RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 IGLV7-46A0A075B6I9 117 aa7.75□□□□□ -1.17
CHMP2B-201ENST00000263780 INAFM1C9JVW0 142 aa7.75□□□□□ -1.17
CHMP2B-201ENST00000263780 SPRR1BP22528 89 aa7.75□□□□□ -1.17
CHMP2B-201ENST00000263780 ATP11AUNQ6ZP68 121 aa7.75□□□□□ -1.17
CHMP2B-201ENST00000263780 LINC00472Q9H8W2 130 aa7.75□□□□□ -1.17
CHMP2B-201ENST00000263780 LOC101927531A0A1B0GV80 90 aa7.75□□□□□ -1.17
CHMP2B-201ENST00000263780 C16orf90A8MZG2 172 aa7.75□□□□□ -1.17
CHMP2B-201ENST00000263780 UNC79Q9P2D8 2635 aa7.74□□□□□ -1.17
CHMP2B-201ENST00000263780 H0Y9J4 135 aa7.73□□□□□ -1.17
CHMP2B-201ENST00000263780 COA5Q86WW8 74 aa7.73□□□□□ -1.17
CHMP2B-201ENST00000263780 HIVEP1P15822 2718 aa7.73□□□□□ -1.17
CHMP2B-201ENST00000263780 KRTAP10-11P60412 298 aa7.73□□□□□ -1.17
CHMP2B-201ENST00000263780 OXLD1Q5BKU9 147 aa7.73□□□□□ -1.17
CHMP2B-201ENST00000263780 NOTCH2Q04721 2471 aa7.73□□□□□ -1.17
CHMP2B-201ENST00000263780 KTN1-AS1Q86SY8 53 aa7.72□□□□□ -1.17
CHMP2B-201ENST00000263780 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
CHMP2B-201ENST00000263780 A6NED7 52 aa7.71□□□□□ -1.17
CHMP2B-201ENST00000263780 NDUFS5O43920 106 aa7.7□□□□□ -1.18
CHMP2B-201ENST00000263780 A0A096LNI7 61 aa7.7□□□□□ -1.18
CHMP2B-201ENST00000263780 SPTSSBQ8NFR3 76 aa7.69□□□□□ -1.18
CHMP2B-201ENST00000263780 IGKV2-24A0A0C4DH68 120 aa7.68□□□□□ -1.18
CHMP2B-201ENST00000263780 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
CHMP2B-201ENST00000263780 A8MU10 97 aa7.68□□□□□ -1.18
CHMP2B-201ENST00000263780 J3QKU1 62 aa7.68□□□□□ -1.18
CHMP2B-201ENST00000263780 CDC42SE1Q9NRR8 79 aa7.67□□□□□ -1.18
CHMP2B-201ENST00000263780 LCA10Q71F78 164 aa7.66□□□□□ -1.18
CHMP2B-201ENST00000263780 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
CHMP2B-201ENST00000263780 MOBPQ13875 183 aa7.65□□□□□ -1.18
CHMP2B-201ENST00000263780 TENM4Q6N022 2769 aa7.65□□□□□ -1.18
CHMP2B-201ENST00000263780 KMT2BQ9UMN6 2715 aaPredicted RBP7.65□□□□□ -1.19
CHMP2B-201ENST00000263780 C14orf177Q52M58 125 aa7.65□□□□□ -1.19
CHMP2B-201ENST00000263780 PHF5AQ7RTV0 110 aaKnown RBP7.65□□□□□ -1.19
CHMP2B-201ENST00000263780 ASB16-AS1Q495Z4 193 aa7.63□□□□□ -1.19
CHMP2B-201ENST00000263780 Q6ZR54 194 aa7.62□□□□□ -1.19
CHMP2B-201ENST00000263780 ITPR2Q14571 2701 aa7.62□□□□□ -1.19
CHMP2B-201ENST00000263780 PCOTHQ58A44 107 aa7.62□□□□□ -1.19
CHMP2B-201ENST00000263780 A6NN06 94 aa7.61□□□□□ -1.19
CHMP2B-201ENST00000263780 PLAC8Q9NZF1 115 aa7.61□□□□□ -1.19
CHMP2B-201ENST00000263780 TENM1Q9UKZ4 2725 aa7.59□□□□□ -1.19
CHMP2B-201ENST00000263780 C8orf17Q9NRJ1 99 aa7.59□□□□□ -1.19
CHMP2B-201ENST00000263780 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.2
CHMP2B-201ENST00000263780 ATRQ13535 2644 aa7.58□□□□□ -1.2
CHMP2B-201ENST00000263780 RBM12B-AS1Q9P1G2 102 aa7.58□□□□□ -1.2
CHMP2B-201ENST00000263780 TEP1Q99973 2627 aaKnown RBP7.58□□□□□ -1.2
CHMP2B-201ENST00000263780 F8P00451 2351 aa7.58□□□□□ -1.2
CHMP2B-201ENST00000263780 HELZ2Q9BYK8 2649 aaKnown RBP7.58□□□□□ -1.2
CHMP2B-201ENST00000263780 DNAH1Q9P2D7 4330 aa7.57□□□□□ -1.2
CHMP2B-201ENST00000263780 PKD1L1Q8TDX9 2849 aa7.57□□□□□ -1.2
CHMP2B-201ENST00000263780 CDK2AP2O75956 126 aa7.57□□□□□ -1.2
CHMP2B-201ENST00000263780 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
CHMP2B-201ENST00000263780 KRTAP11-1Q8IUC1 163 aa7.56□□□□□ -1.2
CHMP2B-201ENST00000263780 Q96NJ1 140 aa7.55□□□□□ -1.2
CHMP2B-201ENST00000263780 FASNP49327 2511 aaKnown RBP7.55□□□□□ -1.2
CHMP2B-201ENST00000263780 A0A1B0GVX0 72 aa7.54□□□□□ -1.2
CHMP2B-201ENST00000263780 CHTF8P0CG12 524 aa7.54□□□□□ -1.2
CHMP2B-201ENST00000263780 HRES1P13985 223 aa7.53□□□□□ -1.2
CHMP2B-201ENST00000263780 TRRAPQ9Y4A5 3859 aa7.53□□□□□ -1.2
CHMP2B-201ENST00000263780 MRPL34Q9BQ48 92 aaKnown RBP7.53□□□□□ -1.2
CHMP2B-201ENST00000263780 KRTAP13-1Q8IUC0 172 aa7.52□□□□□ -1.21
CHMP2B-201ENST00000263780 NSD1Q96L73 2696 aaPredicted RBP7.51□□□□□ -1.21
CHMP2B-201ENST00000263780 IGHV6-1A0A0B4J1U7 121 aa7.51□□□□□ -1.21
CHMP2B-201ENST00000263780 IGLV9-49A0A0B4J1Y8 123 aa7.5□□□□□ -1.21
CHMP2B-201ENST00000263780 TENM3Q9P273 2699 aa7.5□□□□□ -1.21
CHMP2B-201ENST00000263780 KRTAP1-5Q9BYS1 174 aa7.5□□□□□ -1.21
CHMP2B-201ENST00000263780 ZNF706Q9Y5V0 76 aaPredicted RBP7.5□□□□□ -1.21
CHMP2B-201ENST00000263780 LINC00483Q53H64 154 aa7.49□□□□□ -1.21
CHMP2B-201ENST00000263780 UBE2DNLQ8IWF7 75 aa7.49□□□□□ -1.21
CHMP2B-201ENST00000263780 SPINK7P58062 85 aa7.48□□□□□ -1.21
CHMP2B-201ENST00000263780 HECTD1Q9ULT8 2610 aa7.45□□□□□ -1.22
CHMP2B-201ENST00000263780 ACYP2P14621 99 aa7.45□□□□□ -1.22
CHMP2B-201ENST00000263780 BAHCC1Q9P281 2608 aa7.44□□□□□ -1.22
CHMP2B-201ENST00000263780 MDFIQ99750 246 aa7.42□□□□□ -1.22
CHMP2B-201ENST00000263780 KRTAP24-1Q3LI83 254 aa7.41□□□□□ -1.22
CHMP2B-201ENST00000263780 OTOGQ6ZRI0 2925 aa7.4□□□□□ -1.22
CHMP2B-201ENST00000263780 WWC2-AS2Q96NR7 200 aa7.39□□□□□ -1.23
CHMP2B-201ENST00000263780 PRR26Q8N8Z3 221 aa7.39□□□□□ -1.23
CHMP2B-201ENST00000263780 APLNQ9ULZ1 77 aa7.38□□□□□ -1.23
CHMP2B-201ENST00000263780 FLNBO75369 2602 aaKnown RBP7.38□□□□□ -1.23
CHMP2B-201ENST00000263780 SPACA4Q8TDM5 124 aa7.38□□□□□ -1.23
CHMP2B-201ENST00000263780 K7EIL1 84 aa7.37□□□□□ -1.23
CHMP2B-201ENST00000263780 ANK2Q01484 3957 aa7.36□□□□□ -1.23
CHMP2B-201ENST00000263780 PANO1I0J062 215 aa7.36□□□□□ -1.23
CHMP2B-201ENST00000263780 A0A087X002 238 aa7.36□□□□□ -1.23
CHMP2B-201ENST00000263780 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
CHMP2B-201ENST00000263780 C8orf87E5RJ46 101 aa7.35□□□□□ -1.23
CHMP2B-201ENST00000263780 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
CHMP2B-201ENST00000263780 MAST4O15021 2626 aa7.35□□□□□ -1.23
CHMP2B-201ENST00000263780 TENM2Q9NT68 2774 aa7.34□□□□□ -1.23
CHMP2B-201ENST00000263780 DNAH3Q8TD57 4116 aa7.34□□□□□ -1.23
CHMP2B-201ENST00000263780 SRRM2Q9UQ35 2752 aaKnown RBP7.34□□□□□ -1.23
CHMP2B-201ENST00000263780 Q5W150 140 aa7.34□□□□□ -1.23
CHMP2B-201ENST00000263780 DMAC1Q96GE9 116 aa7.34□□□□□ -1.23
CHMP2B-201ENST00000263780 NBDYA0A0U1RRE5 68 aa7.33□□□□□ -1.24
CHMP2B-201ENST00000263780 ZNF861PO60384 105 aa7.32□□□□□ -1.24
CHMP2B-201ENST00000263780 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.32□□□□□ -1.24
CHMP2B-201ENST00000263780 LINC00313P59037 77 aa7.32□□□□□ -1.24
CHMP2B-201ENST00000263780 IGLV5-52A0A0A0MRZ9 124 aa7.31□□□□□ -1.24
CHMP2B-201ENST00000263780 A0A1B0GU69 56 aa7.31□□□□□ -1.24
CHMP2B-201ENST00000263780 DNAH10Q8IVF4 4471 aa7.31□□□□□ -1.24
CHMP2B-201ENST00000263780 HUWE1Q7Z6Z7 4374 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms