37AP61513 92 aaKnown RBP17.34■□□□□ 0.37
CBX4-201ENST00000269397 DNAH10Q8IVF4 4471 aa17.33■□□□□ 0.36
CBX4-201ENST00000269397 A0A096LNI7 61 aa17.32■□□□□ 0.36
CBX4-201ENST00000269397 LYSTQ99698 3801 aa17.32■□□□□ 0.36
CBX4-201ENST00000269397 CSMD3Q7Z407 3707 aa17.29■□□□□ 0.36
CBX4-201ENST00000269397 KRTAP24-1Q3LI83 254 aa17.27■□□□□ 0.35
CBX4-201ENST00000269397 DNAH3Q8TD57 4116 aa17.21■□□□□ 0.35
CBX4-201ENST00000269397 KRTAP1-5Q9BYS1 174 aa17.2■□□□□ 0.34
CBX4-201ENST00000269397 UBE2AP49459 152 aa17.2■□□□□ 0.34
CBX4-201ENST00000269397 KRTAP11-1Q8IUC1 163 aa17.19■□□□□ 0.34
CBX4-201ENST00000269397 LINC00208Q96KT6 92 aa17.18■□□□□ 0.34
CBX4-201ENST00000269397 PSPHP1O15172 72 aa17.17■□□□□ 0.34
CBX4-201ENST00000269397 CHTF8P0CG12 524 aa17.17■□□□□ 0.34
CBX4-201ENST00000269397 C16orf90A8MZG2 172 aa17.16■□□□□ 0.34
CBX4-201ENST00000269397 MP68P56378 58 aa17.14■□□□□ 0.33
CBX4-201ENST00000269397 PHF5AQ7RTV0 110 aaKnown RBP17.14■□□□□ 0.33
CBX4-201ENST00000269397 IGLV8-61A0A075B6I0 122 aa17.13■□□□□ 0.33
CBX4-201ENST00000269397 Q1T7F1 81 aa17.12■□□□□ 0.33
CBX4-201ENST00000269397 HUWE1Q7Z6Z7 4374 aaKnown RBP17.12■□□□□ 0.33
CBX4-201ENST00000269397 STAB2Q8WWQ8 2551 aa17.11■□□□□ 0.33
CBX4-201ENST00000269397 CYP4F30PQ9H0H9 118 aa17.11■□□□□ 0.33
CBX4-201ENST00000269397 TENM2Q9NT68 2774 aa17.1■□□□□ 0.33
CBX4-201ENST00000269397 TRAV22A0A0B4J277 110 aa17.1■□□□□ 0.33
CBX4-201ENST00000269397 KRTAP29-1A8MX34 341 aaPredicted RBP17.09■□□□□ 0.33
CBX4-201ENST00000269397 CASC2Q6XLA1 102 aa17.08■□□□□ 0.32
CBX4-201ENST00000269397 DNAH9Q9NYC9 4486 aa17.07■□□□□ 0.32
CBX4-201ENST00000269397 NDUFB1O75438 58 aa17.06■□□□□ 0.32
CBX4-201ENST00000269397 CNBPP62633 177 aaKnown RBP17.06■□□□□ 0.32
CBX4-201ENST00000269397 COL7A1Q02388 2944 aa17.06■□□□□ 0.32
CBX4-201ENST00000269397 C1orf195Q5TG92 126 aa17.05■□□□□ 0.32
CBX4-201ENST00000269397 H0Y9P7 68 aa17.05■□□□□ 0.32
CBX4-201ENST00000269397 PRR15Q8IV56 129 aa17.03■□□□□ 0.32
CBX4-201ENST00000269397 B9D2Q9BPU9 175 aa17■□□□□ 0.31
CBX4-201ENST00000269397 MGAM2Q2M2H8 2515 aa17■□□□□ 0.31
CBX4-201ENST00000269397 K7EIL1 84 aa16.99■□□□□ 0.31
CBX4-201ENST00000269397 LINC00472Q9H8W2 130 aa16.98■□□□□ 0.31
CBX4-201ENST00000269397 A8MUN3 132 aa16.96■□□□□ 0.31
CBX4-201ENST00000269397 A8MWP4 228 aa16.96■□□□□ 0.31
CBX4-201ENST00000269397 H0Y9J4 135 aa16.95■□□□□ 0.3
CBX4-201ENST00000269397 UBE2DNLQ8IWF7 75 aa16.92■□□□□ 0.3
CBX4-201ENST00000269397 SPRR1BP22528 89 aa16.9■□□□□ 0.3
CBX4-201ENST00000269397 DNAH7Q8WXX0 4024 aa16.88■□□□□ 0.29
CBX4-201ENST00000269397 PANO1I0J062 215 aa16.86■□□□□ 0.29
CBX4-201ENST00000269397 A8MU10 97 aa16.85■□□□□ 0.29
CBX4-201ENST00000269397 MMP24-AS1A0A0U1RRL7 71 aa16.83■□□□□ 0.28
CBX4-201ENST00000269397 SPANXA2-OT1Q8N9U9 137 aa16.83■□□□□ 0.28
CBX4-201ENST00000269397 IGLV9-49A0A0B4J1Y8 123 aa16.81■□□□□ 0.28
CBX4-201ENST00000269397 H3BPC8 53 aa16.8■□□□□ 0.28
CBX4-201ENST00000269397 C9orf163Q8N9P6 203 aa16.8■□□□□ 0.28
CBX4-201ENST00000269397 Q5VV11 94 aa16.79■□□□□ 0.28
CBX4-201ENST00000269397 C14orf177Q52M58 125 aa16.77■□□□□ 0.28
CBX4-201ENST00000269397 V9GYY9 64 aa16.77■□□□□ 0.28
CBX4-201ENST00000269397 Q8N9P0 234 aaPredicted RBP16.76■□□□□ 0.27
CBX4-201ENST00000269397 PCOTHQ58A44 107 aa16.75■□□□□ 0.27
CBX4-201ENST00000269397 APLNQ9ULZ1 77 aa16.73■□□□□ 0.27
CBX4-201ENST00000269397 KRTAP13-1Q8IUC0 172 aa16.7■□□□□ 0.26
CBX4-201ENST00000269397 PRR15LQ9BU68 103 aa16.7■□□□□ 0.26
CBX4-201ENST00000269397 Q96NJ1 140 aa16.69■□□□□ 0.26
CBX4-201ENST00000269397 CHKB-CPT1BH3BT56 60 aa16.69■□□□□ 0.26
CBX4-201ENST00000269397 COA5Q86WW8 74 aa16.67■□□□□ 0.26
CBX4-201ENST00000269397 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.64■□□□□ 0.25
CBX4-201ENST00000269397 LIMD2Q9BT23 127 aa16.62■□□□□ 0.25
CBX4-201ENST00000269397 IGLV7-46A0A075B6I9 117 aa16.62■□□□□ 0.25
CBX4-201ENST00000269397 PMAIP1Q13794 54 aa16.62■□□□□ 0.25
CBX4-201ENST00000269397 NDUFS5O43920 106 aa16.61■□□□□ 0.25
CBX4-201ENST00000269397 CD164Q04900 197 aa16.61■□□□□ 0.25
CBX4-201ENST00000269397 MOBPQ13875 183 aa16.61■□□□□ 0.25
CBX4-201ENST00000269397 IGHV6-1A0A0B4J1U7 121 aa16.61■□□□□ 0.25
CBX4-201ENST00000269397 PLECQ15149 4684 aaKnown RBP16.58■□□□□ 0.25
CBX4-201ENST00000269397 C8orf17Q9NRJ1 99 aa16.58■□□□□ 0.25
CBX4-201ENST00000269397 ANAPC11Q9NYG5 84 aa16.58■□□□□ 0.25
CBX4-201ENST00000269397 NBDYA0A0U1RRE5 68 aa16.56■□□□□ 0.24
CBX4-201ENST00000269397 ASB16-AS1Q495Z4 193 aa16.54■□□□□ 0.24
CBX4-201ENST00000269397 Q6ZRN7 208 aaPredicted RBP16.52■□□□□ 0.24
CBX4-201ENST00000269397 SPACA4Q8TDM5 124 aa16.51■□□□□ 0.23
CBX4-201ENST00000269397 TP53AIP1Q9HCN2 124 aa16.51■□□□□ 0.23
CBX4-201ENST00000269397 A0A087X002 238 aa16.5■□□□□ 0.23
CBX4-201ENST00000269397 NOTCH2NLQ7Z3S9 236 aa16.5■□□□□ 0.23
CBX4-201ENST00000269397 FRAS1Q86XX4 4008 aa16.49■□□□□ 0.23
CBX4-201ENST00000269397 SEC61GP60059 68 aa16.49■□□□□ 0.23
CBX4-201ENST00000269397 MDFIQ99750 246 aa16.49■□□□□ 0.23
CBX4-201ENST00000269397 A0A1B0GVX0 72 aa16.48■□□□□ 0.23
CBX4-201ENST00000269397 SPAG11AQ6PDA7 123 aa16.47■□□□□ 0.23
CBX4-201ENST00000269397 SPTSSBQ8NFR3 76 aa16.46■□□□□ 0.23
CBX4-201ENST00000269397 Q6ZR54 194 aa16.46■□□□□ 0.23
CBX4-201ENST00000269397 A6NED7 52 aa16.45■□□□□ 0.22
CBX4-201ENST00000269397 LCA10Q71F78 164 aa16.44■□□□□ 0.22
CBX4-201ENST00000269397 WWC2-AS2Q96NR7 200 aa16.44■□□□□ 0.22
CBX4-201ENST00000269397 CDK2AP2O75956 126 aa16.43■□□□□ 0.22
CBX4-201ENST00000269397 LINC00483Q53H64 154 aa16.43■□□□□ 0.22
CBX4-201ENST00000269397 DYNC2H1Q8NCM8 4307 aaKnown RBP16.43■□□□□ 0.22
CBX4-201ENST00000269397 Q75L30 129 aa16.42■□□□□ 0.22
CBX4-201ENST00000269397 PSORS1C2Q9UIG4 136 aa16.42■□□□□ 0.22
CBX4-201ENST00000269397 LOC101927531A0A1B0GV80 90 aa16.4■□□□□ 0.22
CBX4-201ENST00000269397 MRPL34Q9BQ48 92 aaKnown RBP16.4■□□□□ 0.22
CBX4-201ENST00000269397 SPINK6Q6UWN8 80 aa16.36■□□□□ 0.21
CBX4-201ENST00000269397 HRES1P13985 223 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms