RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PRR15Q8IV56 129 aa7.49□□□□□ -1.21
VPS33A-201ENST00000267199 LOC101927531A0A1B0GV80 90 aa7.48□□□□□ -1.21
VPS33A-201ENST00000267199 NF1P21359 2839 aa7.47□□□□□ -1.21
VPS33A-201ENST00000267199 CASC10Q5T4H9 136 aa7.47□□□□□ -1.21
VPS33A-201ENST00000267199 CYP4F30PQ9H0H9 118 aa7.47□□□□□ -1.21
VPS33A-201ENST00000267199 MUC3AQ02505 3323 aa7.46□□□□□ -1.21
VPS33A-201ENST00000267199 CELSR2Q9HCU4 2923 aa7.46□□□□□ -1.21
VPS33A-201ENST00000267199 NSD1Q96L73 2696 aaPredicted RBP7.46□□□□□ -1.22
VPS33A-201ENST00000267199 C1orf134Q5TEV5 83 aa7.45□□□□□ -1.22
VPS33A-201ENST00000267199 IGLV5-48A0A075B6I7 105 aa7.45□□□□□ -1.22
VPS33A-201ENST00000267199 CD164Q04900 197 aa7.45□□□□□ -1.22
VPS33A-201ENST00000267199 NBDYA0A0U1RRE5 68 aa7.44□□□□□ -1.22
VPS33A-201ENST00000267199 DCHS1Q96JQ0 3298 aa7.44□□□□□ -1.22
VPS33A-201ENST00000267199 K7EIL1 84 aa7.44□□□□□ -1.22
VPS33A-201ENST00000267199 C7orf65Q6ZTY9 151 aa7.44□□□□□ -1.22
VPS33A-201ENST00000267199 TLX1NBP0CAT3 122 aa7.43□□□□□ -1.22
VPS33A-201ENST00000267199 DSCR10P59022 87 aa7.43□□□□□ -1.22
VPS33A-201ENST00000267199 FBN2P35556 2912 aa7.43□□□□□ -1.22
VPS33A-201ENST00000267199 SPACA4Q8TDM5 124 aa7.42□□□□□ -1.22
VPS33A-201ENST00000267199 MRPL34Q9BQ48 92 aaKnown RBP7.42□□□□□ -1.22
VPS33A-201ENST00000267199 CRYBG3Q68DQ2 2970 aa7.41□□□□□ -1.22
VPS33A-201ENST00000267199 KTN1-AS1Q86SY8 53 aa7.41□□□□□ -1.22
VPS33A-201ENST00000267199 C8orf87E5RJ46 101 aa7.41□□□□□ -1.22
VPS33A-201ENST00000267199 DMDP11532 3685 aa7.4□□□□□ -1.22
VPS33A-201ENST00000267199 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.22
VPS33A-201ENST00000267199 APCP25054 2843 aa7.4□□□□□ -1.23
VPS33A-201ENST00000267199 ASPMQ8IZT6 3477 aa7.4□□□□□ -1.23
VPS33A-201ENST00000267199 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.23
VPS33A-201ENST00000267199 BAHCC1Q9P281 2608 aa7.39□□□□□ -1.23
VPS33A-201ENST00000267199 Q1T7F1 81 aa7.39□□□□□ -1.23
VPS33A-201ENST00000267199 DCHS2Q6V1P9 2916 aa7.38□□□□□ -1.23
VPS33A-201ENST00000267199 ANAPC11Q9NYG5 84 aa7.37□□□□□ -1.23
VPS33A-201ENST00000267199 RELNP78509 3460 aa7.37□□□□□ -1.23
VPS33A-201ENST00000267199 RTL8CO15255 209 aa7.36□□□□□ -1.23
VPS33A-201ENST00000267199 LINC00313P59037 77 aa7.36□□□□□ -1.23
VPS33A-201ENST00000267199 HIVEP1P15822 2718 aa7.35□□□□□ -1.23
VPS33A-201ENST00000267199 NIPBLQ6KC79 2804 aaeCLIP7.35□□□□□ -1.23
VPS33A-201ENST00000267199 PRR26Q8N8Z3 221 aa7.35□□□□□ -1.23
VPS33A-201ENST00000267199 SPANXA2-OT1Q8N9U9 137 aa7.34□□□□□ -1.24
VPS33A-201ENST00000267199 C9orf163Q8N9P6 203 aa7.33□□□□□ -1.24
VPS33A-201ENST00000267199 LAMA5O15230 3695 aa7.33□□□□□ -1.24
VPS33A-201ENST00000267199 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
VPS33A-201ENST00000267199 SPRR4Q96PI1 79 aa7.33□□□□□ -1.24
VPS33A-201ENST00000267199 ZFHX4Q86UP3 3567 aa7.32□□□□□ -1.24
VPS33A-201ENST00000267199 UQCR11O14957 56 aa7.31□□□□□ -1.24
VPS33A-201ENST00000267199 IGLV5-37A0A075B6J1 123 aa7.3□□□□□ -1.24
VPS33A-201ENST00000267199 MXRA5Q9NR99 2828 aa7.3□□□□□ -1.24
VPS33A-201ENST00000267199 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
VPS33A-201ENST00000267199 STAB2Q8WWQ8 2551 aa7.3□□□□□ -1.24
VPS33A-201ENST00000267199 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
VPS33A-201ENST00000267199 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
VPS33A-201ENST00000267199 Q8N9P0 234 aaPredicted RBP7.28□□□□□ -1.24
VPS33A-201ENST00000267199 LCA10Q71F78 164 aa7.28□□□□□ -1.24
VPS33A-201ENST00000267199 CNBPP62633 177 aaKnown RBP7.28□□□□□ -1.24
VPS33A-201ENST00000267199 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
VPS33A-201ENST00000267199 Q5VV11 94 aa7.24□□□□□ -1.25
VPS33A-201ENST00000267199 Q96NJ1 140 aa7.24□□□□□ -1.25
VPS33A-201ENST00000267199 APLNQ9ULZ1 77 aa7.24□□□□□ -1.25
VPS33A-201ENST00000267199 A0A087WTM6 91 aa7.23□□□□□ -1.25
VPS33A-201ENST00000267199 KRTAP26-1Q6PEX3 210 aa7.23□□□□□ -1.25
VPS33A-201ENST00000267199 ZNF861PO60384 105 aa7.22□□□□□ -1.25
VPS33A-201ENST00000267199 IGLV7-46A0A075B6I9 117 aa7.22□□□□□ -1.25
VPS33A-201ENST00000267199 SPRR1AP35321 89 aa7.21□□□□□ -1.25
VPS33A-201ENST00000267199 PSORS1C2Q9UIG4 136 aa7.21□□□□□ -1.26
VPS33A-201ENST00000267199 Q75L30 129 aa7.2□□□□□ -1.26
VPS33A-201ENST00000267199 SSBP3-AS1Q7Z2R9 100 aa7.2□□□□□ -1.26
VPS33A-201ENST00000267199 PRAC1Q96KF2 57 aa7.2□□□□□ -1.26
VPS33A-201ENST00000267199 DMBT1Q9UGM3 2413 aaPredicted RBP7.18□□□□□ -1.26
VPS33A-201ENST00000267199 KMT2BQ9UMN6 2715 aaPredicted RBP7.18□□□□□ -1.26
VPS33A-201ENST00000267199 TYMSOSQ8TAI1 123 aa7.18□□□□□ -1.26
VPS33A-201ENST00000267199 MMP24-AS1A0A0U1RRL7 71 aa7.17□□□□□ -1.26
VPS33A-201ENST00000267199 SPINK7P58062 85 aa7.15□□□□□ -1.27
VPS33A-201ENST00000267199 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
VPS33A-201ENST00000267199 Q8N1X5 172 aa7.14□□□□□ -1.27
VPS33A-201ENST00000267199 SMG1Q96Q15 3661 aaKnown RBP7.13□□□□□ -1.27
VPS33A-201ENST00000267199 LINC01558Q9Y6Z2 57 aa7.13□□□□□ -1.27
VPS33A-201ENST00000267199 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
VPS33A-201ENST00000267199 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
VPS33A-201ENST00000267199 PLA2G1BP04054 148 aaKnown RBP7.12□□□□□ -1.27
VPS33A-201ENST00000267199 HRES1P13985 223 aa7.12□□□□□ -1.27
VPS33A-201ENST00000267199 IGLV7-43P04211 117 aa7.11□□□□□ -1.27
VPS33A-201ENST00000267199 CSMD1Q96PZ7 3565 aa7.11□□□□□ -1.27
VPS33A-201ENST00000267199 LINC00472Q9H8W2 130 aa7.11□□□□□ -1.27
VPS33A-201ENST00000267199 TNP2Q05952 138 aa7.11□□□□□ -1.27
VPS33A-201ENST00000267199 CELSR1Q9NYQ6 3014 aa7.1□□□□□ -1.27
VPS33A-201ENST00000267199 WWC2-AS2Q96NR7 200 aa7.08□□□□□ -1.28
VPS33A-201ENST00000267199 C9orf92A6NGG3 77 aa7.06□□□□□ -1.28
VPS33A-201ENST00000267199 KRTAP4-16G5E9R7 235 aaPredicted RBP7.06□□□□□ -1.28
VPS33A-201ENST00000267199 ZCCHC13Q8WW36 166 aaKnown RBP7.06□□□□□ -1.28
VPS33A-201ENST00000267199 A8MU10 97 aa7.05□□□□□ -1.28
VPS33A-201ENST00000267199 FLG2Q5D862 2391 aaPredicted RBP7.05□□□□□ -1.28
VPS33A-201ENST00000267199 LINC01554Q52M75 96 aa7.05□□□□□ -1.28
VPS33A-201ENST00000267199 SPRR1BP22528 89 aa7.03□□□□□ -1.28
VPS33A-201ENST00000267199 KRTAP29-1A8MX34 341 aaPredicted RBP7□□□□□ -1.29
VPS33A-201ENST00000267199 A0A0D9SG42 100 aa6.99□□□□□ -1.29
VPS33A-201ENST00000267199 H3BS24 57 aa6.99□□□□□ -1.29
VPS33A-201ENST00000267199 SMR3BP02814 79 aaPredicted RBP6.98□□□□□ -1.29
VPS33A-201ENST00000267199 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
VPS33A-201ENST00000267199 LINC00304Q8N9R0 145 aa6.98□□□□□ -1.29
VPS33A-201ENST00000267199 SVEP1Q4LDE5 3571 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms